Fluorine in PDB 3zq6: Adp-ALF4 Complex of M. Therm. TRC40
Enzymatic activity of Adp-ALF4 Complex of M. Therm. TRC40
All present enzymatic activity of Adp-ALF4 Complex of M. Therm. TRC40:
3.6.3.16;
Protein crystallography data
The structure of Adp-ALF4 Complex of M. Therm. TRC40, PDB code: 3zq6
was solved by
J.Sherrill,
M.Mariappan,
P.Dominik,
R.S.Hegde,
R.J.Keenan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
41.206 /
2.11
|
|
Space group
|
C 1 2 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
206.948,
49.768,
147.363,
90.00,
115.04,
90.00
|
|
R / Rfree (%)
|
17.3 /
22.14
|
Other elements in 3zq6:
The structure of Adp-ALF4 Complex of M. Therm. TRC40 also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
16;
Binding sites:
The binding sites of Fluorine atom in the Adp-ALF4 Complex of M. Therm. TRC40
(pdb code 3zq6). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 16 binding sites of Fluorine where determined in the
Adp-ALF4 Complex of M. Therm. TRC40, PDB code: 3zq6:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 1 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:19.7
occ:1.00
|
F1
|
A:ALF402
|
0.0
|
19.7
|
1.0
|
|
AL
|
A:ALF402
|
1.7
|
16.4
|
1.0
|
|
F4
|
A:ALF402
|
2.3
|
18.6
|
1.0
|
|
O1B
|
A:ADP401
|
2.5
|
14.6
|
1.0
|
|
F3
|
A:ALF402
|
2.5
|
17.3
|
1.0
|
|
O
|
A:HOH2030
|
2.8
|
15.1
|
1.0
|
|
N
|
B:GLY23
|
2.8
|
16.5
|
1.0
|
|
CA
|
B:GLY23
|
3.0
|
14.5
|
1.0
|
|
NZ
|
B:LYS22
|
3.0
|
18.5
|
1.0
|
|
N
|
A:GLY24
|
3.3
|
12.6
|
1.0
|
|
CG
|
B:LYS22
|
3.3
|
17.2
|
1.0
|
|
O
|
B:GLY23
|
3.5
|
12.5
|
1.0
|
|
F2
|
A:ALF402
|
3.5
|
18.2
|
1.0
|
|
C
|
B:GLY23
|
3.7
|
18.8
|
1.0
|
|
O
|
B:HOH2016
|
3.8
|
20.1
|
1.0
|
|
CE
|
B:LYS22
|
3.8
|
12.0
|
1.0
|
|
CA
|
A:GLY24
|
3.8
|
9.8
|
1.0
|
|
C
|
B:LYS22
|
4.0
|
15.0
|
1.0
|
|
PB
|
A:ADP401
|
4.0
|
15.4
|
1.0
|
|
CD
|
B:LYS22
|
4.1
|
11.3
|
1.0
|
|
C
|
A:GLY23
|
4.2
|
17.0
|
1.0
|
|
CA
|
A:GLY23
|
4.2
|
10.5
|
1.0
|
|
O
|
B:HOH2015
|
4.3
|
21.1
|
1.0
|
|
CB
|
B:LYS22
|
4.4
|
17.6
|
1.0
|
|
K
|
A:K404
|
4.5
|
23.1
|
1.0
|
|
CA
|
B:LYS22
|
4.5
|
15.1
|
1.0
|
|
O
|
A:HOH4003
|
4.5
|
16.8
|
1.0
|
|
O3A
|
A:ADP401
|
4.7
|
14.8
|
1.0
|
|
O3B
|
A:ADP401
|
4.8
|
17.6
|
1.0
|
|
CG
|
A:PRO148
|
4.8
|
14.5
|
1.0
|
|
O
|
B:LYS22
|
4.9
|
16.0
|
1.0
|
|
O2B
|
A:ADP401
|
4.9
|
15.2
|
1.0
|
|
N
|
B:GLY24
|
4.9
|
15.6
|
1.0
|
|
MG
|
A:MG403
|
5.0
|
17.5
|
1.0
|
|
Fluorine binding site 2 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 2 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:18.2
occ:1.00
|
F2
|
A:ALF402
|
0.0
|
18.2
|
1.0
|
|
AL
|
A:ALF402
|
1.8
|
16.4
|
1.0
|
|
MG
|
A:MG403
|
2.0
|
17.5
|
1.0
|
|
O1B
|
A:ADP401
|
2.5
|
14.6
|
1.0
|
|
F4
|
A:ALF402
|
2.5
|
18.6
|
1.0
|
|
F3
|
A:ALF402
|
2.6
|
17.3
|
1.0
|
|
O
|
A:HOH2030
|
2.7
|
15.1
|
1.0
|
|
O2B
|
A:ADP401
|
2.8
|
15.2
|
1.0
|
|
O
|
A:HOH4002
|
2.8
|
13.1
|
1.0
|
|
O
|
A:HOH4001
|
2.8
|
18.4
|
1.0
|
|
PB
|
A:ADP401
|
3.1
|
15.4
|
1.0
|
|
O
|
A:HOH4003
|
3.1
|
16.8
|
1.0
|
|
OD2
|
A:ASP51
|
3.2
|
18.1
|
1.0
|
|
F1
|
A:ALF402
|
3.5
|
19.7
|
1.0
|
|
CE
|
A:LYS27
|
3.5
|
13.7
|
1.0
|
|
NZ
|
A:LYS27
|
3.6
|
14.9
|
1.0
|
|
O3B
|
A:ADP401
|
3.8
|
17.6
|
1.0
|
|
K
|
A:K404
|
4.0
|
23.1
|
1.0
|
|
OG1
|
A:THR28
|
4.1
|
13.8
|
1.0
|
|
O
|
A:THR146
|
4.3
|
14.7
|
1.0
|
|
O3A
|
A:ADP401
|
4.4
|
14.8
|
1.0
|
|
CG
|
A:ASP51
|
4.4
|
23.0
|
1.0
|
|
CD
|
A:PRO148
|
4.5
|
15.5
|
1.0
|
|
CG
|
A:PRO148
|
4.7
|
14.5
|
1.0
|
|
CB
|
A:LYS27
|
4.7
|
17.6
|
1.0
|
|
CD
|
A:LYS27
|
4.9
|
15.6
|
1.0
|
|
NZ
|
B:LYS22
|
4.9
|
18.5
|
1.0
|
|
CB
|
A:ASP51
|
5.0
|
15.5
|
1.0
|
|
O2A
|
A:ADP401
|
5.0
|
16.1
|
1.0
|
|
Fluorine binding site 3 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 3 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:17.3
occ:1.00
|
F3
|
A:ALF402
|
0.0
|
17.3
|
1.0
|
|
AL
|
A:ALF402
|
1.8
|
16.4
|
1.0
|
|
F1
|
A:ALF402
|
2.5
|
19.7
|
1.0
|
|
O1B
|
A:ADP401
|
2.5
|
14.6
|
1.0
|
|
F2
|
A:ALF402
|
2.6
|
18.2
|
1.0
|
|
NZ
|
A:LYS27
|
2.7
|
14.9
|
1.0
|
|
O
|
A:HOH2030
|
2.8
|
15.1
|
1.0
|
|
N
|
A:GLY24
|
3.0
|
12.6
|
1.0
|
|
CA
|
A:GLY23
|
3.1
|
10.5
|
1.0
|
|
CG
|
A:PRO148
|
3.2
|
14.5
|
1.0
|
|
PB
|
A:ADP401
|
3.4
|
15.4
|
1.0
|
|
CE
|
A:LYS27
|
3.4
|
13.7
|
1.0
|
|
