Fluorine in PDB 5e2m: Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Enzymatic activity of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
All present enzymatic activity of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide:
4.2.1.1;
Protein crystallography data
The structure of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide, PDB code: 5e2m
was solved by
E.Manakova,
A.Smirnov,
S.Grazulis,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
61.52 /
1.41
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
63.264,
71.710,
119.722,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
18.2 /
20.7
|
Other elements in 5e2m:
The structure of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
(pdb code 5e2m). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 9 binding sites of Fluorine where determined in the
Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide, PDB code: 5e2m:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
Fluorine binding site 1 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 1 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:20.6
occ:0.50
|
F20
|
A:V14302
|
0.0
|
20.6
|
0.5
|
C5
|
A:V14302
|
0.6
|
23.3
|
0.5
|
F20
|
A:V14302
|
0.8
|
22.2
|
0.5
|
C5
|
A:V14302
|
1.3
|
19.3
|
0.5
|
C6
|
A:V14302
|
1.7
|
28.5
|
0.5
|
C4
|
A:V14302
|
1.8
|
24.3
|
0.5
|
C4
|
A:V14302
|
2.4
|
17.0
|
0.5
|
N19
|
A:V14302
|
2.4
|
26.5
|
0.5
|
C6
|
A:V14302
|
2.4
|
20.5
|
0.5
|
O9
|
A:V14302
|
2.7
|
14.9
|
0.5
|
N19
|
A:V14302
|
2.9
|
21.7
|
0.5
|
C1
|
A:V14302
|
2.9
|
28.5
|
0.5
|
C14
|
A:V14302
|
2.9
|
24.9
|
0.5
|
C3
|
A:V14302
|
3.0
|
26.2
|
0.5
|
S7
|
A:V14302
|
3.0
|
23.7
|
0.5
|
O9
|
A:V14302
|
3.0
|
24.3
|
0.5
|
S7
|
A:V14302
|
3.0
|
17.0
|
0.5
|
C14
|
A:V14302
|
3.3
|
31.5
|
0.5
|
C28
|
A:V14302
|
3.3
|
24.3
|
0.5
|
C2
|
A:V14302
|
3.3
|
25.0
|
0.5
|
C3
|
A:V14302
|
3.6
|
18.1
|
0.5
|
O8
|
A:V14302
|
3.6
|
15.0
|
0.5
|
C1
|
A:V14302
|
3.7
|
20.9
|
0.5
|
CD2
|
A:LEU198
|
3.7
|
16.6
|
1.0
|
C28
|
A:V14302
|
3.8
|
29.9
|
0.5
|
O8
|
A:V14302
|
3.9
|
22.3
|
0.5
|
CE1
|
A:HIS94
|
4.0
|
12.3
|
1.0
|
C2
|
A:V14302
|
4.1
|
19.3
|
0.5
|
F12
|
A:V14302
|
4.2
|
24.3
|
0.5
|
