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Fluorine in PDB 4fzf: Crystal Structure of MST4-MO25 Complex with Dki

Enzymatic activity of Crystal Structure of MST4-MO25 Complex with Dki

All present enzymatic activity of Crystal Structure of MST4-MO25 Complex with Dki:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of MST4-MO25 Complex with Dki, PDB code: 4fzf was solved by Z.B.Shi, Z.C.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.85 / 3.64
Space group I 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 239.464, 239.464, 239.464, 90.00, 90.00, 90.00
R / Rfree (%) 25.2 / 30.9

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of MST4-MO25 Complex with Dki (pdb code 4fzf). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of MST4-MO25 Complex with Dki, PDB code: 4fzf:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 4fzf

Go back to Fluorine Binding Sites List in 4fzf
Fluorine binding site 1 out of 2 in the Crystal Structure of MST4-MO25 Complex with Dki


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of MST4-MO25 Complex with Dki within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F301

b:78.9
occ:1.00
FAF B:DKI301 0.0 78.9 1.0
CAU B:DKI301 1.3 82.0 1.0
CAI B:DKI301 2.3 83.8 1.0
CAZ B:DKI301 2.5 81.7 1.0
NAQ B:DKI301 3.0 78.5 1.0
CA B:GLY31 3.3 90.3 1.0
CAH B:DKI301 3.6 86.4 1.0
CAV B:DKI301 3.8 82.3 1.0
NAP B:DKI301 3.9 67.9 1.0
CAS B:DKI301 4.0 73.9 1.0
O B:GLY31 4.0 0.1 1.0
CAK B:DKI301 4.1 69.6 1.0
CAM B:DKI301 4.1 72.7 1.0
C B:GLY31 4.2 0.7 1.0
CAJ B:DKI301 4.2 84.2 1.0
N B:GLY31 4.2 80.0 1.0
CG1 B:ILE30 4.2 71.0 1.0
NBA B:DKI301 4.4 69.6 1.0
CD1 B:ILE30 4.5 71.2 1.0
C B:ILE30 4.8 74.3 1.0
FAG B:DKI301 4.9 83.2 1.0
CD2 B:LEU151 5.0 51.6 1.0
O B:ILE30 5.0 71.7 1.0

Fluorine binding site 2 out of 2 in 4fzf

Go back to Fluorine Binding Sites List in 4fzf
Fluorine binding site 2 out of 2 in the Crystal Structure of MST4-MO25 Complex with Dki


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of MST4-MO25 Complex with Dki within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F301

b:83.2
occ:1.00
FAG B:DKI301 0.0 83.2 1.0
CAV B:DKI301 1.3 82.3 1.0
CAJ B:DKI301 2.3 84.2 1.0
CAZ B:DKI301 2.5 81.7 1.0
SAE B:DKI301 2.7 77.1 1.0
NAQ B:DKI301 2.9 78.5 1.0
CD2 B:PHE163 3.1 65.6 1.0
CAS B:DKI301 3.2 73.9 1.0
CAH B:DKI301 3.6 86.4 1.0
CB B:PHE163 3.7 62.7 1.0
CB B:ALA161 3.7 53.0 1.0
CG B:PHE163 3.8 65.2 1.0
CAU B:DKI301 3.8 82.0 1.0
CE2 B:PHE163 4.0 67.4 1.0
CAI B:DKI301 4.2 83.8 1.0
NBA B:DKI301 4.6 69.6 1.0
N B:PHE163 4.7 60.3 1.0
CA B:ALA161 4.7 53.4 1.0
CA B:PHE163 4.8 62.7 1.0
FAF B:DKI301 4.9 78.9 1.0
C B:ALA161 5.0 55.0 1.0

Reference:

Z.Shi, S.Jiao, Z.Zhang, M.Ma, Z.Zhang, C.Chen, K.Wang, H.Wang, W.Wang, L.Zhang, Y.Zhao, Z.Zhou. Structure of the MST4 in Complex with MO25 Provides Insights Into Its Activation Mechanism Structure V. 21 449 2013.
ISSN: ISSN 0969-2126
PubMed: 23434407
DOI: 10.1016/J.STR.2013.01.007
Page generated: Thu Aug 1 01:44:40 2024

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