Atomistry » Fluorine » PDB 4fxq-4goa » 4g90
Atomistry »
  Fluorine »
    PDB 4fxq-4goa »
      4g90 »

Fluorine in PDB 4g90: Crystal Structure of Ribonuclease A in Complex with 5E

Enzymatic activity of Crystal Structure of Ribonuclease A in Complex with 5E

All present enzymatic activity of Crystal Structure of Ribonuclease A in Complex with 5E:
3.1.27.5;

Protein crystallography data

The structure of Crystal Structure of Ribonuclease A in Complex with 5E, PDB code: 4g90 was solved by D.S.M.Chatzileontiadou, A.L.Kantsadi, D.D.Leonidas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 13.86 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 100.399, 32.631, 72.461, 90.00, 90.95, 90.00
R / Rfree (%) 17.5 / 23.6

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Ribonuclease A in Complex with 5E (pdb code 4g90). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Ribonuclease A in Complex with 5E, PDB code: 4g90:

Fluorine binding site 1 out of 1 in 4g90

Go back to Fluorine Binding Sites List in 4g90
Fluorine binding site 1 out of 1 in the Crystal Structure of Ribonuclease A in Complex with 5E


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Ribonuclease A in Complex with 5E within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F201

b:34.2
occ:1.00
F5A A:0G0201 0.0 34.2 1.0
C5 A:0G0201 1.3 32.2 1.0
C4 A:0G0201 2.3 26.1 1.0
C6 A:0G0201 2.3 38.3 1.0
O4 A:0G0201 2.7 24.9 1.0
NZ A:LYS66 3.1 19.6 1.0
O A:ASP121 3.3 9.2 1.0
O A:HOH345 3.3 17.7 1.0
N3 A:0G0201 3.6 28.6 1.0
N1 A:0G0201 3.6 38.2 1.0
C A:ASP121 4.1 10.1 1.0
C2 A:0G0201 4.1 23.9 1.0
CA A:ALA122 4.1 9.0 1.0
N A:ALA122 4.4 5.5 1.0
O A:HOH354 4.4 26.2 1.0
CE A:LYS66 4.5 19.5 1.0
C7 A:0G0201 4.7 44.9 1.0
CB A:ALA122 4.7 6.1 1.0

Reference:

V.Parmenopoulou, D.S.Chatzileontiadou, S.Manta, S.Bougiatioti, P.Maragozidis, D.N.Gkaragkouni, E.Kaffesaki, A.L.Kantsadi, V.T.Skamnaki, S.E.Zographos, P.Zounpoulakis, N.A.Balatsos, D.Komiotis, D.D.Leonidas. Triazole Pyrimidine Nucleosides As Inhibitors of Ribonuclease A. Synthesis, Biochemical, and Structural Evaluation. Bioorg.Med.Chem. V. 20 7184 2012.
ISSN: ISSN 0968-0896
PubMed: 23122937
DOI: 10.1016/J.BMC.2012.09.067
Page generated: Thu Aug 1 01:48:00 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy