Atomistry » Fluorine » PDB 4mm9-4ncg » 4moh
Atomistry »
  Fluorine »
    PDB 4mm9-4ncg »
      4moh »

Fluorine in PDB 4moh: Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose

Enzymatic activity of Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose

All present enzymatic activity of Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose:
1.1.3.10;

Protein crystallography data

The structure of Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose, PDB code: 4moh was solved by T.C.Tan, O.Spadiut, R.Gandini, D.Haltrich, C.Divne, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.10
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 102.490, 102.490, 118.101, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 22.1

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose (pdb code 4moh). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose, PDB code: 4moh:

Fluorine binding site 1 out of 1 in 4moh

Go back to Fluorine Binding Sites List in 4moh
Fluorine binding site 1 out of 1 in the Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pyranose 2-Oxidase V546C Mutant with 2-Fluorinated Glucose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F802

b:40.5
occ:1.00
F2 A:SHG802 0.0 40.5 1.0
C2 A:SHG802 1.4 35.6 1.0
C1 A:SHG802 2.4 37.4 1.0
C3 A:SHG802 2.5 34.9 1.0
O4 A:FDA801 2.8 22.3 1.0
O3 A:SHG802 2.9 33.5 1.0
O1 A:SHG802 3.0 40.8 1.0
NE2 A:GLN448 3.0 22.1 1.0
CB A:THR169 3.1 21.2 1.0
CG2 A:THR169 3.1 20.1 1.0
ND2 A:ASN593 3.4 21.3 1.0
OE1 A:GLN448 3.6 23.4 1.0
OG1 A:THR169 3.6 22.8 1.0
C4 A:FDA801 3.7 20.9 1.0
O5 A:SHG802 3.7 39.5 1.0
CD A:GLN448 3.7 21.3 1.0
N5 A:FDA801 3.8 20.2 1.0
C4 A:SHG802 3.9 34.5 1.0
C4X A:FDA801 4.1 20.6 1.0
CB A:ALA171 4.1 15.7 1.0
C5 A:SHG802 4.3 38.5 1.0
CA A:THR169 4.5 21.0 1.0
N3 A:FDA801 4.6 20.6 1.0
CG A:ASN593 4.7 22.1 1.0
CZ A:PHE474 4.8 20.2 1.0
C A:THR169 4.9 20.4 1.0
O4 A:SHG802 4.9 37.8 1.0
C5X A:FDA801 4.9 21.1 1.0
N A:ALA171 4.9 17.3 1.0
CE1 A:HIS450 4.9 21.7 1.0
N A:THR169 5.0 20.8 1.0

Reference:

T.C.Tan, O.Spadiut, R.Gandini, D.Haltrich, C.Divne. Structural Basis For Binding of Fluorinated Glucose and Galactose to Trametes Multicolor Pyranose 2-Oxidase Variants with Improved Galactose Conversion. Plos One V. 9 86736 2014.
ISSN: ESSN 1932-6203
PubMed: 24466218
DOI: 10.1371/JOURNAL.PONE.0086736
Page generated: Thu Aug 1 03:59:27 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy