Fluorine in PDB 3vob: Staphylococcus Aureus Ftsz with PC190723

The structure of Staphylococcus Aureus Ftsz with PC190723, PDB code: 3vob was solved by J.Yamane, T.Matsui, N.Mogi, H.Yamaguchi, H.Takemoto, M.Yao, I.Tanaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.35 / 2.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	72.095, 50.507, 88.288, 90.00, 110.95, 90.00
R / Rfree (%)	19.5 / 24.7

The structure of Staphylococcus Aureus Ftsz with PC190723 also contains other interesting chemical elements:

Calcium	(Ca)	1 atom
Chlorine	(Cl)	1 atom

The binding sites of Fluorine atom in the Staphylococcus Aureus Ftsz with PC190723 (pdb code 3vob). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Staphylococcus Aureus Ftsz with PC190723, PDB code: 3vob:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in the Staphylococcus Aureus Ftsz with PC190723


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Staphylococcus Aureus Ftsz with PC190723 within 5.0Å range: probe atom residue distance (Å) B Occ A:F403 b:29.3 occ:1.00 F1 A:9PC403 0.0 29.3 1.0 C13 A:9PC403 1.3 26.5 1.0 C1 A:9PC403 2.4 30.7 1.0 C5 A:9PC403 2.4 28.4 1.0 O1 A:9PC403 2.8 31.6 1.0 C A:9PC403 2.9 31.8 1.0 CD1 A:LEU209 3.1 22.4 1.0 CG A:ASN263 3.1 26.3 1.0 CB A:ASN263 3.2 21.1 1.0 OD1 A:ASN263 3.2 26.4 1.0 N A:9PC403 3.3 26.2 1.0 CD1 A:LEU200 3.4 26.9 1.0 CG A:LEU200 3.6 27.4 1.0 O A:9PC403 3.7 29.6 1.0 C4 A:9PC403 3.7 28.2 1.0 ND2 A:ASN263 3.7 27.4 1.0 CB A:LEU209 3.7 23.6 1.0 CG A:LEU209 3.7 21.5 1.0 C2 A:9PC403 3.8 31.2 1.0 CB A:LEU200 4.0 25.2 1.0 C3 A:9PC403 4.2 29.2 1.0 C6 A:9PC403 4.2 32.5 1.0 CA A:LEU200 4.4 26.7 1.0 CA A:ASN263 4.6 19.0 1.0 S A:9PC403 4.7 35.9 1.0 CA A:LEU209 4.8 23.7 1.0 N A:LEU209 4.9 25.0 1.0 F A:9PC403 4.9 31.7 1.0 CD2 A:LEU261 4.9 18.1 1.0 CG2 A:VAL297 5.0 26.7 1.0 C7 A:9PC403 5.0 34.5 1.0

Fluorine binding site 2 out of 2 in the Staphylococcus Aureus Ftsz with PC190723


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Staphylococcus Aureus Ftsz with PC190723 within 5.0Å range: probe atom residue distance (Å) B Occ A:F403 b:31.7 occ:1.00 F A:9PC403 0.0 31.7 1.0 C2 A:9PC403 1.3 31.2 1.0 C3 A:9PC403 2.4 29.2 1.0 C1 A:9PC403 2.5 30.7 1.0 C A:9PC403 3.0 31.8 1.0 O A:VAL203 3.3 28.7 1.0 O A:9PC403 3.4 29.6 1.0 CG2 A:VAL297 3.5 26.7 1.0 CB A:VAL203 3.5 27.1 1.0 N A:GLY205 3.5 24.1 1.0 CG1 A:VAL297 3.6 28.2 1.0 C4 A:9PC403 3.7 28.2 1.0 CG1 A:VAL203 3.7 17.1 1.0 N A:9PC403 3.8 26.2 1.0 CA A:GLY205 3.8 25.9 1.0 C13 A:9PC403 3.8 26.5 1.0 C A:VAL203 3.8 26.9 1.0 CB A:VAL297 4.2 29.5 1.0 CA A:VAL203 4.2 25.7 1.0 C5 A:9PC403 4.2 28.4 1.0 C A:SER204 4.2 22.8 1.0 CA A:CA401 4.4 40.5 1.0 O A:LEU200 4.4 27.3 1.0 N A:SER204 4.5 25.2 1.0 CG2 A:VAL203 4.7 23.1 1.0 O A:ASP199 4.7 26.6 1.0 CA A:LEU200 4.7 26.7 1.0 CA A:SER204 4.7 21.3 1.0 OD1 A:ASN208 4.7 22.6 1.0 N A:VAL203 4.8 23.6 1.0 F1 A:9PC403 4.9 29.3 1.0 O A:SER204 4.9 25.4 1.0

T.Matsui, J.Yamane, N.Mogi, H.Yamaguchi, H.Takemoto, M.Yao, I.Tanaka. Structural Reorganization of the Bacterial Cell-Division Protein Ftsz From Staphylococcus Aureus Acta Crystallogr.,Sect.D V. 68 1175 2012.
ISSN: ISSN 0907-4449
PubMed: 22948918
DOI: 10.1107/S0907444912022640