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Fluorine in PDB 3zse: 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca

Enzymatic activity of 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca

All present enzymatic activity of 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca:
3.2.1.8;

Protein crystallography data

The structure of 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca, PDB code: 3zse was solved by A.Lammerts Van Bueren, S.Otani, E.P.Friis, K.S Wilson, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.29 / 1.78
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.630, 41.310, 93.970, 90.00, 90.00, 90.00
R / Rfree (%) 19.34 / 24.107

Fluorine Binding Sites:

The binding sites of Fluorine atom in the 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca (pdb code 3zse). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca, PDB code: 3zse:

Fluorine binding site 1 out of 1 in 3zse

Go back to Fluorine Binding Sites List in 3zse
Fluorine binding site 1 out of 1 in the 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of 3D Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1207

b:17.7
occ:1.00
F2A A:FXP1207 0.0 17.7 1.0
C2A A:FXP1207 1.4 16.7 1.0
C3A A:FXP1207 2.4 16.8 1.0
C1A A:FXP1207 2.5 15.8 1.0
OE1 A:GLU127 2.8 13.7 1.0
OE2 A:GLU127 2.9 15.4 1.0
O3A A:FXP1207 3.0 16.2 1.0
CD A:GLU127 3.1 14.1 1.0
CZ A:PHE173 3.3 14.4 1.0
NE2 A:GLN175 3.4 12.2 1.0
CE2 A:PHE173 3.4 13.9 1.0
CG A:ARG161 3.6 19.7 1.0
NH1 A:ARG161 3.6 23.1 1.0
O5A A:FXP1207 3.7 16.4 1.0
C4A A:FXP1207 3.8 16.6 1.0
C5A A:FXP1207 4.0 16.5 1.0
O A:HOH2043 4.0 23.4 1.0
CZ A:ARG161 4.2 24.2 1.0
CD A:ARG161 4.2 21.3 1.0
CB A:ARG161 4.3 19.0 1.0
CD A:GLN175 4.3 12.4 1.0
O A:HOH2044 4.4 28.8 1.0
CG A:GLU127 4.5 13.2 1.0
O A:PRO165 4.5 17.3 1.0
NE A:ARG161 4.5 23.8 1.0
O4A A:FXP1207 4.5 17.1 1.0
CE1 A:PHE173 4.5 14.9 1.0
CG A:GLN175 4.6 12.2 1.0
CH2 A:TRP120 4.7 12.5 1.0
CB A:GLU127 4.8 12.6 1.0
CD2 A:PHE173 4.8 14.3 1.0
O A:HOH2108 4.8 25.4 1.0
O A:HOH2082 4.8 27.3 1.0
OH A:TYR129 5.0 10.9 1.0

Reference:

A.Lammerts Van Bueren, S.Otani, E.P.Friis, K.S.Wilson, G.J.Davies. Three-Dimensional Structure of A Thermophilic Family GH11 Xylanase From Thermobifida Fusca. Acta Crystallogr.,Sect.F V. 68 141 2012.
ISSN: ISSN 1744-3091
PubMed: 22297985
DOI: 10.1107/S1744309111049608
Page generated: Sun Dec 13 11:58:19 2020

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