O3B
|
A:ADP401
|
3.4
|
17.6
|
1.0
|
|
F4
|
A:ALF402
|
3.5
|
18.6
|
1.0
|
|
C
|
A:GLY23
|
3.5
|
17.0
|
1.0
|
|
CD
|
A:PRO148
|
3.8
|
15.5
|
1.0
|
|
O
|
A:LYS22
|
4.0
|
18.6
|
1.0
|
|
CA
|
A:GLY24
|
4.1
|
9.8
|
1.0
|
|
N
|
A:GLY23
|
4.1
|
12.3
|
1.0
|
|
O2B
|
A:ADP401
|
4.2
|
15.2
|
1.0
|
|
CA
|
B:GLY23
|
4.2
|
14.5
|
1.0
|
|
CB
|
A:PRO148
|
4.2
|
17.5
|
1.0
|
|
MG
|
A:MG403
|
4.4
|
17.5
|
1.0
|
|
C
|
A:LYS22
|
4.5
|
11.4
|
1.0
|
|
N
|
A:PRO148
|
4.5
|
14.8
|
1.0
|
|
CA
|
A:PRO148
|
4.6
|
20.9
|
1.0
|
|
N
|
B:GLY23
|
4.6
|
16.5
|
1.0
|
|
O3A
|
A:ADP401
|
4.7
|
14.8
|
1.0
|
|
OD2
|
A:ASP51
|
4.8
|
18.1
|
1.0
|
|
O
|
A:GLY23
|
4.8
|
14.1
|
1.0
|
|
C
|
B:GLY23
|
4.9
|
18.8
|
1.0
|
|
CD
|
A:LYS27
|
4.9
|
15.6
|
1.0
|
|
O
|
B:HOH2016
|
4.9
|
20.1
|
1.0
|
|
O
|
A:HOH4001
|
4.9
|
18.4
|
1.0
|
|
NZ
|
B:LYS22
|
5.0
|
18.5
|
1.0
|
|
Fluorine binding site 4 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 4 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:18.6
occ:1.00
|
F4
|
A:ALF402
|
0.0
|
18.6
|
1.0
|
|
AL
|
A:ALF402
|
1.7
|
16.4
|
1.0
|
|
F1
|
A:ALF402
|
2.3
|
19.7
|
1.0
|
|
O1B
|
A:ADP401
|
2.5
|
14.6
|
1.0
|
|
O
|
A:HOH4003
|
2.5
|
16.8
|
1.0
|
|
F2
|
A:ALF402
|
2.5
|
18.2
|
1.0
|
|
O
|
A:HOH2030
|
2.7
|
15.1
|
1.0
|
|
K
|
A:K404
|
2.7
|
23.1
|
1.0
|
|
NZ
|
B:LYS22
|
2.9
|
18.5
|
1.0
|
|
CE
|
B:LYS22
|
3.1
|
12.0
|
1.0
|
|
MG
|
A:MG403
|
3.3
|
17.5
|
1.0
|
|
O
|
A:HOH4002
|
3.5
|
13.1
|
1.0
|
|
F3
|
A:ALF402
|
3.5
|
17.3
|
1.0
|
|
CG
|
B:LYS22
|
3.7
|
17.2
|
1.0
|
|
PB
|
A:ADP401
|
3.8
|
15.4
|
1.0
|
|
O
|
B:HOH2016
|
3.9
|
20.1
|
1.0
|
|
O2B
|
A:ADP401
|
3.9
|
15.2
|
1.0
|
|
OG
|
A:SER55
|
3.9
|
16.5
|
1.0
|
|
OD2
|
A:ASP51
|
4.0
|
18.1
|
1.0
|
|
CD
|
B:LYS22
|
4.0
|
11.3
|
1.0
|
|
O2A
|
A:ADP401
|
4.1
|
16.1
|
1.0
|
|
OE1
|
B:GLU238
|
4.2
|
18.2
|
1.0
|
|
O3A
|
A:ADP401
|
4.4
|
14.8
|
1.0
|
|
CB
|
A:SER55
|
4.6
|
19.9
|
1.0
|
|
N
|
B:GLY23
|
4.7
|
16.5
|
1.0
|
|
OE2
|
B:GLU238
|
5.0
|
19.7
|
1.0
|
|
O3B
|
A:ADP401
|
5.0
|
17.6
|
1.0
|
|
PA
|
A:ADP401
|
5.0
|
17.1
|
1.0
|
|
CD
|
B:GLU238
|
5.0
|
26.4
|
1.0
|
|
