Fluorine in PDB 4ui6: Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
All present enzymatic activity of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47:
2.4.2.30;
Protein crystallography data
The structure of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47, PDB code: 4ui6
was solved by
T.Haikarainen,
L.Lehtio,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.21 /
1.80
|
Space group
|
C 2 2 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
91.470,
98.350,
119.440,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
15.371 /
18.555
|
Other elements in 4ui6:
The structure of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
(pdb code 4ui6). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the
Crystal Structure of Human Tankyrase 2 in Complex with Ta-47, PDB code: 4ui6:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
Fluorine binding site 1 out
of 6 in 4ui6
Go back to
Fluorine Binding Sites List in 4ui6
Fluorine binding site 1 out
of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2113
b:34.4
occ:1.00
|
FAV
|
A:ECZ2113
|
0.0
|
34.4
|
1.0
|
CAT
|
A:ECZ2113
|
1.4
|
32.0
|
1.0
|
FAW
|
A:ECZ2113
|
2.1
|
35.3
|
1.0
|
FAU
|
A:ECZ2113
|
2.3
|
31.9
|
1.0
|
CAQ
|
A:ECZ2113
|
2.3
|
23.1
|
1.0
|
CAP
|
A:ECZ2113
|
2.8
|
19.7
|
1.0
|
CE2
|
A:PHE1035
|
3.3
|
26.1
|
1.0
|
CAR
|
A:ECZ2113
|
3.5
|
22.0
|
1.0
|
O
|
A:ALA1049
|
3.6
|
22.5
|
1.0
|
CD2
|
A:PHE1035
|
3.7
|
24.8
|
1.0
|
O
|
A:HIS1048
|
3.8
|
19.4
|
1.0
|
O
|
A:HOH3122
|
4.0
|
17.1
|
1.0
|
C
|
A:HIS1048
|
4.1
|
20.8
|
1.0
|
CAO
|
A:ECZ2113
|
4.2
|
18.0
|
1.0
|
C
|
A:ALA1049
|
4.3
|
21.7
|
1.0
|
O
|
A:ARG1047
|
4.3
|
26.2
|
1.0
|
CA
|
A:HIS1048
|
4.4
|
21.4
|
1.0
|
CZ
|
A:PHE1035
|
4.5
|
28.0
|
1.0
|
O
|
A:HOH3132
|
4.5
|
32.6
|
1.0
|
OG
|
A:SER1033
|
4.6
|
16.1
|
1.0
|
N
|
A:ALA1049
|
4.6
|
21.4
|
1.0
|
CAS
|
A:ECZ2113
|
4.7
|
18.4
|
1.0
|
N
|
A:TYR1050
|
4.9
|
21.1
|
1.0
|
CAN
|
A:ECZ2113
|
5.0
|
17.2
|
1.0
|
|
Fluorine binding site 2 out
of 6 in 4ui6
Go back to
Fluorine Binding Sites List in 4ui6
Fluorine binding site 2 out
of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2113
b:35.3
occ:1.00
|
FAW
|
A:ECZ2113
|
0.0
|
35.3
|
1.0
|
CAT
|
A:ECZ2113
|
1.3
|
32.0
|
1.0
|
FAU
|
A:ECZ2113
|
2.1
|
31.9
|
1.0
|
FAV
|
A:ECZ2113
|
2.1
|
34.4
|
1.0
|
CAQ
|
A:ECZ2113
|
2.3
|
23.1
|
1.0
|
CAR
|
A:ECZ2113
|
2.7
|
22.0
|
1.0
|
O
|
A:HOH3132
|
3.1
|
32.6
|
1.0
|
CAP
|
A:ECZ2113
|
3.6
|
19.7
|
1.0
|
CD1
|
A:ILE1075
|
3.7
|
26.1
|
1.0
|
O
|
A:ALA1049
|
3.8
|
22.5
|
1.0
|
CG1
|
A:ILE1075
|
4.0
|
25.4
|
1.0
|
CAS
|
A:ECZ2113
|
4.1
|
18.4
|
1.0
|
CA
|
A:TYR1050
|
4.3
|
20.7
|
1.0
|
C
|
A:ALA1049
|
4.6
|
21.7
|
1.0
|
CD1
|
A:TYR1050
|
4.6
|
18.4
|
1.0
|
CAO
|
A:ECZ2113
|
4.7
|
18.0
|
1.0
|
CE2
|
A:PHE1035
|
4.8
|
26.1
|
1.0
|
CB
|
A:TYR1050
|
4.8
|
19.1
|
1.0
|
N
|
A:TYR1050
|
4.8
|
21.1
|
1.0
|
O
|
A:HOH3156
|
4.8
|
27.8
|
1.0
|
CAN
|
A:ECZ2113
|
5.0
|
17.2
|
1.0
|
CG
|
A:TYR1050
|
5.0
|
18.1
|
1.0
|
|
Fluorine binding site 3 out
of 6 in 4ui6
Go back to
Fluorine Binding Sites List in 4ui6
Fluorine binding site 3 out
of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2113
b:31.9
occ:1.00
|
FAU
|
A:ECZ2113
|
0.0
|
31.9
|
1.0
|
CAT
|
A:ECZ2113
|
1.4
|
32.0
|
1.0
|
FAW
|
A:ECZ2113
|
2.1
|
35.3
|
1.0
|
FAV
|
A:ECZ2113
|
2.3
|
34.4
|
1.0
|
CAQ
|
A:ECZ2113
|
2.3
|
23.1
|
1.0
|
CAP
|
A:ECZ2113
|
3.0
|
19.7
|
1.0
|
CAR
|
A:ECZ2113
|
3.3
|
22.0
|
1.0
|
CD
|
A:PRO1034
|
3.6
|
18.3
|
1.0
|
CG
|
A:PRO1034
|
3.7
|
20.1
|
1.0
|
CE2
|
A:PHE1035
|
3.8
|
26.1
|
1.0
|
O
|
A:HOH3156
|
4.1
|
27.8
|
1.0
|
CAO
|
A:ECZ2113
|
4.3
|
18.0
|
1.0
|
CG1
|
A:ILE1075
|
4.4
|
25.4
|
1.0
|
CD2
|
A:PHE1035
|
4.4
|
24.8
|
1.0
|
CZ
|
A:PHE1035
|
4.4
|
28.0
|
1.0
|
CAS
|
A:ECZ2113
|
4.5
|
18.4
|
1.0
|
CD1
|
A:ILE1075
|
4.7
|
26.1
|
1.0
|
OG
|
A:SER1033
|
4.8
|
16.1
|
1.0
|
N
|
A:ILE1075
|
4.9
|
19.8
|
1.0
|
CAN
|
A:ECZ2113
|
4.9
|
17.2
|
1.0
|
CA
|
A:GLY1074
|
4.9
|
19.4
|
1.0
|
N
|
A:PRO1034
|
4.9
|
17.0
|
1.0
|
|
Fluorine binding site 4 out
of 6 in 4ui6
Go back to
Fluorine Binding Sites List in 4ui6
Fluorine binding site 4 out
of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F2114
b:41.4
occ:1.00
|
FAV
|
B:ECZ2114
|
0.0
|
41.4
|
1.0
|
CAT
|
B:ECZ2114
|
1.4
|
33.4
|
1.0
|
FAW
|
B:ECZ2114
|
2.2
|
36.5
|
1.0
|
FAU
|
B:ECZ2114
|
2.3
|
36.3
|
1.0
|
CAQ
|
B:ECZ2114
|
2.3
|
25.8
|
1.0
|
CAP
|
B:ECZ2114
|
2.8
|
22.9
|
1.0
|
O
|
B:HOH3112
|
3.1
|
45.9
|
1.0
|
CE2
|
B:PHE1035
|
3.3
|
31.5
|
1.0
|
CAR
|
B:ECZ2114
|
3.5
|
23.2
|
1.0
|
O
|
B:ALA1049
|
3.6
|
25.0
|
1.0
|
CD2
|
B:PHE1035
|
3.6
|
29.3
|
1.0
|
O
|
B:HIS1048
|
3.8
|
23.5
|
1.0
|
C
|
B:HIS1048
|
4.0
|
25.4
|
1.0
|
O
|
B:HOH3108
|
4.0
|
17.8
|
1.0
|
CAO
|
B:ECZ2114
|
4.2
|
19.9
|
1.0
|
O
|
B:ARG1047
|
4.3
|
28.9
|
1.0
|
C
|
B:ALA1049
|
4.3
|
25.5
|
1.0
|
CA
|
B:HIS1048
|
4.3
|
26.3
|
1.0
|
CZ
|
B:PHE1035
|
4.4
|
34.7
|
1.0
|
OG
|
B:SER1033
|
4.6
|
18.8
|
1.0
|
N
|
B:ALA1049
|
4.6
|
25.6
|
1.0
|
CAS
|
B:ECZ2114
|
4.7
|
20.9
|
1.0
|
O
|
B:HOH3115
|
4.8
|
34.7
|
1.0
|
N
|
B:TYR1050
|
4.9
|
24.5
|
1.0
|
CAN
|
B:ECZ2114
|
4.9
|
19.9
|
1.0
|
|
Fluorine binding site 5 out
of 6 in 4ui6
Go back to
