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Fluorine in PDB 4o0o: Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution

Enzymatic activity of Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution

All present enzymatic activity of Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution:
3.2.2.22;

Protein crystallography data

The structure of Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution, PDB code: 4o0o was solved by S.Yamini, S.Pandey, G.S.Kushwaha, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.66 / 2.59
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 130.447, 130.447, 39.044, 90.00, 90.00, 120.00
R / Rfree (%) 19.2 / 21.8

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution (pdb code 4o0o). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution, PDB code: 4o0o:

Fluorine binding site 1 out of 1 in 4o0o

Go back to Fluorine Binding Sites List in 4o0o
Fluorine binding site 1 out of 1 in the Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F303

b:86.1
occ:1.00
 F5 A:URF303 0.0 86.1 1.0
C5 A:URF303 1.3 88.3 1.0
C6 A:URF303 2.4 84.7 1.0
C4 A:URF303 2.5 87.3 1.0
O4 A:URF303 2.8 84.8 1.0
CD2 A:TYR70 3.3 67.3 1.0
NH2 A:ARG163 3.5 51.3 1.0
CG2 A:ILE155 3.6 41.3 1.0
N1 A:URF303 3.6 82.7 1.0
N3 A:URF303 3.6 84.2 1.0
NH1 A:ARG163 3.8 52.8 1.0
CA A:TYR70 3.9 55.3 1.0
O A:VAL69 3.9 55.7 1.0
CE2 A:TYR70 3.9 69.1 1.0
C2 A:URF303 4.1 82.4 1.0
CZ A:ARG163 4.1 53.8 1.0
CG A:TYR70 4.2 65.1 1.0
CB A:ALA159 4.2 47.1 1.0
CD1 A:ILE71 4.4 60.6 1.0
CB A:TYR70 4.4 58.5 1.0
N A:ILE71 4.5 52.2 1.0
C A:VAL69 4.5 54.7 1.0
N A:TYR70 4.5 54.3 1.0
C A:TYR70 4.7 53.0 1.0
CG1 A:ILE155 4.8 44.1 1.0
CB A:ILE155 4.8 43.5 1.0
CD1 A:ILE155 4.8 45.8 1.0

Reference:

S.Yamini, S.Pandey, G.S.Kushwaha, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of the Complex of Type 1 Ribosome Inactivating Protein From Momordica Balsamina with 5-Fluorouracil at 2.59 A Resolution To Be Published.
Page generated: Thu Aug 1 04:26:19 2024

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