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Fluorine in PDB 4py4: Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2

Enzymatic activity of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2

All present enzymatic activity of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2, PDB code: 4py4 was solved by J.Li, Y.Xu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.12 / 2.76
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.580, 66.910, 144.680, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 25.7

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2 (pdb code 4py4). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2, PDB code: 4py4:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 4py4

Go back to Fluorine Binding Sites List in 4py4
Fluorine binding site 1 out of 2 in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1901

b:30.9
occ:1.00
F13 A:XL21901 0.0 30.9 1.0
C02 A:XL21901 1.3 28.7 1.0
C03 A:XL21901 2.4 28.7 1.0
C01 A:XL21901 2.4 21.7 1.0
CD2 A:TYR1721 3.2 22.8 1.0
CE2 A:TYR1721 3.2 24.4 1.0
CG A:TYR1721 3.3 23.2 1.0
CZ A:TYR1721 3.3 32.3 1.0
CD1 A:TYR1721 3.3 27.0 1.0
CE1 A:TYR1721 3.3 28.7 1.0
CB A:ALA1716 3.4 14.3 1.0
C04 A:XL21901 3.7 25.1 1.0
C06 A:XL21901 3.7 24.3 1.0
CA A:ALA1716 3.8 15.5 1.0
CB A:LEU1782 4.0 23.8 1.0
CD2 A:LEU1782 4.1 27.6 1.0
OH A:TYR1721 4.1 35.0 1.0
CB A:TYR1721 4.1 19.1 1.0
N A:ALA1716 4.2 14.9 1.0
C05 A:XL21901 4.2 28.2 1.0
O A:PHE1715 4.4 16.0 1.0
C A:PHE1715 4.4 14.5 1.0
O A:SER1781 4.6 20.7 1.0
CG A:LEU1782 4.7 21.7 1.0
C10 A:XL21901 5.0 21.6 1.0

Fluorine binding site 2 out of 2 in 4py4

Go back to Fluorine Binding Sites List in 4py4
Fluorine binding site 2 out of 2 in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F1901

b:36.8
occ:1.00
F13 B:XL21901 0.0 36.8 1.0
C02 B:XL21901 1.3 30.1 1.0
C01 B:XL21901 2.4 25.8 1.0
C03 B:XL21901 2.4 29.0 1.0
CD2 B:TYR1721 3.5 36.1 1.0
C06 B:XL21901 3.7 23.5 1.0
C04 B:XL21901 3.7 28.7 1.0
CB B:TYR1721 3.8 21.3 1.0
CB B:ALA1716 3.8 14.1 1.0
CD2 B:LEU1782 4.0 24.3 1.0
CG B:TYR1721 4.1 35.1 1.0
CB B:LEU1782 4.1 18.8 1.0
C05 B:XL21901 4.2 26.2 1.0
CA B:ALA1716 4.5 13.8 1.0
CE2 B:TYR1721 4.5 35.7 1.0
CE2 B:TYR1727 4.7 22.2 1.0
CG B:LEU1782 4.8 18.6 1.0
N B:ALA1716 4.8 16.7 1.0
C10 B:XL21901 4.9 21.4 1.0
C B:PHE1715 4.9 16.3 1.0
CA B:TYR1721 5.0 19.1 1.0
O B:PHE1715 5.0 16.9 1.0
C B:TYR1721 5.0 18.4 1.0

Reference:

J.Li, Y.Xu. Crystal Structure of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Domain in Complex with An Inhibitor XL2 To Be Published.
Page generated: Sun Dec 13 12:11:03 2020

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