Fluorine binding site 5 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 5 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:19.2
occ:1.00
|
F1
|
B:ALF402
|
0.0
|
19.2
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
17.1
|
1.0
|
|
F4
|
B:ALF402
|
2.5
|
20.3
|
1.0
|
|
F3
|
B:ALF402
|
2.5
|
19.2
|
1.0
|
|
O1B
|
B:ADP401
|
2.6
|
11.9
|
1.0
|
|
O
|
B:HOH2027
|
2.7
|
11.1
|
1.0
|
|
N
|
A:GLY23
|
2.8
|
12.3
|
1.0
|
|
NZ
|
A:LYS22
|
2.9
|
16.8
|
1.0
|
|
CA
|
A:GLY23
|
2.9
|
10.5
|
1.0
|
|
CG
|
A:LYS22
|
3.2
|
16.8
|
1.0
|
|
N
|
B:GLY24
|
3.3
|
15.6
|
1.0
|
|
O
|
A:GLY23
|
3.4
|
14.1
|
1.0
|
|
F2
|
B:ALF402
|
3.5
|
18.6
|
1.0
|
|
C
|
A:GLY23
|
3.6
|
17.0
|
1.0
|
|
CE
|
A:LYS22
|
3.7
|
22.4
|
1.0
|
|
O
|
A:HOH2017
|
3.7
|
17.4
|
1.0
|
|
CA
|
B:GLY24
|
3.9
|
10.2
|
1.0
|
|
C
|
A:LYS22
|
3.9
|
11.4
|
1.0
|
|
CD
|
A:LYS22
|
4.0
|
15.1
|
1.0
|
|
PB
|
B:ADP401
|
4.1
|
15.1
|
1.0
|
|
C
|
B:GLY23
|
4.1
|
18.8
|
1.0
|
|
O
|
A:HOH2015
|
4.1
|
22.9
|
1.0
|
|
CA
|
B:GLY23
|
4.2
|
14.5
|
1.0
|
|
CB
|
A:LYS22
|
4.4
|
13.0
|
1.0
|
|
CA
|
A:LYS22
|
4.5
|
12.0
|
1.0
|
|
K
|
B:K404
|
4.5
|
22.9
|
1.0
|
|
O
|
B:HOH4003
|
4.6
|
17.0
|
1.0
|
|
O3B
|
B:ADP401
|
4.8
|
16.1
|
1.0
|
|
N
|
A:GLY24
|
4.8
|
12.6
|
1.0
|
|
O3A
|
B:ADP401
|
4.8
|
17.4
|
1.0
|
|
O
|
A:LYS22
|
4.9
|
18.6
|
1.0
|
|
CG
|
B:PRO148
|
4.9
|
21.4
|
1.0
|
|
O2B
|
B:ADP401
|
5.0
|
13.8
|
1.0
|
|
Fluorine binding site 6 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 6 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:18.6
occ:1.00
|
F2
|
B:ALF402
|
0.0
|
18.6
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
17.1
|
1.0
|
|
MG
|
B:MG403
|
2.0
|
17.6
|
1.0
|
|
F4
|
B:ALF402
|
2.5
|
20.3
|
1.0
|
|
O1B
|
B:ADP401
|
2.5
|
11.9
|
1.0
|
|
F3
|
B:ALF402
|
2.6
|
19.2
|
1.0
|
|
O
|
B:HOH2027
|
2.6
|
11.1
|
1.0
|
|
O2B
|
B:ADP401
|
2.8
|
13.8
|
1.0
|
|
O
|
B:HOH4002
|
2.9
|
16.3
|
1.0
|
|
O
|
B:HOH4001
|
2.9
|
17.8
|
1.0
|
|
O
|
B:HOH4003
|
3.1
|
17.0
|
1.0
|
|
PB
|
B:ADP401
|
3.1
|
15.1
|
1.0
|
|
OD2
|
B:ASP51
|
3.3
|
25.2
|
1.0
|
|
F1
|
B:ALF402
|
3.5
|
19.2
|
1.0
|
|
CE
|
B:LYS27
|
3.5
|
14.1
|
1.0
|
|
NZ
|
B:LYS27
|
3.7
|
18.1
|
1.0
|
|
O3B
|
B:ADP401
|
3.8
|
16.1
|
1.0
|
|
K
|
B:K404
|
3.9
|
22.9
|
1.0
|
|
OG1
|
B:THR28
|
4.1
|
16.1
|
1.0
|
|
O
|
B:THR146
|
4.4
|
20.7
|
1.0
|
|
O3A
|
B:ADP401
|
4.4
|
17.4
|
1.0
|
|
CG
|
B:ASP51
|
4.4
|
24.1
|
1.0
|
|
CD
|
B:PRO148
|
4.6
|
17.9
|
1.0
|
|
CG
|
B:PRO148
|
4.7
|
21.4
|
1.0
|
|
NZ
|
A:LYS22
|
4.7
|
16.8
|
1.0
|
|
CB
|
B:LYS27
|
4.9
|
9.4
|
1.0
|
|
CD
|
B:LYS27
|
4.9
|
14.3
|
1.0
|
|
O2A
|
B:ADP401
|
4.9
|
13.9
|
1.0
|
|
N
|
B:GLY24
|
5.0
|
15.6
|
1.0
|
|
O
|
A:HOH2017
|
5.0
|
17.4
|
1.0
|
|
CB
|
B:ASP51
|
5.0
|
21.8
|
1.0
|
|
Fluorine binding site 7 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 7 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:19.2
occ:1.00
|
F3
|
B:ALF402
|
0.0
|
19.2
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
17.1
|
1.0
|
|
F1
|
B:ALF402
|
2.5
|
19.2
|
1.0
|
|
F2
|
B:ALF402
|
2.6
|
18.6
|
1.0
|
|
O1B
|
B:ADP401
|
2.6
|
11.9
|
1.0
|
|
NZ
|
B:LYS27
|
2.7
|
18.1
|
1.0
|
|
O
|
B:HOH2027
|
2.7
|
11.1
|
1.0
|
|
N
|
B:GLY24
|
2.9
|
15.6
|
1.0
|
|
CA
|
B:GLY23
|
3.1
|
14.5
|
1.0
|
|
CG
|
B:PRO148
|
3.3
|
21.4
|
1.0
|
|
PB
|
B:ADP401
|
3.4
|
15.1
|
1.0
|
|
O3B
|
B:ADP401
|
3.4
|
16.1
|
1.0
|
|
CE
|
B:LYS27
|
3.4
|
14.1
|
1.0
|
|
C
|
B:GLY23
|
3.5
|
18.8
|
1.0
|
|
F4
|
B:ALF402
|
3.6
|
20.3
|
1.0
|
|
CA
|
A:GLY23
|
4.1
|
10.5
|
1.0
|
|
CD
|
B:PRO148
|
4.1
|
17.9
|
1.0
|
|
O
|
B:LYS22
|
4.1
|
16.0
|
1.0
|
|
CA
|
B:GLY24
|
4.1
|
10.2
|
1.0
|
|
N
|
B:GLY23
|
4.1
|
16.5
|
1.0
|
|
O2B
|
B:ADP401
|
4.2
|
13.8
|
1.0
|
|
CB
|
B:PRO148
|
4.2
|
15.8
|
1.0
|
|
MG
|
B:MG403
|
4.4
|
17.6
|
1.0
|
|
C
|
B:LYS22
|
4.5
|
15.0
|
1.0
|
|
N
|
A:GLY23
|
4.6
|
12.3
|
1.0
|
|
CA
|
B:PRO148
|
4.7
|
19.7
|
1.0
|
|
O
|
B:GLY23
|
4.7
|
12.5
|
1.0
|
|
N
|
B:PRO148
|
4.7
|
19.0
|
1.0
|
|
OD2
|
B:ASP51
|
4.8
|
25.2
|
1.0
|
|
O3A
|
B:ADP401
|
4.8
|
17.4
|
1.0
|
|
C
|
A:GLY23
|
4.8
|
17.0
|
1.0
|
|
NZ
|
A:LYS22
|
4.9
|
16.8
|
1.0
|
|
CD
|
B:LYS27
|
4.9
|
14.3
|
1.0
|
|
O
|
A:HOH2017
|
4.9
|
17.4
|
1.0
|
|
O
|
B:HOH4001
|
5.0
|
17.8
|
1.0
|
|
Fluorine binding site 8 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 8 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:20.3
occ:1.00
|
F4
|
B:ALF402
|
0.0
|
20.3
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
17.1
|
1.0
|
|
F1
|
B:ALF402
|
2.5
|
19.2
|
1.0
|
|
O
|
B:HOH4003
|
2.5
|
17.0
|
1.0
|
|
F2
|
B:ALF402
|
2.5
|
18.6
|
1.0
|
|
O1B
|
B:ADP401
|
2.5
|
11.9
|
1.0
|
|
O
|
B:HOH2027
|
2.7
|
11.1
|
1.0
|
|
K
|
B:K404
|
2.7
|
22.9
|
1.0
|
|
NZ
|
A:LYS22
|
2.8
|
16.8
|
1.0
|
|
CE
|
A:LYS22
|
3.0
|
22.4
|
1.0
|
|
MG
|
B:MG403
|
3.2
|
17.6
|
1.0
|
|
O
|
B:HOH4002
|
3.5
|
16.3
|
1.0
|
|
F3
|
B:ALF402
|
3.6
|
19.2
|
1.0
|
|
CG
|
A:LYS22
|
3.8
|
16.8
|
1.0
|
|
PB
|
B:ADP401
|
3.8
|
15.1
|
1.0
|
|
OG
|
B:SER55
|
3.9
|
21.0
|
1.0
|
|
O
|
A:HOH2017
|
3.9
|
17.4
|
1.0
|
|
O2B
|
B:ADP401
|
3.9
|
13.8
|
1.0
|
|
CD
|
A:LYS22
|
4.0
|
15.1
|
1.0
|
|
O2A
|
B:ADP401
|
4.0
|
13.9
|
1.0
|
|
OD2
|
B:ASP51
|
4.0
|
25.2
|
1.0
|
|
OE1
|
A:GLU238
|
4.3
|
18.6
|
1.0
|
|
O3A
|
B:ADP401
|
4.5
|
17.4
|
1.0
|
|
CB
|
B:SER55
|
4.6
|
22.3
|
1.0
|
|
N
|
A:GLY23
|
4.8
|
12.3
|
1.0
|
|
OG1
|
B:THR28
|
5.0
|
16.1
|
1.0
|
|
PA
|
B:ADP401
|
5.0
|
15.5
|
1.0
|
|
O3B
|
B:ADP401
|
5.0
|
16.1
|
1.0
|
|
Fluorine binding site 9 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 9 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F402
b:36.3
occ:1.00
|
F1
|
C:ALF402
|
0.0
|
36.3
|
1.0
|
|
AL
|
C:ALF402
|
1.8
|
29.9
|
1.0
|
|
F4
|
C:ALF402
|
2.4
|
35.2
|
1.0
|
|
F3
|
C:ALF402
|
2.5
|
28.2
|
1.0
|
|
O1B
|
C:ADP401
|
2.6
|
27.7
|
1.0
|
|
O
|
C:HOH2019
|
2.8
|
28.6
|
1.0
|
|
N
|
D:GLY23
|
2.8
|
33.9
|
1.0
|
|
CA
|
D:GLY23
|
2.9
|
34.2
|
1.0
|
|
NZ
|
D:LYS22
|
3.2
|
38.6
|
1.0
|
|
N
|
C:GLY24
|
3.2
|
32.8
|
1.0
|
|
CG
|
D:LYS22
|
3.3
|
28.9
|
1.0
|
|
O
|
D:GLY23
|
3.4
|
33.6
|
1.0
|
|
C
|
D:GLY23
|
3.5
|
32.2
|
1.0
|
|
F2
|
C:ALF402
|
3.5
|
27.9
|
1.0
|
|
CA
|
C:GLY24
|
3.7
|
30.9
|
1.0
|
|
O
|
D:HOH2022
|
3.9
|
30.5
|
1.0
|
|
CE
|
D:LYS22
|
3.9
|
37.3
|
1.0
|
|
C
|
D:LYS22
|
4.0
|
32.1
|
1.0
|
|
PB
|
C:ADP401
|
4.1
|
28.0
|
1.0
|
|
C
|
C:GLY23
|
4.1
|
33.4
|
1.0
|
|
CD
|
D:LYS22
|
4.3
|
34.5
|
1.0
|
|
CA
|
C:GLY23
|
4.3
|
25.9
|
1.0
|
|
O
|
D:HOH2004
|
4.4
|
40.8
|
1.0
|
|
CB
|
D:LYS22
|
4.5
|
35.0
|
1.0
|
|
K
|
C:K404
|
4.6
|
40.1
|
1.0
|
|
O3B
|
C:ADP401
|
4.6
|
33.6
|
1.0
|
|
CA
|
D:LYS22
|
4.6
|
32.2
|
1.0
|
|
O
|
C:HOH4003
|
4.6
|
39.2
|
1.0
|
|
N
|
D:GLY24
|
4.7
|
34.0
|
1.0
|
|
CG
|
C:PRO148
|
4.8
|
37.1
|
1.0
|
|
O3A
|
C:ADP401
|
4.8
|
34.6
|
1.0
|
|
O2B
|
C:ADP401
|
4.9
|
24.4
|
1.0
|
|
O
|
D:LYS22
|
4.9
|
29.6
|
1.0
|
|
NZ
|
C:LYS27
|
5.0
|
27.6
|
1.0
|
|
Fluorine binding site 10 out
of 16 in 3zq6
Go back to
Fluorine Binding Sites List in 3zq6
Fluorine binding site 10 out
of 16 in the Adp-ALF4 Complex of M. Therm. TRC40
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Adp-ALF4 Complex of M. Therm. TRC40 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F402
b:27.9
occ:1.00
|
F2
|
C:ALF402
|
0.0
|
27.9
|
1.0
|
|
AL
|
C:ALF402
|
1.8
|
29.9
|
1.0
|
|
MG
|
C:MG403
|
2.0
|
31.8
|
1.0
|
|
F4
|
C:ALF402
|
2.5
|
35.2
|
1.0
|
|
O1B
|
C:ADP401
|
2.5
|
27.7
|
1.0
|
|
O
|
C:HOH2019
|
2.5
|
28.6
|
1.0
|
|
F3
|
C:ALF402
|
2.6
|
28.2
|
1.0
|
|
O
|
C:HOH4002
|
2.8
|
31.6
|
1.0
|
|
O2B
|
C:ADP401
|
2.8
|
24.4
|
1.0
|
|
O
|
C:HOH4001
|
2.9
|
31.6
|
1.0
|
|
O
|
C:HOH4003
|
3.1
|
39.2
|
1.0
|
|
OD2
|
C:ASP51
|
3.1
|
34.5
|
1.0
|
|
PB
|
C:ADP401
|
3.2
|
28.0
|
1.0
|
|
F1
|
C:ALF402
|
3.5
|
36.3
|
1.0
|
|
NZ
|
C:LYS27
|
3.7
|
27.6
|
1.0
|
|
CE
|
C:LYS27
|
3.8
|
29.1
|
1.0
|
|
O3B
|
C:ADP401
|
3.8
|
33.6
|
1.0
|
|
K
|
C:K404
|
3.9
|
40.1
|
1.0
|
|
OG1
|
C:THR28
|
4.1
|
30.4
|
1.0
|
|
CG
|
C:ASP51
|
4.3
|
35.4
|
1.0
|
|
O
|
C:THR146
|
4.4
|
29.6
|
1.0
|
|
O3A
|
C:ADP401
|
4.5
|
34.6
|
1.0
|
|
CD
|
C:PRO148
|
4.6
|
35.7
|
1.0
|
|
CG
|
C:PRO148
|
4.7
|
37.1
|
1.0
|
|
CB
|
C:ASP51
|
4.9
|
22.4
|
1.0
|
|
NZ
|
D:LYS22
|
5.0
|
38.6
|
1.0
|
|
O
|
D:HOH2022
|
5.0
|
30.5
|
1.0
|
|
O2A
|
C:ADP401
|
5.0
|
30.6
|
1.0
|
|
Reference:
J.Sherrill,
M.Mariappan,
P.Dominik,
R.S.Hegde,
R.J.Keenan.
A Conserved Archaeal Pathway For Tail-Anchored Membrane Protein Insertion. Traffic V. 12 1119 2011.
ISSN: ISSN 1398-9219
PubMed: 21658170
DOI: 10.1111/J.1600-0854.2011.01229.X
Page generated: Wed Jul 31 23:48:22 2024
|