N10
|
A:V14302
|
4.2
|
17.0
|
0.5
|
C22
|
A:V14302
|
4.3
|
25.4
|
0.5
|
C27
|
A:V14302
|
4.4
|
26.5
|
0.5
|
OE1
|
A:GLN92
|
4.5
|
15.8
|
1.0
|
N10
|
A:V14302
|
4.5
|
16.6
|
0.5
|
S11
|
A:V14302
|
4.6
|
34.6
|
0.5
|
C22
|
A:V14302
|
4.7
|
31.3
|
0.5
|
F13
|
A:V14302
|
4.7
|
26.9
|
0.5
|
F12
|
A:V14302
|
4.7
|
21.1
|
0.5
|
ND1
|
A:HIS94
|
4.8
|
13.0
|
1.0
|
NE2
|
A:HIS94
|
4.9
|
12.5
|
1.0
|
O17
|
A:V14302
|
4.9
|
32.5
|
0.5
|
CB
|
A:ALA121
|
4.9
|
12.4
|
1.0
|
CZ
|
A:PHE91
|
4.9
|
13.8
|
1.0
|
CG
|
A:LEU198
|
5.0
|
16.8
|
1.0
|
|
Fluorine binding site 2 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 2 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:22.2
occ:0.50
|
F20
|
A:V14302
|
0.0
|
22.2
|
0.5
|
F20
|
A:V14302
|
0.8
|
20.6
|
0.5
|
C5
|
A:V14302
|
1.4
|
23.3
|
0.5
|
C5
|
A:V14302
|
1.9
|
19.3
|
0.5
|
C6
|
A:V14302
|
2.3
|
28.5
|
0.5
|
C4
|
A:V14302
|
2.4
|
24.3
|
0.5
|
N19
|
A:V14302
|
2.6
|
26.5
|
0.5
|
O9
|
A:V14302
|
2.7
|
14.9
|
0.5
|
C4
|
A:V14302
|
2.8
|
17.0
|
0.5
|
O9
|
A:V14302
|
2.8
|
24.3
|
0.5
|
C6
|
A:V14302
|
2.9
|
20.5
|
0.5
|
N19
|
A:V14302
|
3.2
|
21.7
|
0.5
|
S7
|
A:V14302
|
3.2
|
23.7
|
0.5
|
S7
|
A:V14302
|
3.3
|
17.0
|
0.5
|
C14
|
A:V14302
|
3.3
|
24.9
|
0.5
|
C14
|
A:V14302
|
3.5
|
31.5
|
0.5
|
CE1
|
A:HIS94
|
3.6
|
12.3
|
1.0
|
C1
|
A:V14302
|
3.6
|
28.5
|
0.5
|
C3
|
A:V14302
|
3.7
|
26.2
|
0.5
|
OE1
|
A:GLN92
|
3.9
|
15.8
|
1.0
|
C28
|
A:V14302
|
4.0
|
24.3
|
0.5
|
C3
|
A:V14302
|
4.0
|
18.1
|
0.5
|
O8
|
A:V14302
|
4.1
|
15.0
|
0.5
|
C1
|
A:V14302
|
4.1
|
20.9
|
0.5
|
C2
|
A:V14302
|
4.1
|
25.0
|
0.5
|
C28
|
A:V14302
|
4.1
|
29.9
|
0.5
|
CB
|
A:ALA121
|
4.2
|
12.4
|
1.0
|
O8
|
A:V14302
|
4.2
|
22.3
|
0.5
|
ND1
|
A:HIS94
|
4.3
|
13.0
|
1.0
|
CD2
|
A:LEU198
|
4.3
|
16.6
|
1.0
|
N10
|
A:V14302
|
4.4
|
17.0
|
0.5
|
CZ
|
A:PHE91
|
4.5
|
13.8
|
1.0
|
C22
|
A:V14302
|
4.5
|
25.4
|
0.5
|
C2
|
A:V14302
|
4.6
|
19.3
|
0.5
|
NE2
|
A:HIS94
|
4.6
|
12.5
|
1.0
|
N10
|
A:V14302
|
4.7
|
16.6
|
0.5
|
CE2
|
A:PHE91
|
4.8
|
14.2
|
1.0
|
C22
|
A:V14302
|
4.8
|
31.3
|
0.5
|
CD
|
A:GLN92
|
4.8
|
15.7
|
1.0
|
F12
|
A:V14302
|
4.8
|
24.3
|
0.5
|
C27
|
A:V14302
|
4.9
|
26.5
|
0.5
|
|
