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Fluorine in PDB 4xv3: B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922

Enzymatic activity of B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922

All present enzymatic activity of B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922:
2.7.11.1;

Protein crystallography data

The structure of B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922, PDB code: 4xv3 was solved by Y.Zhang, C.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.66 / 2.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.945, 105.448, 111.314, 90.00, 90.00, 90.00
R / Rfree (%) 25.8 / 29.6

Fluorine Binding Sites:

The binding sites of Fluorine atom in the B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922 (pdb code 4xv3). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922, PDB code: 4xv3:

Fluorine binding site 1 out of 1 in 4xv3

Go back to Fluorine Binding Sites List in 4xv3
Fluorine binding site 1 out of 1 in the B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX7922 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F801

b:68.8
occ:1.00
F35 A:P02801 0.0 68.8 1.0
C34 A:P02801 1.3 68.0 1.0
C31 A:P02801 2.3 67.7 1.0
C24 A:P02801 2.4 67.4 1.0
C23 A:P02801 2.7 67.8 1.0
N32 A:P02801 2.7 68.3 1.0
N36 A:P02801 2.7 68.2 1.0
N A:ASP594 3.1 44.5 1.0
CB A:ASP594 3.5 43.6 1.0
CA A:ASP594 3.6 43.1 1.0
C29 A:P02801 3.6 66.9 1.0
C25 A:P02801 3.6 66.6 1.0
C22 A:P02801 3.7 67.9 1.0
C37 A:P02801 3.7 68.6 1.0
C A:GLY593 3.9 45.7 1.0
CZ A:PHE583 4.0 50.8 1.0
CD2 A:LEU514 4.1 30.1 1.0
C27 A:P02801 4.1 66.3 1.0
CA A:GLY593 4.1 45.3 1.0
CE2 A:PHE583 4.1 51.7 1.0
NZ A:LYS483 4.2 37.4 1.0
S15 A:P02801 4.2 68.1 1.0
C43 A:P02801 4.3 69.2 1.0
CG A:ASP594 4.3 48.5 1.0
S51 A:P02801 4.5 68.5 1.0
CE A:LYS483 4.6 36.6 1.0
OD1 A:ASP594 4.6 49.9 1.0
O12 A:P02801 4.6 68.9 1.0
C21 A:P02801 4.6 67.5 1.0
C38 A:P02801 4.6 69.0 1.0
C52 A:P02801 4.6 67.2 1.0
O13 A:P02801 4.7 67.4 1.0
O A:GLY593 4.8 47.8 1.0

Reference:

C.Zhang, W.Spevak, Y.Zhang, E.A.Burton, Y.Ma, G.Habets, J.Zhang, J.Lin, T.Ewing, B.Matusow, G.Tsang, A.Marimuthu, H.Cho, G.Wu, W.Wang, D.Fong, H.Nguyen, S.Shi, P.Womack, M.Nespi, R.Shellooe, H.Carias, B.Powell, E.Light, L.Sanftner, J.Walters, J.Tsai, B.L.West, G.Visor, H.Rezaei, P.S.Lin, K.Nolop, P.N.Ibrahim, P.Hirth, G.Bollag. Raf Inhibitors That Evade Paradoxical Mapk Pathway Activation. Nature V. 526 583 2015.
ISSN: ESSN 1476-4687
PubMed: 26466569
DOI: 10.1038/NATURE14982
Page generated: Sun Dec 13 12:15:25 2020

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