Fluorine Binding Sites List in 4ui6
Fluorine binding site 5 out
of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F2114
b:36.5
occ:1.00
|
FAW
|
B:ECZ2114
|
0.0
|
36.5
|
1.0
|
CAT
|
B:ECZ2114
|
1.3
|
33.4
|
1.0
|
FAU
|
B:ECZ2114
|
2.2
|
36.3
|
1.0
|
FAV
|
B:ECZ2114
|
2.2
|
41.4
|
1.0
|
CAQ
|
B:ECZ2114
|
2.3
|
25.8
|
1.0
|
CAR
|
B:ECZ2114
|
2.7
|
23.2
|
1.0
|
O
|
B:HOH3115
|
3.4
|
34.7
|
1.0
|
CAP
|
B:ECZ2114
|
3.6
|
22.9
|
1.0
|
CD1
|
B:ILE1075
|
3.7
|
26.6
|
1.0
|
O
|
B:ALA1049
|
3.7
|
25.0
|
1.0
|
O
|
B:HOH3112
|
3.8
|
45.9
|
1.0
|
CG1
|
B:ILE1075
|
4.0
|
24.2
|
1.0
|
CAS
|
B:ECZ2114
|
4.1
|
20.9
|
1.0
|
CA
|
B:TYR1050
|
4.3
|
23.9
|
1.0
|
C
|
B:ALA1049
|
4.5
|
25.5
|
1.0
|
CD1
|
B:TYR1050
|
4.7
|
22.5
|
1.0
|
CB
|
B:TYR1050
|
4.7
|
22.0
|
1.0
|
CE2
|
B:PHE1035
|
4.7
|
31.5
|
1.0
|
CAO
|
B:ECZ2114
|
4.7
|
19.9
|
1.0
|
N
|
B:TYR1050
|
4.8
|
24.5
|
1.0
|
O
|
B:HOH3133
|
4.9
|
28.6
|
1.0
|
CG
|
B:TYR1050
|
4.9
|
22.1
|
1.0
|
CAN
|
B:ECZ2114
|
5.0
|
19.9
|
1.0
|
|
Fluorine binding site 6 out
of 6 in 4ui6
Go back to
Fluorine Binding Sites List in 4ui6
Fluorine binding site 6 out
of 6 in the Crystal Structure of Human Tankyrase 2 in Complex with Ta-47
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Human Tankyrase 2 in Complex with Ta-47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F2114
b:36.3
occ:1.00
|
FAU
|
B:ECZ2114
|
0.0
|
36.3
|
1.0
|
CAT
|
B:ECZ2114
|
1.4
|
33.4
|
1.0
|
FAW
|
B:ECZ2114
|
2.2
|
36.5
|
1.0
|
FAV
|
B:ECZ2114
|
2.3
|
41.4
|
1.0
|
CAQ
|
B:ECZ2114
|
2.3
|
25.8
|
1.0
|
CAP
|
B:ECZ2114
|
3.1
|
22.9
|
1.0
|
CAR
|
B:ECZ2114
|
3.3
|
23.2
|
1.0
|
CE2
|
B:PHE1035
|
3.6
|
31.5
|
1.0
|
CG
|
B:PRO1034
|
3.7
|
22.8
|
1.0
|
CD
|
B:PRO1034
|
3.7
|
21.1
|
1.0
|
O
|
B:HOH3133
|
4.1
|
28.6
|
1.0
|
CD2
|
B:PHE1035
|
4.3
|
29.3
|
1.0
|
CAO
|
B:ECZ2114
|
4.3
|
19.9
|
1.0
|
CZ
|
B:PHE1035
|
4.4
|
34.7
|
1.0
|
CG1
|
B:ILE1075
|
4.5
|
24.2
|
1.0
|
CAS
|
B:ECZ2114
|
4.6
|
20.9
|
1.0
|
CD1
|
B:ILE1075
|
4.7
|
26.6
|
1.0
|
OG
|
B:SER1033
|
4.7
|
18.8
|
1.0
|
O
|
B:HOH3112
|
4.8
|
45.9
|
1.0
|
N
|
B:ILE1075
|
4.9
|
21.0
|
1.0
|
CAN
|
B:ECZ2114
|
5.0
|
19.9
|
1.0
|
CA
|
B:GLY1074
|
5.0
|
18.4
|
1.0
|
|
Reference:
A.Nathubhai,
T.Haikarainen,
P.C.Hayward,
S.Munoz-Descalzo,
A.S.Thompson,
M.D.Lloyd,
L.Lehtio,
M.D.Threadgill.
Structure-Activity Relationships of 2-Arylquinazolin-4-Ones As Highly Selective and Potent Inhibitors of the Tankyrases. Eur.J.Med.Chem. V. 118 316 2016.
ISSN: ISSN 0223-5234
PubMed: 27163581
DOI: 10.1016/J.EJMECH.2016.04.041
Page generated: Thu Aug 1 06:02:58 2024
|