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Fluorine in PDB 4ui6: Crystal Structure of Human Tankyrase 2 in Complex with Ta-47

Enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47

All present enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47, PDB code: 4ui6 was solved by T.Haikarainen, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.21 / 1.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 91.470, 98.350, 119.440, 90.00, 90.00, 90.00
R / Rfree (%) 15.371 / 18.555

Other elements in 4ui6:

The structure of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 (pdb code 4ui6). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47, PDB code: 4ui6:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 4ui6

Go back to Fluorine Binding Sites List in 4ui6
Fluorine binding site 1 out of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2113

b:34.4
occ:1.00
FAV A:ECZ2113 0.0 34.4 1.0
CAT A:ECZ2113 1.4 32.0 1.0
FAW A:ECZ2113 2.1 35.3 1.0
FAU A:ECZ2113 2.3 31.9 1.0
CAQ A:ECZ2113 2.3 23.1 1.0
CAP A:ECZ2113 2.8 19.7 1.0
CE2 A:PHE1035 3.3 26.1 1.0
CAR A:ECZ2113 3.5 22.0 1.0
O A:ALA1049 3.6 22.5 1.0
CD2 A:PHE1035 3.7 24.8 1.0
O A:HIS1048 3.8 19.4 1.0
O A:HOH3122 4.0 17.1 1.0
C A:HIS1048 4.1 20.8 1.0
CAO A:ECZ2113 4.2 18.0 1.0
C A:ALA1049 4.3 21.7 1.0
O A:ARG1047 4.3 26.2 1.0
CA A:HIS1048 4.4 21.4 1.0
CZ A:PHE1035 4.5 28.0 1.0
O A:HOH3132 4.5 32.6 1.0
OG A:SER1033 4.6 16.1 1.0
N A:ALA1049 4.6 21.4 1.0
CAS A:ECZ2113 4.7 18.4 1.0
N A:TYR1050 4.9 21.1 1.0
CAN A:ECZ2113 5.0 17.2 1.0

Fluorine binding site 2 out of 6 in 4ui6

Go back to Fluorine Binding Sites List in 4ui6
Fluorine binding site 2 out of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2113

b:35.3
occ:1.00
FAW A:ECZ2113 0.0 35.3 1.0
CAT A:ECZ2113 1.3 32.0 1.0
FAU A:ECZ2113 2.1 31.9 1.0
FAV A:ECZ2113 2.1 34.4 1.0
CAQ A:ECZ2113 2.3 23.1 1.0
CAR A:ECZ2113 2.7 22.0 1.0
O A:HOH3132 3.1 32.6 1.0
CAP A:ECZ2113 3.6 19.7 1.0
CD1 A:ILE1075 3.7 26.1 1.0
O A:ALA1049 3.8 22.5 1.0
CG1 A:ILE1075 4.0 25.4 1.0
CAS A:ECZ2113 4.1 18.4 1.0
CA A:TYR1050 4.3 20.7 1.0
C A:ALA1049 4.6 21.7 1.0
CD1 A:TYR1050 4.6 18.4 1.0
CAO A:ECZ2113 4.7 18.0 1.0
CE2 A:PHE1035 4.8 26.1 1.0
CB A:TYR1050 4.8 19.1 1.0
N A:TYR1050 4.8 21.1 1.0
O A:HOH3156 4.8 27.8 1.0
CAN A:ECZ2113 5.0 17.2 1.0
CG A:TYR1050 5.0 18.1 1.0

Fluorine binding site 3 out of 6 in 4ui6

Go back to Fluorine Binding Sites List in 4ui6
Fluorine binding site 3 out of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2113

b:31.9
occ:1.00
FAU A:ECZ2113 0.0 31.9 1.0
CAT A:ECZ2113 1.4 32.0 1.0
FAW A:ECZ2113 2.1 35.3 1.0
FAV A:ECZ2113 2.3 34.4 1.0
CAQ A:ECZ2113 2.3 23.1 1.0
CAP A:ECZ2113 3.0 19.7 1.0
CAR A:ECZ2113 3.3 22.0 1.0
CD A:PRO1034 3.6 18.3 1.0
CG A:PRO1034 3.7 20.1 1.0
CE2 A:PHE1035 3.8 26.1 1.0
O A:HOH3156 4.1 27.8 1.0
CAO A:ECZ2113 4.3 18.0 1.0
CG1 A:ILE1075 4.4 25.4 1.0
CD2 A:PHE1035 4.4 24.8 1.0
CZ A:PHE1035 4.4 28.0 1.0
CAS A:ECZ2113 4.5 18.4 1.0
CD1 A:ILE1075 4.7 26.1 1.0
OG A:SER1033 4.8 16.1 1.0
N A:ILE1075 4.9 19.8 1.0
CAN A:ECZ2113 4.9 17.2 1.0
CA A:GLY1074 4.9 19.4 1.0
N A:PRO1034 4.9 17.0 1.0

Fluorine binding site 4 out of 6 in 4ui6

Go back to Fluorine Binding Sites List in 4ui6
Fluorine binding site 4 out of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F2114

b:41.4
occ:1.00
FAV B:ECZ2114 0.0 41.4 1.0
CAT B:ECZ2114 1.4 33.4 1.0
FAW B:ECZ2114 2.2 36.5 1.0
FAU B:ECZ2114 2.3 36.3 1.0
CAQ B:ECZ2114 2.3 25.8 1.0
CAP B:ECZ2114 2.8 22.9 1.0
O B:HOH3112 3.1 45.9 1.0
CE2 B:PHE1035 3.3 31.5 1.0
CAR B:ECZ2114 3.5 23.2 1.0
O B:ALA1049 3.6 25.0 1.0
CD2 B:PHE1035 3.6 29.3 1.0
O B:HIS1048 3.8 23.5 1.0
C B:HIS1048 4.0 25.4 1.0
O B:HOH3108 4.0 17.8 1.0
CAO B:ECZ2114 4.2 19.9 1.0
O B:ARG1047 4.3 28.9 1.0
C B:ALA1049 4.3 25.5 1.0
CA B:HIS1048 4.3 26.3 1.0
CZ B:PHE1035 4.4 34.7 1.0
OG B:SER1033 4.6 18.8 1.0
N B:ALA1049 4.6 25.6 1.0
CAS B:ECZ2114 4.7 20.9 1.0
O B:HOH3115 4.8 34.7 1.0
N B:TYR1050 4.9 24.5 1.0
CAN B:ECZ2114 4.9 19.9 1.0

Fluorine binding site 5 out of 6 in 4ui6

Go back to Fluorine Binding Sites List in 4ui6
Fluorine binding site 5 out of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F2114

b:36.5
occ:1.00
FAW B:ECZ2114 0.0 36.5 1.0
CAT B:ECZ2114 1.3 33.4 1.0
FAU B:ECZ2114 2.2 36.3 1.0
FAV B:ECZ2114 2.2 41.4 1.0
CAQ B:ECZ2114 2.3 25.8 1.0
CAR B:ECZ2114 2.7 23.2 1.0
O B:HOH3115 3.4 34.7 1.0
CAP B:ECZ2114 3.6 22.9 1.0
CD1 B:ILE1075 3.7 26.6 1.0
O B:ALA1049 3.7 25.0 1.0
O B:HOH3112 3.8 45.9 1.0
CG1 B:ILE1075 4.0 24.2 1.0
CAS B:ECZ2114 4.1 20.9 1.0
CA B:TYR1050 4.3 23.9 1.0
C B:ALA1049 4.5 25.5 1.0
CD1 B:TYR1050 4.7 22.5 1.0
CB B:TYR1050 4.7 22.0 1.0
CE2 B:PHE1035 4.7 31.5 1.0
CAO B:ECZ2114 4.7 19.9 1.0
N B:TYR1050 4.8 24.5 1.0
O B:HOH3133 4.9 28.6 1.0
CG B:TYR1050 4.9 22.1 1.0
CAN B:ECZ2114 5.0 19.9 1.0

Fluorine binding site 6 out of 6 in 4ui6

Go back to Fluorine Binding Sites List in 4ui6
Fluorine binding site 6 out of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F2114

b:36.3
occ:1.00
FAU B:ECZ2114 0.0 36.3 1.0
CAT B:ECZ2114 1.4 33.4 1.0
FAW B:ECZ2114 2.2 36.5 1.0
FAV B:ECZ2114 2.3 41.4 1.0
CAQ B:ECZ2114 2.3 25.8 1.0
CAP B:ECZ2114 3.1 22.9 1.0
CAR B:ECZ2114 3.3 23.2 1.0
CE2 B:PHE1035 3.6 31.5 1.0
CG B:PRO1034 3.7 22.8 1.0
CD B:PRO1034 3.7 21.1 1.0
O B:HOH3133 4.1 28.6 1.0
CD2 B:PHE1035 4.3 29.3 1.0
CAO B:ECZ2114 4.3 19.9 1.0
CZ B:PHE1035 4.4 34.7 1.0
CG1 B:ILE1075 4.5 24.2 1.0
CAS B:ECZ2114 4.6 20.9 1.0
CD1 B:ILE1075 4.7 26.6 1.0
OG B:SER1033 4.7 18.8 1.0
O B:HOH3112 4.8 45.9 1.0
N B:ILE1075 4.9 21.0 1.0
CAN B:ECZ2114 5.0 19.9 1.0
CA B:GLY1074 5.0 18.4 1.0

Reference:

A.Nathubhai, T.Haikarainen, P.C.Hayward, S.Munoz-Descalzo, A.S.Thompson, M.D.Lloyd, L.Lehtio, M.D.Threadgill. Structure-Activity Relationships of 2-Arylquinazolin-4-Ones As Highly Selective and Potent Inhibitors of the Tankyrases. Eur.J.Med.Chem. V. 118 316 2016.
ISSN: ISSN 0223-5234
PubMed: 27163581
DOI: 10.1016/J.EJMECH.2016.04.041
Page generated: Thu Aug 1 06:02:58 2024

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