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Fluorine in PDB 3ow2: Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Protein crystallography data

The structure of Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit, PDB code: 3ow2 was solved by Z.F.Kanyo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 211.853, 298.000, 574.985, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 3ow2:

The structure of Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit also contains other interesting chemical elements:

Strontium (Sr) 98 atoms
Magnesium (Mg) 61 atoms
Potassium (K) 1 atom
Cadmium (Cd) 4 atoms
Chlorine (Cl) 13 atoms
Sodium (Na) 26 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit (pdb code 3ow2). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit, PDB code: 3ow2:

Fluorine binding site 1 out of 1 in 3ow2

Go back to Fluorine Binding Sites List in 3ow2
Fluorine binding site 1 out of 1 in the Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit within 5.0Å range:
probe atom residue distance (Å) B Occ
0:F8163

b:47.2
occ:1.00
F1 0:EMK8163 0.0 47.2 1.0
C84 0:EMK8163 1.4 45.7 1.0
C83 0:EMK8163 2.4 45.9 1.0
N81 0:EMK8163 2.8 46.5 1.0
O6 0:G2102 3.2 28.6 1.0
C93 0:EMK8163 3.3 46.1 1.0
K 0:K8056 3.3 88.2 1.0
C6 0:G2102 3.5 28.8 1.0
C1' 0:A2538 3.5 30.2 1.0
O4' 0:A2538 3.7 32.0 1.0
C5 0:G2102 3.7 29.4 1.0
N7 0:G2102 3.7 30.8 1.0
N82 0:EMK8163 3.7 46.5 1.0
C85 0:EMK8163 3.8 45.6 1.0
C8 0:A2538 3.8 30.2 1.0
N9 0:A2538 4.1 29.6 1.0
C5 0:U2539 4.2 56.1 1.0
C4 0:U2539 4.3 57.4 1.0
C95 0:EMK8163 4.3 45.8 1.0
O3' 0:A2538 4.3 32.4 1.0
O96 0:EMK8163 4.3 46.7 1.0
OP2 0:G2540 4.4 40.5 1.0
O4 0:U2539 4.4 56.9 1.0
N1 0:G2102 4.4 28.9 1.0
OP1 0:U2539 4.5 34.1 1.0
C4' 0:A2538 4.5 32.5 1.0
N83 0:EMK8163 4.5 46.2 1.0
C6 0:U2539 4.7 55.1 1.0
C8 0:G2102 4.7 29.7 1.0
C2' 0:A2538 4.7 30.2 1.0
C4 0:G2102 4.7 28.7 1.0
N3 0:U2539 4.8 58.0 1.0
C3' 0:A2538 4.9 30.1 1.0
O2' 0:A2538 4.9 28.8 1.0
C86 0:EMK8163 4.9 45.8 1.0
P 0:U2539 5.0 33.8 1.0
N7 0:A2538 5.0 30.9 1.0

Reference:

Z.F.Kanyo, N/A. N/A N/A.
Page generated: Sun Dec 13 11:52:48 2020

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