Atomistry » Fluorine » PDB 4xyf-4ymo » 4yjv
Atomistry »
  Fluorine »
    PDB 4xyf-4ymo »
      4yjv »

Fluorine in PDB 4yjv: The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250

Enzymatic activity of The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250

All present enzymatic activity of The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250:
2.7.10.2;

Protein crystallography data

The structure of The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250, PDB code: 4yjv was solved by D.O.Somers, M.Neu, J.Stuckey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.59 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.460, 86.940, 40.430, 90.00, 92.59, 90.00
R / Rfree (%) 17.5 / 22.2

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250 (pdb code 4yjv). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250, PDB code: 4yjv:

Fluorine binding site 1 out of 1 in 4yjv

Go back to Fluorine Binding Sites List in 4yjv
Fluorine binding site 1 out of 1 in the The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F701

b:15.2
occ:1.00
F1 A:4DT701 0.0 15.2 1.0
C23 A:4DT701 1.3 14.6 1.0
C22 A:4DT701 2.3 13.9 1.0
C10 A:4DT701 2.4 14.2 1.0
H24 A:4DT701 2.6 13.8 0.0
C3 A:4DT701 2.8 15.9 1.0
N1 A:4DT701 2.9 16.5 1.0
CB A:MET448 3.1 16.1 1.0
C4 A:4DT701 3.2 16.0 1.0
CG A:MET448 3.3 21.2 1.0
C9 A:4DT701 3.3 18.5 1.0
H6 A:4DT701 3.5 15.9 0.0
CG1 A:VAL433 3.5 18.0 1.0
N8 A:4DT701 3.6 15.3 1.0
N4 A:4DT701 3.6 14.8 1.0
C8 A:4DT701 3.9 24.8 1.0
O A:HOH1066 3.9 27.5 1.0
C5 A:4DT701 4.0 17.7 1.0
C7 A:4DT701 4.0 18.6 1.0
C11 A:4DT701 4.0 14.1 1.0
H10 A:4DT701 4.1 24.7 0.0
CD1 A:LEU501 4.1 15.4 1.0
C6 A:4DT701 4.3 16.4 1.0
C2 A:4DT701 4.4 19.0 1.0
CE A:MET448 4.4 20.6 1.0
O A:GLU449 4.4 15.0 1.0
CB A:ALA400 4.4 13.7 1.0
CB A:VAL433 4.5 16.1 1.0
CG2 A:VAL433 4.6 15.7 1.0
CA A:MET448 4.6 13.6 1.0
H7 A:4DT701 4.6 17.6 0.0
SD A:MET448 4.7 26.8 1.0
N3 A:4DT701 4.8 27.2 1.0
N2 A:4DT701 4.8 25.3 1.0
H__2 A:4DT701 4.9 21.9 0.0
H__3 A:4DT701 4.9 21.9 0.0
H__4 A:4DT701 4.9 19.0 0.0
H__5 A:4DT701 4.9 19.0 0.0
O A:ALA400 4.9 15.8 1.0
C1 A:4DT701 5.0 21.9 1.0
C A:MET448 5.0 14.5 1.0
CB A:SER511 5.0 14.1 1.0

Reference:

D.O.Somers, M.Neu, J.Stuckey. The Kinase Domain of Human Spleen Tyrosine (Syk) in Complex with GTC000250 To Be Published.
Page generated: Thu Aug 1 07:00:30 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy