Fluorine in PDB 4b82: Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide
Enzymatic activity of Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide
All present enzymatic activity of Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide:
3.1.1.7;
Protein crystallography data
The structure of Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide, PDB code: 4b82
was solved by
C.D.Andersson,
N.Forsgren,
C.Akfur,
A.Allgardsson,
L.Berg,
W.Qian,
F.J.Ekstrom,
A.Linusson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
28.810 /
2.10
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
80.460,
111.858,
226.930,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.09 /
21.52
|
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide
(pdb code 4b82). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the
Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide, PDB code: 4b82:
Jump to Fluorine binding site number:
1;
2;
3;
Fluorine binding site 1 out
of 3 in 4b82
Go back to
Fluorine Binding Sites List in 4b82
Fluorine binding site 1 out
of 3 in the Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1543
b:43.9
occ:0.72
|
F09
|
A:B3Z1543
|
0.0
|
43.9
|
0.7
|
C10
|
A:B3Z1543
|
1.3
|
43.7
|
0.7
|
C6
|
A:B3Z1543
|
1.3
|
43.5
|
0.3
|
C5
|
A:B3Z1543
|
2.2
|
43.4
|
0.3
|
C9
|
A:B3Z1543
|
2.3
|
42.8
|
0.7
|
C5
|
A:B3Z1543
|
2.3
|
43.3
|
0.7
|
C7
|
A:B3Z1543
|
2.3
|
42.9
|
0.3
|
N4
|
A:B3Z1543
|
2.4
|
41.5
|
0.3
|
N4
|
A:B3Z1543
|
2.4
|
41.2
|
0.7
|
S1
|
A:B3Z1543
|
2.8
|
46.8
|
0.3
|
S1
|
A:B3Z1543
|
2.9
|
46.7
|
0.7
|
OH
|
A:TYR124
|
2.9
|
35.4
|
1.0
|
O
|
A:HOH2386
|
3.0
|
33.7
|
1.0
|
O
|
A:HOH2122
|
3.2
|
44.5
|
1.0
|
O2
|
A:B3Z1543
|
3.2
|
48.2
|
0.3
|
O2
|
A:B3Z1543
|
3.3
|
49.1
|
0.7
|
C10
|
A:B3Z1543
|
3.4
|
43.4
|
0.3
|
C6
|
A:B3Z1543
|
3.5
|
43.7
|
0.7
|
C8
|
A:B3Z1543
|
3.5
|
42.9
|
0.3
|
C8
|
A:B3Z1543
|
3.6
|
42.6
|
0.7
|
C22
|
A:B3Z1543
|
3.7
|
42.1
|
0.7
|
C22
|
A:B3Z1543
|
3.8
|
41.5
|
0.3
|
C9
|
A:B3Z1543
|
4.0
|
43.2
|
0.3
|
O
|
A:HOH2199
|
4.0
|
30.1
|
1.0
|
C7
|
A:B3Z1543
|
4.0
|
43.3
|
0.7
|
O
|
A:HOH2144
|
4.0
|
35.1
|
1.0
|
O1
|
A:B3Z1543
|
4.1
|
45.4
|
0.3
|
CZ
|
A:TYR124
|
4.2
|
32.9
|
1.0
|
O1
|
A:B3Z1543
|
4.2
|
44.3
|
0.7
|
OD2
|
A:ASP74
|
4.2
|
43.4
|
1.0
|
O
|
A:HOH2127
|
4.4
|
35.3
|
1.0
|
F09
|
A:B3Z1543
|
4.5
|
42.5
|
0.3
|
CE1
|
A:TYR337
|
4.5
|
29.4
|
1.0
|
OH
|
A:TYR341
|
4.7
|
33.0
|
1.0
|
C21
|
A:B3Z1543
|
4.7
|
38.1
|
0.7
|
C21
|
A:B3Z1543
|
4.7
|
36.9
|
0.3
|
OH
|
A:TYR337
|
4.8
|
27.6
|
1.0
|
CZ
|
A:TYR341
|
4.8
|
34.6
|
1.0
|
CE1
|
A:TYR124
|
4.9
|
33.7
|
1.0
|
CG
|
A:ASP74
|
5.0
|
41.8
|
1.0
|
|
Fluorine binding site 2 out
of 3 in 4b82
Go back to
Fluorine Binding Sites List in 4b82
Fluorine binding site 2 out
of 3 in the Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1543
b:42.5
occ:0.28
|
F09
|
A:B3Z1543
|
0.0
|
42.5
|
0.3
|
C10
|
A:B3Z1543
|
1.3
|
43.4
|
0.3
|
C6
|
A:B3Z1543
|
1.3
|
43.7
|
0.7
|
C5
|
A:B3Z1543
|
2.2
|
43.3
|
0.7
|
C9
|
A:B3Z1543
|
2.3
|
43.2
|
0.3
|
C5
|
A:B3Z1543
|
2.3
|
43.4
|
0.3
|
C7
|
A:B3Z1543
|
2.4
|
43.3
|
0.7
|
CE2
|
A:PHE338
|
2.9
|
35.5
|
1.0
|
S1
|
A:B3Z1543
|
3.0
|
46.7
|
0.7
|
O1
|
A:B3Z1543
|
3.0
|
44.3
|
0.7
|
S1
|
A:B3Z1543
|
3.1
|
46.8
|
0.3
|
O1
|
A:B3Z1543
|
3.1
|
45.4
|
0.3
|
CE1
|
A:PHE297
|
3.3
|
26.3
|
1.0
|
O2
|
A:B3Z1543
|
3.4
|
49.1
|
0.7
|
C10
|
A:B3Z1543
|
3.5
|
43.7
|
0.7
|
CZ
|
A:PHE297
|
3.5
|
26.2
|
1.0
|
O2
|
A:B3Z1543
|
3.6
|
48.2
|
0.3
|
C6
|
A:B3Z1543
|
3.6
|
43.5
|
0.3
|
C8
|
A:B3Z1543
|
3.6
|
42.9
|
0.3
|
C8
|
A:B3Z1543
|
3.6
|
42.6
|
0.7
|
CD2
|
A:PHE338
|
3.6
|
33.2
|
1.0
|
CZ
|
A:PHE338
|
3.7
|
32.5
|
1.0
|
C9
|
A:B3Z1543
|
4.0
|
42.8
|
0.7
|
C7
|
A:B3Z1543
|
4.0
|
42.9
|
0.3
|
F09
|
A:B3Z1543
|
4.5
|
43.9
|
0.7
|
N4
|
A:B3Z1543
|
4.5
|
41.2
|
0.7
|
O
|
A:HOH2359
|
4.5
|
36.4
|
1.0
|
CD1
|
A:PHE297
|
4.6
|
24.8
|
1.0
|
N4
|
A:B3Z1543
|
4.6
|
41.5
|
0.3
|
OH
|
A:TYR124
|
4.7
|
35.4
|
1.0
|
CE1
|
A:TYR124
|
4.7
|
33.7
|
1.0
|
O
|
A:HOH2192
|
4.7
|
32.0
|
1.0
|
O
|
A:HOH2173
|
4.8
|
55.2
|
1.0
|
CE2
|
A:PHE297
|
4.9
|
26.4
|
1.0
|
CG
|
A:PHE338
|
4.9
|
32.5
|
1.0
|
CE1
|
A:PHE338
|
4.9
|
32.5
|
1.0
|
|
Fluorine binding site 3 out
of 3 in 4b82
Go back to
Fluorine Binding Sites List in 4b82
Fluorine binding site 3 out
of 3 in the Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Mus Musculus Acetylcholinesterase in Complex with N-(2-Diethylamino- Ethyl)-2-Fluoranyl-Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1544
b:61.3
occ:1.00
|
F09
|
B:B3Z1544
|
0.0
|
61.3
|
1.0
|
C10
|
B:B3Z1544
|
1.3
|
57.8
|
1.0
|
C9
|
B:B3Z1544
|
2.3
|
56.9
|
1.0
|
C5
|
B:B3Z1544
|
2.3
|
56.4
|
1.0
|
N4
|
B:B3Z1544
|
2.4
|
45.2
|
1.0
|
S1
|
B:B3Z1544
|
2.9
|
46.8
|
1.0
|
O
|
B:HOH2280
|
2.9
|
40.0
|
1.0
|
OH
|
B:TYR124
|
2.9
|
39.3
|
1.0
|
O
|
B:HOH2084
|
3.2
|
44.4
|
1.0
|
O2
|
B:B3Z1544
|
3.4
|
46.6
|
1.0
|
C6
|
B:B3Z1544
|
3.5
|
57.2
|
1.0
|
C8
|
B:B3Z1544
|
3.6
|
57.8
|
1.0
|
C22
|
B:B3Z1544
|
3.7
|
48.1
|
1.0
|
O
|
B:HOH2140
|
3.8
|
30.1
|
1.0
|
C7
|
B:B3Z1544
|
4.0
|
57.6
|
1.0
|
O
|
B:HOH2108
|
4.0
|
41.8
|
1.0
|
O1
|
B:B3Z1544
|
4.2
|
43.6
|
1.0
|
CZ
|
B:TYR124
|
4.2
|
36.9
|
1.0
|
O
|
B:HOH2089
|
4.3
|
39.6
|
1.0
|
OD1
|
B:ASP74
|
4.3
|
49.8
|
1.0
|
CE1
|
B:TYR337
|
4.5
|
35.3
|
1.0
|
C21
|
B:B3Z1544
|
4.6
|
44.0
|
1.0
|
OH
|
B:TYR341
|
4.7
|
43.4
|
1.0
|
OH
|
B:TYR337
|
4.7
|
38.1
|
1.0
|
CZ
|
B:TYR341
|
4.9
|
42.0
|
1.0
|
CE1
|
B:TYR124
|
4.9
|
37.3
|
1.0
|
CG
|
B:ASP74
|
5.0
|
50.1
|
1.0
|
|
Reference:
C.D.Andersson,
N.Forsgren,
C.Akfur,
A.Allgardsson,
L.Berg,
C.Engdahl,
W.Qian,
F.J.Ekstrom,
A.Linusson.
Divergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors. J.Med.Chem. V. 56 7615 2013.
ISSN: ISSN 0022-2623
PubMed: 23984975
DOI: 10.1021/JM400990P
Page generated: Thu Aug 1 00:09:15 2024
|