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Fluorine in PDB 4mxc: Crystal Structure of Cmet in Complex with Novel Inhibitor

Enzymatic activity of Crystal Structure of Cmet in Complex with Novel Inhibitor

All present enzymatic activity of Crystal Structure of Cmet in Complex with Novel Inhibitor:
2.7.10.1;

Protein crystallography data

The structure of Crystal Structure of Cmet in Complex with Novel Inhibitor, PDB code: 4mxc was solved by Q.F.Liu, T.T.Chen, Y.C.Xu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.97 / 1.63
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.963, 80.935, 90.867, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 20.7

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Cmet in Complex with Novel Inhibitor (pdb code 4mxc). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Cmet in Complex with Novel Inhibitor, PDB code: 4mxc:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 4mxc

Go back to Fluorine Binding Sites List in 4mxc
Fluorine binding site 1 out of 2 in the Crystal Structure of Cmet in Complex with Novel Inhibitor


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Cmet in Complex with Novel Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1401

b:16.0
occ:1.00
FAG A:DWF1401 0.0 16.0 1.0
CBK A:DWF1401 1.3 15.4 1.0
CBN A:DWF1401 2.3 13.0 1.0
CAT A:DWF1401 2.4 10.9 1.0
OBC A:DWF1401 2.7 12.7 1.0
CG2 A:VAL1092 3.2 15.0 1.0
CG1 A:VAL1092 3.3 13.9 1.0
C4 A:DWF1401 3.6 12.4 1.0
CAR A:DWF1401 3.6 9.5 1.0
CBI A:DWF1401 3.6 9.5 1.0
CB A:VAL1092 3.9 13.7 1.0
C5 A:DWF1401 4.0 10.3 1.0
CB A:LYS1110 4.1 14.3 1.0
CAQ A:DWF1401 4.1 9.8 1.0
CD2 A:LEU1157 4.1 20.0 1.0
CD A:LYS1110 4.4 15.4 1.0
CG A:LYS1110 4.5 16.6 1.0
CB A:ALA1108 4.6 8.8 1.0
N3 A:DWF1401 4.7 11.7 1.0
CE2 A:PHE1223 4.8 21.4 1.0
CG A:LEU1157 4.8 17.4 1.0
NBA A:DWF1401 4.8 10.8 1.0
CA A:LYS1110 4.8 12.9 1.0
OAC A:DWF1401 4.9 14.6 1.0
CD2 A:PHE1223 4.9 25.5 1.0

Fluorine binding site 2 out of 2 in 4mxc

Go back to Fluorine Binding Sites List in 4mxc
Fluorine binding site 2 out of 2 in the Crystal Structure of Cmet in Complex with Novel Inhibitor


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Cmet in Complex with Novel Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1401

b:24.8
occ:1.00
FAF A:DWF1401 0.0 24.8 1.0
CBF A:DWF1401 1.3 19.6 1.0
CAM A:DWF1401 2.3 13.8 1.0
CAN A:DWF1401 2.4 17.9 1.0
CD1 A:LEU1195 3.1 15.2 1.0
CAP A:DWF1401 3.6 17.9 1.0
CAO A:DWF1401 3.6 13.6 1.0
CG1 A:VAL1139 3.8 10.9 1.0
CG1 A:VAL1220 3.8 11.4 1.0
O A:VAL1220 3.8 10.7 1.0
CD2 A:LEU1195 3.8 14.1 1.0
CE2 A:PHE1134 4.0 23.2 1.0
CBH A:DWF1401 4.1 10.0 1.0
CG A:LEU1195 4.1 10.8 1.0
CD2 A:HIS1202 4.2 14.1 1.0
C A:VAL1220 4.2 10.4 1.0
CE2 A:PHE1200 4.2 20.7 1.0
CD2 A:PHE1134 4.3 21.2 1.0
CB A:VAL1220 4.4 10.3 1.0
N A:ALA1221 4.5 8.5 1.0
CA A:ALA1221 4.5 8.9 1.0
NE2 A:HIS1202 4.7 14.9 1.0
CZ A:PHE1134 4.7 18.5 1.0
CD2 A:PHE1200 4.8 16.0 1.0
CZ A:PHE1200 4.9 18.9 1.0
CB A:VAL1139 4.9 9.7 1.0
C A:ALA1221 4.9 11.1 1.0
CG2 A:VAL1139 5.0 9.3 1.0
CA A:VAL1220 5.0 9.6 1.0

Reference:

Q.F.Liu, T.T.Chen, W.H.Du, Y.C.Xu. Novel Inhibitors For Tyrosine Kinase C-Met To Be Published.
Page generated: Thu Aug 1 04:02:58 2024

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