Atomistry » Fluorine » PDB 3sb0-3sym » 3sls
Atomistry »
  Fluorine »
    PDB 3sb0-3sym »
      3sls »

Fluorine in PDB 3sls: Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp

Enzymatic activity of Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp

All present enzymatic activity of Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp:
2.7.12.2;

Protein crystallography data

The structure of Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp, PDB code: 3sls was solved by C.Meier, T.A.Ceska, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.502, 153.890, 48.209, 90.00, 101.48, 90.00
R / Rfree (%) 20.6 / 28.7

Other elements in 3sls:

The structure of Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Iodine (I) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp (pdb code 3sls). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp, PDB code: 3sls:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 3sls

Go back to Fluorine Binding Sites List in 3sls
Fluorine binding site 1 out of 2 in the Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F500

b:41.6
occ:1.00
F22 A:77D500 0.0 41.6 1.0
C21 A:77D500 1.3 41.9 1.0
C23 A:77D500 2.3 41.6 1.0
C20 A:77D500 2.4 41.8 1.0
N19 A:77D500 2.7 41.4 1.0
OD1 A:ASP208 2.8 37.7 1.0
CE A:MET143 3.4 37.9 1.0
CG2 A:ILE141 3.6 47.2 1.0
C24 A:77D500 3.6 41.7 1.0
C27 A:77D500 3.6 41.1 1.0
CD1 A:ILE141 3.7 47.3 1.0
CD A:LYS97 3.9 49.7 1.0
C18 A:77D500 3.9 41.6 1.0
CB A:ILE141 3.9 47.9 1.0
O17 A:77D500 3.9 37.7 1.0
SD A:MET143 4.0 40.3 1.0
CE A:LYS97 4.0 48.5 1.0
CG A:ASP208 4.1 35.7 1.0
C26 A:77D500 4.1 41.7 1.0
CG1 A:ILE141 4.4 47.5 1.0
NZ A:LYS97 4.4 48.2 1.0
CB A:LYS97 4.6 51.4 1.0
SG A:CYS207 4.6 35.8 0.5
CA A:ASP208 4.7 35.3 1.0
C09 A:77D500 4.7 39.2 1.0
C08 A:77D500 4.7 40.3 1.0
N A:ASP208 4.8 34.7 1.0
OD2 A:ASP208 4.8 37.8 1.0
O A:HOH495 4.8 29.1 1.0
CG A:LYS97 4.9 50.9 1.0
CB A:ASP208 5.0 35.2 1.0
S28 A:77D500 5.0 41.0 1.0

Fluorine binding site 2 out of 2 in 3sls

Go back to Fluorine Binding Sites List in 3sls
Fluorine binding site 2 out of 2 in the Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human Mek-1 Kinase in Complex with UCB1353770 and Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F500

b:40.3
occ:1.00
F22 B:77D500 0.0 40.3 1.0
C21 B:77D500 1.3 41.6 1.0
C23 B:77D500 2.3 41.0 1.0
C20 B:77D500 2.3 41.4 1.0
N19 B:77D500 2.7 41.3 1.0
OD1 B:ASP208 2.8 35.8 1.0
CE B:MET143 3.3 37.2 1.0
C24 B:77D500 3.6 41.4 1.0
C27 B:77D500 3.6 40.9 1.0
CG2 B:ILE141 3.8 46.9 1.0
CD B:LYS97 3.8 48.6 1.0
C18 B:77D500 3.9 40.4 1.0
O17 B:77D500 4.0 35.1 1.0
CD1 B:ILE141 4.0 47.1 1.0
CG B:ASP208 4.0 34.8 1.0
C26 B:77D500 4.1 40.2 1.0
CB B:ILE141 4.1 47.7 1.0
SD B:MET143 4.2 40.2 1.0
SG B:CYS207 4.4 34.3 0.5
CA B:ASP208 4.6 35.2 1.0
O B:HOH18 4.6 38.5 1.0
N B:ASP208 4.6 34.6 1.0
CG1 B:ILE141 4.6 47.6 1.0
CB B:LYS97 4.7 51.4 1.0
NZ B:LYS97 4.7 46.9 1.0
C09 B:77D500 4.7 37.7 1.0
C08 B:77D500 4.7 39.2 1.0
CG B:LYS97 4.8 50.2 1.0
OD2 B:ASP208 4.8 34.6 1.0
CE B:LYS97 4.9 47.5 1.0
CB B:ASP208 4.9 35.2 1.0
S28 B:77D500 4.9 41.6 1.0

Reference:

C.Meier, D.C.Brookings, T.A.Ceska, C.Doyle, H.Gong, D.Mcmillan, G.P.Saville, A.Mushtaq, D.Knight, S.Reich, L.H.Pearl, K.A.Powell, R.Savva, R.A.Allen. Engineering Human Mek-1 For Structural Studies: A Case Study of Combinatorial Domain Hunting. J.Struct.Biol. V. 177 329 2012.
ISSN: ISSN 1047-8477
PubMed: 22245778
DOI: 10.1016/J.JSB.2012.01.002
Page generated: Wed Jul 31 22:34:20 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy