Fluorine in PDB 4q0l: Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Enzymatic activity of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
All present enzymatic activity of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor:
4.2.1.1;
Protein crystallography data
The structure of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor, PDB code: 4q0l
was solved by
A.Smirnov,
E.Manakova,
S.Grazulis,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
22.09 /
2.00
|
Space group
|
P 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
46.520,
75.211,
77.888,
109.42,
101.60,
107.95
|
R / Rfree (%)
|
26.4 /
32.8
|
Other elements in 4q0l:
The structure of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
15;
Binding sites:
The binding sites of Fluorine atom in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
(pdb code 4q0l). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 15 binding sites of Fluorine where determined in the
Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor, PDB code: 4q0l:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 1 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:28.9
occ:1.00
|
F20
|
A:V14302
|
0.0
|
28.9
|
1.0
|
C5
|
A:V14302
|
1.4
|
26.8
|
1.0
|
C4
|
A:V14302
|
2.3
|
25.0
|
1.0
|
C6
|
A:V14302
|
2.5
|
28.6
|
1.0
|
O9
|
A:V14302
|
2.7
|
24.1
|
1.0
|
S7
|
A:V14302
|
2.8
|
23.5
|
1.0
|
N19
|
A:V14302
|
2.9
|
29.4
|
1.0
|
C14
|
A:V14302
|
3.0
|
27.6
|
1.0
|
O8
|
A:V14302
|
3.0
|
24.2
|
1.0
|
CD2
|
A:LEU197
|
3.1
|
12.8
|
1.0
|
CG2
|
A:VAL119
|
3.5
|
13.9
|
1.0
|
C3
|
A:V14302
|
3.6
|
25.5
|
1.0
|
C22
|
A:V14302
|
3.6
|
28.0
|
1.0
|
C1
|
A:V14302
|
3.7
|
28.6
|
1.0
|
C2
|
A:V14302
|
4.1
|
26.8
|
1.0
|
C28
|
A:V14302
|
4.1
|
26.1
|
1.0
|
CG1
|
A:VAL119
|
4.2
|
13.4
|
1.0
|
CE1
|
A:HIS91
|
4.3
|
17.4
|
1.0
|
CB
|
A:VAL119
|
4.5
|
13.8
|
1.0
|
CG
|
A:LEU197
|
4.5
|
13.2
|
1.0
|
N10
|
A:V14302
|
4.5
|
22.1
|
1.0
|
F12
|
A:V14302
|
4.7
|
21.6
|
1.0
|
CG2
|
A:VAL141
|
4.7
|
12.2
|
1.0
|
CB
|
A:LEU197
|
4.9
|
12.2
|
1.0
|
|
Fluorine binding site 2 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 2 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:21.6
occ:1.00
|
F12
|
A:V14302
|
0.0
|
21.6
|
1.0
|
C3
|
A:V14302
|
1.4
|
25.5
|
1.0
|
C4
|
A:V14302
|
2.4
|
25.0
|
1.0
|
C2
|
A:V14302
|
2.4
|
26.8
|
