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Fluorine in PDB 3p5r: Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate
Enzymatic activity of Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate
All present enzymatic activity of Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate:
4.2.3.17;
4.2.3.17;
Protein crystallography data
The structure of Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate, PDB code: 3p5r
was solved by
M.Koksal,
D.W.Christianson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 43.41 / 2.25 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 54.050, 201.980, 81.431, 90.00, 91.60, 90.00 |
| R / Rfree (%) | 18.7 / 25 |
Other elements in 3p5r:
The structure of Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate also contains other interesting chemical elements:
| Magnesium | (Mg) | 6 atoms |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate
(pdb code 3p5r). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate, PDB code: 3p5r:
Jump to Fluorine binding site number: 1; 2;
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate, PDB code: 3p5r:
Jump to Fluorine binding site number: 1; 2;
Fluorine binding site 1 out of 2 in 3p5r
Go back to
Fluorine Binding Sites List in 3p5r
Fluorine binding site 1 out
of 2 in the Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate within 5.0Å range:
|
Fluorine binding site 2 out of 2 in 3p5r
Go back to
Fluorine Binding Sites List in 3p5r
Fluorine binding site 2 out
of 2 in the Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) in Complex with MG2+ and 2-Fluorogeranylgeranyl Diphosphate within 5.0Å range:
|
Reference:
M.Koksal,
Y.Jin,
R.M.Coates,
R.Croteau,
D.W.Christianson.
Taxadiene Synthase Structure and Evolution of Modular Architecture in Terpene Biosynthesis. Nature V. 469 116 2011.
ISSN: ISSN 0028-0836
PubMed: 21160477
DOI: 10.1038/NATURE09628
Page generated: Sun Dec 13 11:53:04 2020
ISSN: ISSN 0028-0836
PubMed: 21160477
DOI: 10.1038/NATURE09628
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