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Fluorine in PDB 5dqq: Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana

Protein crystallography data

The structure of Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana, PDB code: 5dqq was solved by A.F.Kintzer, R.M.Stroud, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.70 / 2.87
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 88.180, 154.810, 219.770, 90.00, 90.00, 90.00
R / Rfree (%) 29.7 / 33.9

Other elements in 5dqq:

The structure of Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana also contains other interesting chemical elements:

Calcium (Ca) 7 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana (pdb code 5dqq). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana, PDB code: 5dqq:

Fluorine binding site 1 out of 1 in 5dqq

Go back to Fluorine Binding Sites List in 5dqq
Fluorine binding site 1 out of 1 in the Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F809

b:0.2
occ:1.00
F07 A:66R809 0.0 0.2 1.0
C03 A:66R809 1.4 0.1 1.0
C04 A:66R809 2.4 0.2 1.0
C02 A:66R809 2.4 0.9 1.0
C13 A:66R809 2.9 0.5 1.0
N08 A:66R809 3.0 0.9 1.0
C05 A:66R809 3.6 0.6 1.0
C01 A:66R809 3.7 0.2 1.0
C06 A:66R809 4.2 0.7 1.0
C12 A:66R809 4.3 0.1 1.0
C09 A:66R809 4.4 0.8 1.0
CD2 A:LEU255 5.0 83.1 1.0

Reference:

A.F.Kintzer, R.M.Stroud. Structure, Inhibition and Regulation of Two-Pore Channel TPC1 From Arabidopsis Thaliana Nature V. 531 258 2016.
ISSN: ESSN 1476-4687
Page generated: Sun Dec 13 12:21:03 2020

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