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Fluorine in PDB 3u6h: Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26

Enzymatic activity of Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26

All present enzymatic activity of Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26:
2.7.10.1;

Protein crystallography data

The structure of Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26, PDB code: 3u6h was solved by S.F.Bellon, D.A.Whittington, A.L.Long, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.71 / 2.00
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 71.610, 81.970, 127.038, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 27.4

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26 (pdb code 3u6h). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26, PDB code: 3u6h:

Fluorine binding site 1 out of 1 in 3u6h

Go back to Fluorine Binding Sites List in 3u6h
Fluorine binding site 1 out of 1 in the Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of C-Met in Complex with Pyrazolone Inhibitor 26 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1

b:25.8
occ:1.00
F1 A:03X1 0.0 25.8 1.0
C13 A:03X1 1.3 24.1 1.0
C10 A:03X1 2.4 23.9 1.0
C14 A:03X1 2.4 23.8 1.0
O1 A:03X1 2.7 23.2 1.0
CG2 A:VAL1092 3.2 24.4 1.0
CG1 A:VAL1092 3.4 22.5 1.0
C9 A:03X1 3.5 22.1 1.0
C17 A:03X1 3.6 23.9 1.0
C15 A:03X1 3.6 23.3 1.0
CB A:PHE1089 3.8 35.2 1.0
C8 A:03X1 3.9 22.7 1.0
CB A:VAL1092 3.9 25.1 1.0
CD1 A:LEU1157 3.9 23.3 1.0
CB A:LYS1110 4.0 23.5 1.0
C16 A:03X1 4.1 23.6 1.0
O A:PHE1089 4.2 36.1 1.0
CG A:LYS1110 4.5 23.4 1.0
CD A:LYS1110 4.5 24.3 1.0
CG A:PHE1089 4.5 33.8 1.0
C5 A:03X1 4.6 22.7 1.0
CB A:ALA1108 4.7 20.3 1.0
N2 A:03X1 4.7 24.0 1.0
C A:PHE1089 4.8 36.1 1.0
CA A:LYS1110 4.9 23.2 1.0
C4 A:03X1 4.9 22.8 1.0
CA A:PHE1089 5.0 36.2 1.0

Reference:

M.H.Norman, L.Liu, M.Lee, N.Xi, I.Fellows, N.D.D'angelo, C.Dominguez, K.Rex, S.F.Bellon, T.S.Kim, I.Dussault. Structure-Based Design of Novel Class II C-Met Inhibitors: 1. Identification of Pyrazolone-Based Derivatives. J.Med.Chem. V. 55 1858 2012.
ISSN: ISSN 0022-2623
PubMed: 22320343
DOI: 10.1021/JM201330U
Page generated: Wed Jul 31 23:00:28 2024

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