1.0
|
F13
|
A:V14302
|
2.6
|
27.1
|
1.0
|
N10
|
A:V14302
|
2.9
|
22.1
|
1.0
|
S7
|
A:V14302
|
2.9
|
23.5
|
1.0
|
ZN
|
A:ZN301
|
3.0
|
13.0
|
1.0
|
NE2
|
A:HIS91
|
3.1
|
17.6
|
1.0
|
OG1
|
A:THR199
|
3.2
|
12.9
|
1.0
|
CE1
|
A:HIS93
|
3.2
|
12.2
|
1.0
|
CG2
|
A:THR199
|
3.3
|
13.0
|
1.0
|
NE2
|
A:HIS93
|
3.3
|
12.2
|
1.0
|
CE1
|
A:HIS91
|
3.5
|
17.4
|
1.0
|
OG1
|
A:THR198
|
3.6
|
11.5
|
1.0
|
C5
|
A:V14302
|
3.7
|
26.8
|
1.0
|
C1
|
A:V14302
|
3.7
|
28.6
|
1.0
|
CB
|
A:THR199
|
3.9
|
12.6
|
1.0
|
CD2
|
A:HIS91
|
4.0
|
16.3
|
1.0
|
O8
|
A:V14302
|
4.0
|
24.2
|
1.0
|
O9
|
A:V14302
|
4.1
|
24.1
|
1.0
|
C6
|
A:V14302
|
4.2
|
28.6
|
1.0
|
ND1
|
A:HIS91
|
4.5
|
15.8
|
1.0
|
ND1
|
A:HIS93
|
4.6
|
12.0
|
1.0
|
N
|
A:THR199
|
4.6
|
10.5
|
1.0
|
CD2
|
A:HIS93
|
4.7
|
12.0
|
1.0
|
F20
|
A:V14302
|
4.7
|
28.9
|
1.0
|
CG
|
A:HIS91
|
4.7
|
16.4
|
1.0
|
CA
|
A:THR199
|
4.9
|
12.0
|
1.0
|
C
|
A:THR198
|
4.9
|
10.4
|
1.0
|
ND1
|
A:HIS117
|
4.9
|
10.2
|
1.0
|
CB
|
A:THR198
|
5.0
|
10.7
|
1.0
|
|
Fluorine binding site 3 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 3 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:27.1
occ:1.00
|
F13
|
A:V14302
|
0.0
|
27.1
|
1.0
|
C2
|
A:V14302
|
1.4
|
26.8
|
1.0
|
C3
|
A:V14302
|
2.3
|
25.5
|
1.0
|
C1
|
A:V14302
|
2.5
|
28.6
|
1.0
|
F12
|
A:V14302
|
2.6
|
21.6
|
1.0
|
O16
|
A:V14302
|
2.7
|
33.0
|
1.0
|
S11
|
A:V14302
|
3.1
|
30.1
|
1.0
|
O17
|
A:V14302
|
3.2
|
32.4
|
1.0
|
OG1
|
A:THR199
|
3.3
|
12.9
|
1.0
|
C4
|
A:V14302
|
3.5
|
25.0
|
1.0
|
CG2
|
A:THR199
|
3.6
|
13.0
|
1.0
|
C6
|
A:V14302
|
3.7
|
28.6
|
1.0
|
CB
|
A:THR199
|
3.9
|
12.6
|
1.0
|
C5
|
A:V14302
|
4.1
|
26.8
|
1.0
|
CE1
|
A:HIS91
|
4.5
|
17.4
|
1.0
|
NE2
|
A:HIS91
|
4.5
|
17.6
|
1.0
|
ND1
|
A:HIS91
|
4.7
|
15.8
|
1.0
|
CD2
|
A:HIS91
|
4.8
|
16.3
|
1.0
|
CB
|
A:SER67
|
4.8
|
19.2
|
1.0
|
CE1
|
A:HIS93
|
4.9
|
12.2
|
1.0
|
CG
|
A:HIS91
|
4.9
|
16.4
|
1.0
|
C15
|
A:V14302
|
4.9
|
29.7
|
1.0
|
N19
|
A:V14302
|
5.0
|
29.4
|
1.0
|
S7
|
A:V14302
|
5.0
|
23.5
|
1.0
|
|
Fluorine binding site 4 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 4 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F302
b:19.9
occ:1.00
|
F20
|
B:V14302
|
0.0
|
19.9
|
1.0
|
C5
|
B:V14302
|
1.4
|
19.0
|
1.0
|
C4
|
B:V14302
|
2.4
|
16.8
|
1.0
|
C6
|
B:V14302
|
2.4
|
19.6
|
1.0
|
C14
|
B:V14302
|
2.8
|
21.6
|
1.0
|
N19
|
B:V14302
|
2.9
|
21.7
|
1.0
|
S7
|
B:V14302
|
2.9
|
15.4
|
1.0
|
O8
|
B:V14302
|
2.9
|
13.3
|
1.0
|
O9
|
B:V14302
|
3.1
|
13.2
|
1.0
|
CD2
|
B:LEU197
|
3.3
|
10.6
|
1.0
|
CG2
|
B:VAL119
|
3.4
|
11.1
|
1.0
|
C28
|
B:V14302
|
3.5
|
21.7
|
1.0
|
C3
|
B:V14302
|
3.6
|
17.4
|
1.0
|
C1
|
B:V14302
|
3.7
|
19.3
|
1.0
|
CG1
|
B:VAL119
|
3.9
|
12.1
|
1.0
|
C22
|
B:V14302
|
3.9
|
22.3
|
1.0
|
CE1
|
B:HIS91
|
3.9
|
10.0
|
1.0
|
C2
|
B:V14302
|
4.1
|
17.7
|
1.0
|
CB
|
B:VAL119
|
4.3
|
11.5
|
1.0
|
N10
|
B:V14302
|
4.6
|
13.2
|
1.0
|
NE2
|
B:HIS91
|
4.7
|
9.4
|
1.0
|
CG
|
B:LEU197
|
4.7
|
10.3
|
1.0
|
F12
|
B:V14302
|
4.8
|
18.4
|
1.0
|
NE2
|
B:GLN89
|
4.8
|
12.0
|
1.0
|
C23
|
B:V14302
|
4.8
|
23.5
|
1.0
|
C27
|
B:V14302
|
4.9
|
22.5
|
1.0
|
ND1
|
B:HIS91
|
4.9
|
9.4
|
1.0
|
|
Fluorine binding site 5 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 5 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F302
b:18.4
occ:1.00
|
F12
|
B:V14302
|
0.0
|
18.4
|
1.0
|
C3
|
B:V14302
|
1.3
|
17.4
|
1.0
|
C2
|
B:V14302
|
2.3
|
17.7
|
1.0
|
C4
|
B:V14302
|
2.4
|
16.8
|
1.0
|
F13
|
B:V14302
|
2.6
|
17.7
|
1.0
|
N10
|
B:V14302
|
2.7
|
13.2
|
1.0
|
ZN
|
B:ZN301
|
3.0
|
14.0
|
1.0
|
CG2
|
B:THR199
|
3.0
|
10.3
|
1.0
|
NE2
|
B:HIS91
|
3.1
|
9.4
|
1.0
|
S7
|
B:V14302
|
3.1
|
15.4
|
1.0
|
NE2
|
B:HIS93
|
3.3
|
10.2
|
1.0
|
CE1
|
B:HIS93
|
3.4
|
9.9
|
1.0
|
C1
|
B:V14302
|
3.6
|
19.3
|
1.0
|
CD2
|
B:HIS91
|
3.7
|
9.7
|
1.0
|
OG1
|
B:THR199
|
3.7
|
9.6
|
1.0
|
C5
|
B:V14302
|
3.7
|
19.0
|
1.0
|
CE1
|
B:HIS91
|
3.8
|
10.0
|
1.0
|
OG1
|
B:THR198
|
3.9
|
10.2
|
1.0
|
CB
|
B:THR199
|
4.0
|
10.2
|
1.0
|
C6
|
B:V14302
|
4.2
|
19.6
|
1.0
|
O9
|
B:V14302
|
4.2
|
13.2
|
1.0
|
O8
|
B:V14302
|
4.3
|
13.3
|
1.0
|
N
|
B:THR199
|
4.5
|
9.8
|
1.0
|
CD2
|
B:HIS93
|
4.6
|
10.2
|
1.0
|
CG
|
B:HIS91
|
4.6
|
9.9
|
1.0
|
ND1
|
B:HIS91
|
4.6
|
9.4
|
1.0
|
ND1
|
B:HIS93
|
4.7
|
10.5
|
1.0
|
OE1
|
B:GLU104
|
4.7
|
12.7
|
1.0
|
OH
|
B:TYR6
|
4.8
|
12.8
|
1.0
|
F20
|
B:V14302
|
4.8
|
19.9
|
1.0
|
S11
|
B:V14302
|
4.8
|
20.7
|
1.0
|
CA
|
B:THR199
|
4.9
|
10.2
|
1.0
|
ND1
|
B:HIS117
|
5.0
|
9.8
|
1.0
|
|
Fluorine binding site 6 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 6 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F302
b:17.7
occ:1.00
|
F13
|
B:V14302
|
0.0
|
17.7
|
1.0
|
C2
|
B:V14302
|
1.3
|
17.7
|
1.0
|
C1
|
B:V14302
|
2.3
|
19.3
|
1.0
|
C3
|
B:V14302
|
2.4
|
17.4
|
1.0
|
F12
|
B:V14302
|
2.6
|
18.4
|
1.0
|
S11
|
B:V14302
|
2.7
|
20.7
|
1.0
|
O17
|
B:V14302
|
2.8
|
18.7
|
1.0
|
C15
|
B:V14302
|
3.0
|
21.3
|
1.0
|
C18
|
B:V14302
|
3.5
|
26.1
|
1.0
|
CG2
|
B:THR199
|
3.6
|
10.3
|
1.0
|
C4
|
B:V14302
|
3.6
|
16.8
|
1.0
|
C6
|
B:V14302
|
3.6
|
19.6
|
1.0
|
OG1
|
B:THR199
|
3.8
|
9.6
|
1.0
|
C5
|
B:V14302
|
4.1
|
19.0
|
1.0
|
CB
|
B:THR199
|
4.1
|
10.2
|
1.0
|
O16
|
B:V14302
|
4.1
|
21.3
|
1.0
|
NE2
|
B:HIS91
|
4.4
|
9.4
|
1.0
|
CD2
|
B:HIS91
|
4.5
|
9.7
|
1.0
|
CE1
|
B:HIS91
|
4.6
|
10.0
|
1.0
|
CG
|
B:HIS91
|
4.8
|
9.9
|
1.0
|
ND1
|
B:HIS91
|
4.8
|
9.4
|
1.0
|
O21
|
B:V14302
|
4.8
|
30.0
|
1.0
|
N19
|
B:V14302
|
4.8
|
21.7
|
1.0
|
CB
|
B:SER67
|
4.9
|
16.7
|
1.0
|
CH2
|
B:TRP4
|
4.9
|
20.8
|
1.0
|
CB
|
B:HIS66
|
5.0
|
18.9
|
1.0
|
ND2
|
B:ASN64
|
5.0
|
15.8
|
1.0
|
|
Fluorine binding site 7 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 7 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F302
b:25.8
occ:1.00
|
F20
|
C:V14302
|
0.0
|
25.8
|
1.0
|
C5
|
C:V14302
|
1.4
|
25.7
|
1.0
|
C6
|
C:V14302
|
2.4
|
27.0
|
1.0
|
C4
|
C:V14302
|
2.4
|
23.0
|
1.0
|
C14
|
C:V14302
|
2.6
|
28.3
|
1.0
|
N19
|
C:V14302
|
2.7
|
29.7
|
1.0
|
O9
|
C:V14302
|
3.0
|
20.3
|
1.0
|
S7
|
C:V14302
|
3.0
|
21.8
|
1.0
|
CD2
|
C:LEU197
|
3.0
|
11.6
|
1.0
|
C22
|
C:V14302
|
3.4
|
29.8
|
1.0
|
O8
|
C:V14302
|
3.4
|
20.7
|
1.0
|
C3
|
C:V14302
|
3.6
|
24.3
|
1.0
|
C1
|
C:V14302
|
3.7
|
27.4
|
1.0
|
C28
|
C:V14302
|
3.7
|
28.0
|
1.0
|
CG2
|
C:VAL119
|
3.8
|
15.3
|
1.0
|
C2
|
C:V14302
|
4.1
|
24.5
|
1.0
|
CE1
|
C:HIS91
|
4.2
|
14.2
|
1.0
|
CG1
|
C:VAL119
|
4.2
|
14.4
|
1.0
|
CG
|
C:LEU197
|
4.5
|
11.8
|
1.0
|
CB
|
C:VAL119
|
4.6
|
14.8
|
1.0
|
N10
|
C:V14302
|
4.7
|
21.0
|
1.0
|
CG2
|
C:VAL141
|
4.8
|
11.9
|
1.0
|
F12
|
C:V14302
|
4.8
|
22.4
|
1.0
|
C23
|
C:V14302
|
4.9
|
28.2
|
1.0
|
CB
|
C:LEU197
|
4.9
|
10.9
|
1.0
|
NE2
|
C:HIS91
|
4.9
|
15.3
|
1.0
|
|
Fluorine binding site 8 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 8 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F302
b:22.4
occ:1.00
|
F12
|
C:V14302
|
0.0
|
22.4
|
1.0
|
C3
|
C:V14302
|
1.4
|
24.3
|
1.0
|
C2
|
C:V14302
|
2.3
|
24.5
|
1.0
|
C4
|
C:V14302
|
2.4
|
23.0
|
1.0
|
F13
|
C:V14302
|
2.6
|
24.0
|
1.0
|
N10
|
C:V14302
|
2.9
|
21.0
|
1.0
|
NE2
|
C:HIS91
|
2.9
|
15.3
|
1.0
|
S7
|
C:V14302
|
3.0
|
21.8
|
1.0
|
ZN
|
C:ZN301
|
3.0
|
14.2
|
1.0
|
CE1
|
C:HIS93
|
3.2
|
10.7
|
1.0
|
CG2
|
C:THR199
|
3.3
|
13.5
|
1.0
|
OG1
|
C:THR199
|
3.4
|
12.7
|
1.0
|
NE2
|
C:HIS93
|
3.5
|
10.5
|
1.0
|
OG1
|
C:THR198
|
3.5
|
11.6
|
1.0
|
C1
|
C:V14302
|
3.7
|
27.4
|
1.0
|
C5
|
C:V14302
|
3.7
|
25.7
|
1.0
|
CE1
|
C:HIS91
|
3.7
|
14.2
|
1.0
|
CD2
|
C:HIS91
|
3.7
|
14.3
|
1.0
|
CB
|
C:THR199
|
4.0
|
12.5
|
1.0
|
O8
|
C:V14302
|
4.1
|
20.7
|
1.0
|
C6
|
C:V14302
|
4.2
|
27.0
|
1.0
|
O9
|
C:V14302
|
4.2
|
20.3
|
1.0
|
ND1
|
C:HIS93
|
4.5
|
11.3
|
1.0
|
O
|
C:HOH451
|
4.5
|
16.5
|
1.0
|
N
|
C:THR199
|
4.5
|
10.8
|
1.0
|
ND1
|
C:HIS91
|
4.7
|
13.5
|
1.0
|
CG
|
C:HIS91
|
4.7
|
13.8
|
1.0
|
F20
|
C:V14302
|
4.8
|
25.8
|
1.0
|
ND1
|
C:HIS117
|
4.8
|
9.8
|
1.0
|
CD2
|
C:HIS93
|
4.8
|
10.9
|
1.0
|
CB
|
C:THR198
|
4.9
|
10.5
|
1.0
|
CA
|
C:THR199
|
4.9
|
12.2
|
1.0
|
C
|
C:THR198
|
4.9
|
10.7
|
1.0
|
OH
|
C:TYR6
|
5.0
|
15.0
|
1.0
|
OE1
|
C:GLU104
|
5.0
|
14.9
|
1.0
|
O16
|
C:V14302
|
5.0
|
30.1
|
1.0
|
|
Fluorine binding site 9 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 9 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F302
b:24.0
occ:1.00
|
F13
|
C:V14302
|
0.0
|
24.0
|
1.0
|
C2
|
C:V14302
|
1.3
|
24.5
|
1.0
|
C3
|
C:V14302
|
2.3
|
24.3
|
1.0
|
C1
|
C:V14302
|
2.4
|
27.4
|
1.0
|
F12
|
C:V14302
|
2.6
|
22.4
|
1.0
|
O16
|
C:V14302
|
2.8
|
30.1
|
1.0
|
O17
|
C:V14302
|
2.9
|
31.8
|
1.0
|
S11
|
C:V14302
|
3.0
|
28.9
|
1.0
|
OG1
|
C:THR199
|
3.4
|
12.7
|
1.0
|
CG2
|
C:THR199
|
3.5
|
13.5
|
1.0
|
C4
|
C:V14302
|
3.6
|
23.0
|
1.0
|
C6
|
C:V14302
|
3.7
|
27.0
|
1.0
|
NE2
|
C:HIS91
|
4.0
|
15.3
|
1.0
|
CB
|
C:THR199
|
4.0
|
12.5
|
1.0
|
C5
|
C:V14302
|
4.1
|
25.7
|
1.0
|
CD2
|
C:HIS91
|
4.2
|
14.3
|
1.0
|
CE1
|
C:HIS91
|
4.3
|
14.2
|
1.0
|
ND1
|
C:HIS91
|
4.7
|
13.5
|
1.0
|
CG
|
C:HIS91
|
4.7
|
13.8
|
1.0
|
CB
|
C:SER67
|
4.7
|
19.6
|
1.0
|
CE1
|
C:HIS93
|
4.8
|
10.7
|
1.0
|
C15
|
C:V14302
|
4.8
|
29.6
|
1.0
|
N19
|
C:V14302
|
5.0
|
29.7
|
1.0
|
S7
|
C:V14302
|
5.0
|
21.8
|
1.0
|
|
Fluorine binding site 10 out
of 15 in 4q0l
Go back to
Fluorine Binding Sites List in 4q0l
Fluorine binding site 10 out
of 15 in the Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Crystal Structure of Catalytic Domain of Human Carbonic Anhydrase Isozyme XII with Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F302
b:15.9
occ:0.50
|
F20
|
D:V14302
|
0.0
|
15.9
|
0.5
|
F20
|
D:V14302
|
0.3
|
20.4
|
0.5
|
C5
|
D:V14302
|
1.4
|
15.4
|
0.5
|
C5
|
D:V14302
|
1.6
|
19.7
|
0.5
|
C4
|
D:V14302
|
2.4
|
14.6
|
0.5
|
C6
|
D:V14302
|
2.5
|
15.6
|
0.5
|
C6
|
D:V14302
|
2.5
|
20.1
|
0.5
|
C4
|
D:V14302
|
2.6
|
18.0
|
0.5
|
C14
|
D:V14302
|
2.7
|
21.7
|
0.5
|
N19
|
D:V14302
|
2.9
|
16.5
|
0.5
|
N19
|
D:V14302
|
2.9
|
20.9
|
0.5
|
S7
|
D:V14302
|
2.9
|
13.7
|
0.5
|
O9
|
D:V14302
|
2.9
|
13.0
|
0.5
|
C14
|
D:V14302
|
3.1
|
17.1
|
0.5
|
S7
|
D:V14302
|
3.1
|
16.9
|
0.5
|
O9
|
D:V14302
|
3.2
|
15.6
|
0.5
|
CD2
|
D:LEU197
|
3.2
|
10.9
|
1.0
|
O8
|
D:V14302
|
3.2
|
15.8
|
0.5
|
O8
|
D:V14302
|
3.3
|
12.9
|
0.5
|
CG2
|
D:VAL119
|
3.4
|
11.4
|
1.0
|
C3
|
D:V14302
|
3.6
|
14.7
|
0.5
|
C28
|
D:V14302
|
3.7
|
21.3
|
0.5
|
C1
|
D:V14302
|
3.7
|
15.3
|
0.5
|
C22
|
D:V14302
|
3.8
|
21.7
|
0.5
|
C1
|
D:V14302
|
3.8
|
20.2
|
0.5
|
CG1
|
D:VAL119
|
3.9
|
11.6
|
1.0
|
C3
|
D:V14302
|
3.9
|
18.6
|
0.5
|
C28
|
D:V14302
|
3.9
|
17.3
|
0.5
|
C2
|
D:V14302
|
4.2
|
15.0
|
0.5
|
CB
|
D:VAL119
|
4.2
|
11.7
|
1.0
|
CE1
|
D:HIS91
|
4.3
|
10.1
|
1.0
|
C22
|
D:V14302
|
4.3
|
17.1
|
0.5
|
C2
|
D:V14302
|
4.3
|
19.3
|
0.5
|
N10
|
D:V14302
|
4.6
|
13.0
|
0.5
|
CG
|
D:LEU197
|
4.7
|
10.3
|
1.0
|
C23
|
D:V14302
|
4.7
|
17.2
|
0.5
|
F12
|
D:V14302
|
4.8
|
16.1
|
0.5
|
C23
|
D:V14302
|
4.8
|
21.8
|
0.5
|
N10
|
D:V14302
|
4.8
|
15.4
|
0.5
|
C27
|
D:V14302
|
4.9
|
22.3
|
0.5
|
|
Reference:
V.Dudutiene,
J.Matuliene,
A.Smirnov,
D.D.Timm,
A.Zubriene,
L.Baranauskiene,
V.Morkunaite,
J.Smirnoviene,
V.Michailoviene,
V.Juozapaitiene,
A.Mickeviciute,
J.Kazokaite,
S.Baksyte,
A.Kasiliauskaite,
J.Jachno,
J.Revuckiene,
M.Kisonaite,
V.Pilipuityte,
E.Ivanauskaite,
G.Milinaviciute,
V.Smirnovas,
V.Petrikaite,
V.Kairys,
V.Petrauskas,
P.Norvaisas,
D.Linge,
P.Gibieza,
E.Capkauskaite,
A.Zaksauskas,
E.Kazlauskas,
E.Manakova,
S.Grazulis,
J.E.Ladbury,
D.Matulis.
Discovery and Characterization of Novel Selective Inhibitors of Carbonic Anhydrase IX. J.Med.Chem. V. 57 9435 2014.
ISSN: ISSN 0022-2623
PubMed: 25358084
DOI: 10.1021/JM501003K
Page generated: Thu Aug 1 05:08:51 2024
|