Atomistry » Fluorine » PDB 4ymq-4zg9 » 4zab
Atomistry »
  Fluorine »
    PDB 4ymq-4zg9 »
      4zab »

Fluorine in PDB 4zab: Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid

Enzymatic activity of Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid

All present enzymatic activity of Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid:
4.1.1.61;

Protein crystallography data

The structure of Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid, PDB code: 4zab was solved by K.A.P.Payne, D.Leys, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.28 / 1.16
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 95.910, 64.200, 87.790, 90.00, 90.00, 90.00
R / Rfree (%) 14.6 / 15.4

Other elements in 4zab:

The structure of Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid also contains other interesting chemical elements:

Potassium (K) 2 atoms
Manganese (Mn) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid (pdb code 4zab). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid, PDB code: 4zab:

Fluorine binding site 1 out of 1 in 4zab

Go back to Fluorine Binding Sites List in 4zab
Fluorine binding site 1 out of 1 in the Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of A. Niger FDC1 in Complex with Alpha-Fluoro Cinnamic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F606

b:22.2
occ:1.00
 F1 A:4LW606 0.0 22.2 1.0
CA A:4LW606 1.4 18.6 1.0
C A:4LW606 2.3 19.2 1.0
CB A:4LW606 2.4 19.1 1.0
OXT A:4LW606 2.6 20.4 1.0
CD2 A:4LW606 2.9 14.9 1.0
CG A:4LW606 3.0 15.0 1.0
SD A:MET283 3.1 8.8 1.0
CG A:MET283 3.3 9.0 1.0
O A:4LW606 3.5 23.2 1.0
CB A:MET283 3.6 8.5 1.0
C1 A:4LU601 3.8 13.0 0.5
N5 A:4LU601 4.0 9.7 0.5
C5 A:FZZ602 4.0 11.7 0.5
CD2 A:LEU439 4.0 21.1 0.5
C4 A:FZZ602 4.0 12.5 0.5
N3 A:FZZ602 4.0 8.7 0.5
CD1 A:ILE327 4.1 9.2 1.0
C3 A:4LU601 4.1 7.3 0.5
CE2 A:4LW606 4.2 19.6 1.0
N A:MET283 4.3 9.4 1.0
CD1 A:4LW606 4.3 13.8 1.0
C4A A:4LU601 4.6 9.2 0.5
CD1 A:LEU439 4.6 16.9 0.5
C5A A:4LU601 4.6 7.1 0.5
CA A:MET283 4.6 8.8 1.0
C15 A:FZZ602 4.6 9.4 0.5
CG2 A:THR323 4.7 8.7 1.0
CE A:MET283 4.8 10.5 1.0
C3 A:FZZ602 4.8 8.6 0.5
CZ A:PHE437 4.8 9.5 1.0
C10 A:4LU601 5.0 7.0 0.5
C17 A:FZZ602 5.0 9.3 0.5
N4 A:FZZ602 5.0 8.7 0.5

Reference:

K.A.Payne, M.D.White, K.Fisher, B.Khara, S.S.Bailey, D.Parker, N.J.Rattray, D.K.Trivedi, R.Goodacre, R.Beveridge, P.Barran, S.E.Rigby, N.S.Scrutton, S.Hay, D.Leys. New Cofactor Supports Alpha , Beta-Unsaturated Acid Decarboxylation Via 1,3-Dipolar Cycloaddition. Nature V. 522 502 2015.
ISSN: ESSN 1476-4687
PubMed: 26083754
DOI: 10.1038/NATURE14560
Page generated: Thu Aug 1 07:11:55 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy