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Fluorine in PDB 5ds3: Crystal Structure of Constitutively Active Parp-1

Enzymatic activity of Crystal Structure of Constitutively Active Parp-1

All present enzymatic activity of Crystal Structure of Constitutively Active Parp-1:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Constitutively Active Parp-1, PDB code: 5ds3 was solved by M.F.Langelier, J.M.Pascal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.58 / 2.60
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 93.405, 93.405, 134.197, 90.00, 90.00, 120.00
R / Rfree (%) 20 / 25.1

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Constitutively Active Parp-1 (pdb code 5ds3). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Constitutively Active Parp-1, PDB code: 5ds3:

Fluorine binding site 1 out of 1 in 5ds3

Go back to Fluorine Binding Sites List in 5ds3
Fluorine binding site 1 out of 1 in the Crystal Structure of Constitutively Active Parp-1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Constitutively Active Parp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1102

b:39.3
occ:1.00
FAA A:09L1102 0.0 39.3 1.0
CAU A:09L1102 1.3 39.2 1.0
CAX A:09L1102 2.3 40.2 1.0
CAR A:09L1102 2.4 37.6 1.0
CAQ A:09L1102 2.9 37.8 1.0
CAO A:09L1102 3.0 40.1 1.0
NAF A:09L1102 3.1 38.7 1.0
O A:HOH1219 3.1 52.1 1.0
O A:GLY894 3.2 42.5 1.0
CE1 A:TYR896 3.3 37.2 1.0
CE2 A:TYR889 3.4 47.0 1.0
CD1 A:TYR896 3.4 36.5 1.0
CD2 A:TYR889 3.5 47.3 1.0
CAW A:09L1102 3.6 39.8 1.0
CAS A:09L1102 3.6 36.5 1.0
OAC A:09L1102 3.8 37.2 1.0
CAT A:09L1102 4.1 37.8 1.0
C A:GLY894 4.3 42.4 1.0
CZ A:TYR896 4.3 38.0 1.0
CAP A:09L1102 4.4 39.4 1.0
CAM A:09L1102 4.5 40.9 1.0
CG A:TYR896 4.5 36.5 1.0
N A:GLY894 4.5 45.8 1.0
O A:HOH1224 4.5 51.6 1.0
CZ A:TYR889 4.6 48.4 1.0
O A:GLY892 4.8 43.1 1.0
CG A:TYR889 4.9 50.2 1.0
OH A:TYR896 4.9 39.3 1.0

Reference:

J.M.Dawicki-Mckenna, M.F.Langelier, J.E.Denizio, A.A.Riccio, C.D.Cao, K.R.Karch, M.Mccauley, J.D.Steffen, B.E.Black, J.M.Pascal. Parp-1 Activation Requires Local Unfolding of An Autoinhibitory Domain. Mol.Cell V. 60 755 2015.
ISSN: ISSN 1097-2765
PubMed: 26626480
DOI: 10.1016/J.MOLCEL.2015.10.013
Page generated: Sun Dec 13 12:21:06 2020

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