Fluorine binding site 3 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 3 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:21.1
occ:0.50
|
F12
|
A:V14302
|
0.0
|
21.1
|
0.5
|
C3
|
A:V14302
|
1.3
|
18.1
|
0.5
|
C2
|
A:V14302
|
2.3
|
19.3
|
0.5
|
F12
|
A:V14302
|
2.4
|
24.3
|
0.5
|
C4
|
A:V14302
|
2.4
|
17.0
|
0.5
|
F13
|
A:V14302
|
2.5
|
21.4
|
0.5
|
N10
|
A:V14302
|
2.5
|
17.0
|
0.5
|
C3
|
A:V14302
|
2.7
|
26.2
|
0.5
|
N10
|
A:V14302
|
2.7
|
16.6
|
0.5
|
S7
|
A:V14302
|
3.1
|
17.0
|
0.5
|
C4
|
A:V14302
|
3.2
|
24.3
|
0.5
|
CB
|
A:HIS200
|
3.3
|
21.4
|
1.0
|
S7
|
A:V14302
|
3.4
|
23.7
|
0.5
|
C2
|
A:V14302
|
3.4
|
25.0
|
0.5
|
CE1
|
A:HIS96
|
3.5
|
12.2
|
1.0
|
OG1
|
A:THR199
|
3.5
|
15.6
|
1.0
|
C1
|
A:V14302
|
3.6
|
20.9
|
0.5
|
ZN
|
A:ZN301
|
3.6
|
12.4
|
1.0
|
C5
|
A:V14302
|
3.6
|
19.3
|
0.5
|
O8
|
A:V14302
|
3.7
|
15.0
|
0.5
|
O
|
A:HOH489
|
3.8
|
24.0
|
1.0
|
F13
|
A:V14302
|
3.8
|
26.9
|
0.5
|
NE2
|
A:HIS96
|
3.9
|
12.3
|
1.0
|
N
|
A:HIS200
|
4.0
|
16.7
|
1.0
|
C6
|
A:V14302
|
4.1
|
20.5
|
0.5
|
O
|
A:HOH409
|
4.2
|
16.3
|
1.0
|
NE2
|
A:HIS94
|
4.2
|
12.5
|
1.0
|
C5
|
A:V14302
|
4.2
|
23.3
|
0.5
|
CG
|
A:HIS200
|
4.3
|
25.4
|
1.0
|
CA
|
A:HIS200
|
4.3
|
20.6
|
1.0
|
O
|
A:HOH529
|
4.3
|
18.5
|
1.0
|
O8
|
A:V14302
|
4.3
|
22.3
|
0.5
|
C
|
A:THR199
|
4.3
|
17.9
|
1.0
|
O9
|
A:V14302
|
4.4
|
14.9
|
0.5
|
C1
|
A:V14302
|
4.5
|
28.5
|
0.5
|
OH
|
A:TYR7
|
4.5
|
16.3
|
1.0
|
O9
|
A:V14302
|
4.6
|
24.3
|
0.5
|
CE1
|
A:HIS94
|
4.6
|
12.3
|
1.0
|
N
|
A:THR199
|
4.6
|
15.3
|
1.0
|
CB
|
A:THR199
|
4.7
|
17.2
|
1.0
|
ND1
|
A:HIS96
|
4.7
|
13.1
|
1.0
|
F20
|
A:V14302
|
4.7
|
20.6
|
0.5
|
O
|
A:HOH437
|
4.8
|
15.1
|
1.0
|
C6
|
A:V14302
|
4.8
|
28.5
|
0.5
|
CA
|
A:THR199
|
4.8
|
17.1
|
1.0
|
ND1
|
A:HIS200
|
4.8
|
28.1
|
1.0
|
O
|
A:THR199
|
4.8
|
17.3
|
1.0
|
S11
|
A:V14302
|
4.9
|
22.8
|
0.5
|
|
Fluorine binding site 4 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 4 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:24.3
occ:0.50
|
F12
|
A:V14302
|
0.0
|
24.3
|
0.5
|
C3
|
A:V14302
|
1.4
|
26.2
|
0.5
|
O8
|
A:V14302
|
2.3
|
15.0
|
0.5
|
C3
|
A:V14302
|
2.3
|
18.1
|
0.5
|
C2
|
A:V14302
|
2.3
|
25.0
|
0.5
|
F12
|
A:V14302
|
2.4
|
21.1
|
0.5
|
C4
|
A:V14302
|
2.4
|
24.3
|
0.5
|
C4
|
A:V14302
|
2.4
|
17.0
|
0.5
|
F13
|
A:V14302
|
2.6
|
26.9
|
0.5
|
S7
|
A:V14302
|
2.7
|
17.0
|
0.5
|
N
|
A:HIS200
|
2.8
|
16.7
|
1.0
|
S7
|
A:V14302
|
2.9
|
23.7
|
0.5
|
N
|
A:THR199
|
3.0
|
15.3
|
1.0
|
N10
|
A:V14302
|
3.1
|
17.0
|
0.5
|
N10
|
A:V14302
|
3.2
|
16.6
|
0.5
|
C2
|
A:V14302
|
3.2
|
19.3
|
0.5
|
CB
|
A:HIS200
|
3.2
|
21.4
|
1.0
|
O8
|
A:V14302
|
3.2
|
22.3
|
0.5
|
C5
|
A:V14302
|
3.4
|
19.3
|
0.5
|
C
|
A:THR199
|
3.5
|
17.9
|
1.0
|
CA
|
A:HIS200
|
3.5
|
20.6
|
1.0
|
OG1
|
A:THR199
|
3.6
|
15.6
|
1.0
|
CB
|
A:LEU198
|
3.6
|
14.6
|
1.0
|
C1
|
A:V14302
|
3.7
|
28.5
|
0.5
|
CA
|
A:THR199
|
3.7
|
17.1
|
1.0
|
C5
|
A:V14302
|
3.7
|
23.3
|
0.5
|
C
|
A:LEU198
|
3.7
|
15.4
|
1.0
|
O
|
A:HIS200
|
3.7
|
18.6
|
1.0
|
F13
|
A:V14302
|
3.8
|
21.4
|
0.5
|
CA
|
A:LEU198
|
3.9
|
15.4
|
1.0
|
C1
|
A:V14302
|
4.0
|
20.9
|
0.5
|
C
|
A:HIS200
|
4.1
|
18.9
|
1.0
|
C6
|
A:V14302
|
4.1
|
20.5
|
0.5
|
O9
|
A:V14302
|
4.1
|
14.9
|
0.5
|
F20
|
A:V14302
|
4.2
|
20.6
|
0.5
|
C6
|
A:V14302
|
4.2
|
28.5
|
0.5
|
CB
|
A:THR199
|
4.2
|
17.2
|
1.0
|
CD2
|
A:LEU198
|
4.4
|
16.6
|
1.0
|
O9
|
A:V14302
|
4.4
|
24.3
|
0.5
|
O
|
A:THR199
|
4.5
|
17.3
|
1.0
|
CG
|
A:LEU198
|
4.5
|
16.8
|
1.0
|
CG
|
A:HIS200
|
4.6
|
25.4
|
1.0
|
O
|
A:LEU198
|
4.7
|
14.4
|
1.0
|
F20
|
A:V14302
|
4.8
|
22.2
|
0.5
|
ZN
|
A:ZN301
|
4.9
|
12.4
|
1.0
|
|
Fluorine binding site 5 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 5 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:21.4
occ:0.50
|
F13
|
A:V14302
|
0.0
|
21.4
|
0.5
|
C2
|
A:V14302
|
1.4
|
19.3
|
0.5
|
C3
|
A:V14302
|
2.3
|
18.1
|
0.5
|
C1
|
A:V14302
|
2.4
|
20.9
|
0.5
|
F12
|
A:V14302
|
2.5
|
21.1
|
0.5
|
O17
|
A:V14302
|
2.9
|
24.0
|
0.5
|
S11
|
A:V14302
|
2.9
|
22.8
|
0.5
|
O
|
A:HOH489
|
3.1
|
24.0
|
1.0
|
C18
|
A:V14302
|
3.1
|
47.6
|
0.5
|
CB
|
A:HIS200
|
3.1
|
21.4
|
1.0
|
CG
|
A:HIS200
|
3.2
|
25.4
|
1.0
|
CE1
|
A:HIS64
|
3.3
|
21.1
|
1.0
|
C15
|
A:V14302
|
3.3
|
29.3
|
0.5
|
C2
|
A:V14302
|
3.4
|
25.0
|
0.5
|
F13
|
A:V14302
|
3.4
|
26.9
|
0.5
|
C4
|
A:V14302
|
3.6
|
17.0
|
0.5
|
ND1
|
A:HIS200
|
3.6
|
28.1
|
1.0
|
C3
|
A:V14302
|
3.6
|
26.2
|
0.5
|
C6
|
A:V14302
|
3.7
|
20.5
|
0.5
|
CD2
|
A:HIS200
|
3.7
|
26.0
|
1.0
|
O21
|
A:V14302
|
3.7
|
55.7
|
0.5
|
F12
|
A:V14302
|
3.8
|
24.3
|
0.5
|
O
|
A:HOH529
|
3.9
|
18.5
|
1.0
|
C1
|
A:V14302
|
4.0
|
28.5
|
0.5
|
C5
|
A:V14302
|
4.1
|
19.3
|
0.5
|
NE2
|
A:HIS64
|
4.2
|
20.4
|
1.0
|
ND1
|
A:HIS64
|
4.2
|
18.4
|
1.0
|
C15
|
A:V14302
|
4.3
|
39.8
|
0.5
|
CE1
|
A:HIS200
|
4.3
|
21.2
|
1.0
|
NE2
|
A:HIS200
|
4.4
|
25.9
|
1.0
|
C18
|
A:V14302
|
4.4
|
35.7
|
0.5
|
C4
|
A:V14302
|
4.4
|
24.3
|
0.5
|
O16
|
A:V14302
|
4.4
|
22.4
|
0.5
|
OH
|
A:TYR7
|
4.6
|
16.3
|
1.0
|
CA
|
A:HIS200
|
4.7
|
20.6
|
1.0
|
O21
|
A:V14302
|
4.7
|
45.5
|
0.5
|
S11
|
A:V14302
|
4.7
|
34.6
|
0.5
|
C6
|
A:V14302
|
4.7
|
28.5
|
0.5
|
NE2
|
A:HIS67
|
4.8
|
20.5
|
1.0
|
N10
|
A:V14302
|
4.8
|
17.0
|
0.5
|
N19
|
A:V14302
|
4.9
|
21.7
|
0.5
|
C5
|
A:V14302
|
4.9
|
23.3
|
0.5
|
O
|
A:HOH437
|
4.9
|
15.1
|
1.0
|
|
Fluorine binding site 6 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 6 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F302
b:26.9
occ:0.50
|
F13
|
A:V14302
|
0.0
|
26.9
|
0.5
|
C2
|
A:V14302
|
1.4
|
25.0
|
0.5
|
C3
|
A:V14302
|
2.3
|
26.2
|
0.5
|
C1
|
A:V14302
|
2.4
|
28.5
|
0.5
|
F12
|
A:V14302
|
2.6
|
24.3
|
0.5
|
C2
|
A:V14302
|
2.9
|
19.3
|
0.5
|
CB
|
A:HIS200
|
3.0
|
21.4
|
1.0
|
O
|
A:HIS200
|
3.0
|
18.6
|
1.0
|
O21
|
A:V14302
|
3.0
|
45.5
|
0.5
|
S11
|
A:V14302
|
3.0
|
34.6
|
0.5
|
C1
|
A:V14302
|
3.2
|
20.9
|
0.5
|
C3
|
A:V14302
|
3.2
|
18.1
|
0.5
|
O
|
A:PRO201
|
3.2
|
22.2
|
1.0
|
C15
|
A:V14302
|
3.2
|
39.8
|
0.5
|
C18
|
A:V14302
|
3.3
|
35.7
|
0.5
|
C
|
A:HIS200
|
3.3
|
18.9
|
1.0
|
F13
|
A:V14302
|
3.4
|
21.4
|
0.5
|
C18
|
A:V14302
|
3.4
|
47.6
|
0.5
|
CA
|
A:HIS200
|
3.5
|
20.6
|
1.0
|
O16
|
A:V14302
|
3.5
|
29.3
|
0.5
|
C6
|
A:V14302
|
3.6
|
20.5
|
0.5
|
C4
|
A:V14302
|
3.6
|
24.3
|
0.5
|
C15
|
A:V14302
|
3.6
|
29.3
|
0.5
|
C4
|
A:V14302
|
3.6
|
17.0
|
0.5
|
CG
|
A:HIS200
|
3.6
|
25.4
|
1.0
|
C6
|
A:V14302
|
3.7
|
28.5
|
0.5
|
C5
|
A:V14302
|
3.7
|
19.3
|
0.5
|
N
|
A:HIS200
|
3.7
|
16.7
|
1.0
|
CD2
|
A:HIS200
|
3.8
|
26.0
|
1.0
|
F12
|
A:V14302
|
3.8
|
21.1
|
0.5
|
C
|
A:PRO201
|
3.9
|
18.4
|
1.0
|
S11
|
A:V14302
|
4.0
|
22.8
|
0.5
|
C28
|
A:V14302
|
4.0
|
24.3
|
0.5
|
C5
|
A:V14302
|
4.1
|
23.3
|
0.5
|
N
|
A:PRO201
|
4.2
|
18.5
|
1.0
|
CB
|
A:LEU198
|
4.2
|
14.6
|
1.0
|
CD1
|
A:LEU198
|
4.4
|
18.4
|
1.0
|
N
|
A:PRO202
|
4.4
|
18.1
|
1.0
|
N19
|
A:V14302
|
4.4
|
21.7
|
0.5
|
CD
|
A:PRO202
|
4.4
|
19.7
|
1.0
|
O8
|
A:V14302
|
4.5
|
15.0
|
0.5
|
O17
|
A:V14302
|
4.5
|
32.5
|
0.5
|
CA
|
A:PRO201
|
4.7
|
19.8
|
1.0
|
F20
|
A:V14302
|
4.7
|
20.6
|
0.5
|
O21
|
A:V14302
|
4.7
|
55.7
|
0.5
|
CG
|
A:LEU198
|
4.7
|
16.8
|
1.0
|
S7
|
A:V14302
|
4.8
|
17.0
|
0.5
|
C14
|
A:V14302
|
4.9
|
24.9
|
0.5
|
O16
|
A:V14302
|
4.9
|
22.4
|
0.5
|
CD2
|
A:LEU198
|
4.9
|
16.6
|
1.0
|
ND1
|
A:HIS200
|
4.9
|
28.1
|
1.0
|
C
|
A:THR199
|
4.9
|
17.9
|
1.0
|
N19
|
A:V14302
|
5.0
|
26.5
|
0.5
|
|
Fluorine binding site 7 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 7 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F302
b:25.9
occ:1.00
|
F20
|
B:V14302
|
0.0
|
25.9
|
1.0
|
C5
|
B:V14302
|
1.3
|
23.5
|
1.0
|
C6
|
B:V14302
|
2.3
|
30.8
|
1.0
|
C4
|
B:V14302
|
2.4
|
21.4
|
1.0
|
O9
|
B:V14302
|
2.7
|
17.7
|
1.0
|
N19
|
B:V14302
|
2.8
|
33.0
|
1.0
|
S7
|
B:V14302
|
3.2
|
16.7
|
1.0
|
CE1
|
B:HIS94
|
3.3
|
10.7
|
1.0
|
C14
|
B:V14302
|
3.5
|
35.7
|
1.0
|
C1
|
B:V14302
|
3.6
|
32.5
|
1.0
|
C3
|
B:V14302
|
3.6
|
27.2
|
1.0
|
OE1
|
B:GLN92
|
3.6
|
15.7
|
1.0
|
C28
|
B:V14302
|
3.8
|
41.9
|
1.0
|
ND1
|
B:HIS94
|
4.0
|
11.9
|
1.0
|
C2
|
B:V14302
|
4.1
|
30.1
|
1.0
|
O8
|
B:V14302
|
4.2
|
16.9
|
1.0
|
N10
|
B:V14302
|
4.3
|
15.4
|
1.0
|
CB
|
B:ALA121
|
4.3
|
10.1
|
1.0
|
NE2
|
B:HIS94
|
4.3
|
10.5
|
1.0
|
CD2
|
B:LEU198
|
4.5
|
16.1
|
1.0
|
CD
|
B:GLN92
|
4.6
|
13.0
|
1.0
|
F12
|
B:V14302
|
4.8
|
21.9
|
1.0
|
CZ
|
B:PHE91
|
4.8
|
13.9
|
1.0
|
C22
|
B:V14302
|
4.9
|
37.5
|
1.0
|
ZN
|
B:ZN301
|
4.9
|
11.0
|
1.0
|
CE2
|
B:PHE91
|
5.0
|
13.4
|
1.0
|
|
Fluorine binding site 8 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 8 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F302
b:21.9
occ:1.00
|
F12
|
B:V14302
|
0.0
|
21.9
|
1.0
|
C3
|
B:V14302
|
1.3
|
27.2
|
1.0
|
C2
|
B:V14302
|
2.3
|
30.1
|
1.0
|
C4
|
B:V14302
|
2.4
|
21.4
|
1.0
|
F13
|
B:V14302
|
2.6
|
31.3
|
1.0
|
O8
|
B:V14302
|
2.8
|
16.9
|
1.0
|
N
|
B:THR199
|
2.9
|
11.4
|
1.0
|
CD2
|
B:HIS200
|
2.9
|
24.3
|
1.0
|
N
|
B:HIS200
|
2.9
|
15.8
|
1.0
|
S7
|
B:V14302
|
3.0
|
16.7
|
1.0
|
NE2
|
B:HIS200
|
3.0
|
32.1
|
1.0
|
N10
|
B:V14302
|
3.2
|
15.4
|
1.0
|
CG
|
B:HIS200
|
3.3
|
23.5
|
1.0
|
CE1
|
B:HIS200
|
3.4
|
23.5
|
1.0
|
CB
|
B:LEU198
|
3.5
|
13.2
|
1.0
|
ND1
|
B:HIS200
|
3.5
|
33.7
|
1.0
|
C1
|
B:V14302
|
3.6
|
32.5
|
1.0
|
C
|
B:LEU198
|
3.6
|
12.9
|
1.0
|
C
|
B:THR199
|
3.6
|
13.9
|
1.0
|
C5
|
B:V14302
|
3.6
|
23.5
|
1.0
|
O
|
B:HIS200
|
3.7
|
16.1
|
1.0
|
OG1
|
B:THR199
|
3.7
|
12.2
|
1.0
|
CA
|
B:THR199
|
3.7
|
12.8
|
1.0
|
CA
|
B:LEU198
|
3.7
|
12.0
|
1.0
|
CA
|
B:HIS200
|
3.8
|
16.9
|
1.0
|
C6
|
B:V14302
|
4.1
|
30.8
|
1.0
|
CB
|
B:HIS200
|
4.1
|
21.1
|
1.0
|
C
|
B:HIS200
|
4.1
|
15.0
|
1.0
|
CD2
|
B:LEU198
|
4.2
|
16.1
|
1.0
|
CG
|
B:LEU198
|
4.3
|
12.8
|
1.0
|
CB
|
B:THR199
|
4.3
|
12.0
|
1.0
|
O9
|
B:V14302
|
4.4
|
17.7
|
1.0
|
O
|
B:LEU198
|
4.6
|
13.3
|
1.0
|
O
|
B:THR199
|
4.7
|
15.5
|
1.0
|
F20
|
B:V14302
|
4.8
|
25.9
|
1.0
|
CD1
|
B:LEU198
|
4.8
|
16.1
|
1.0
|
ZN
|
B:ZN301
|
4.9
|
11.0
|
1.0
|
S11
|
B:V14302
|
5.0
|
34.0
|
1.0
|
|
Fluorine binding site 9 out
of 9 in 5e2m
Go back to
Fluorine Binding Sites List in 5e2m
Fluorine binding site 9 out
of 9 in the Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of Human Carbonic Anhydrase Isozyme I with 3- (Cyclooctylamino)-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F302
b:31.3
occ:1.00
|
F13
|
B:V14302
|
0.0
|
31.3
|
1.0
|
C2
|
B:V14302
|
1.4
|
30.1
|
1.0
|
C3
|
B:V14302
|
2.3
|
27.2
|
1.0
|
C1
|
B:V14302
|
2.4
|
32.5
|
1.0
|
F12
|
B:V14302
|
2.6
|
21.9
|
1.0
|
ND1
|
B:HIS200
|
2.8
|
33.7
|
1.0
|
S11
|
B:V14302
|
2.9
|
34.0
|
1.0
|
C15
|
B:V14302
|
3.0
|
35.1
|
1.0
|
O
|
B:HIS200
|
3.1
|
16.1
|
1.0
|
CE1
|
B:HIS200
|
3.1
|
23.5
|
1.0
|
O
|
B:PRO201
|
3.2
|
18.9
|
1.0
|
O16
|
B:V14302
|
3.3
|
36.9
|
1.0
|
CG
|
B:HIS200
|
3.4
|
23.5
|
1.0
|
C4
|
B:V14302
|
3.6
|
21.4
|
1.0
|
C
|
B:HIS200
|
3.6
|
15.0
|
1.0
|
C6
|
B:V14302
|
3.6
|
30.8
|
1.0
|
C18
|
B:V14302
|
3.7
|
28.4
|
1.0
|
NE2
|
B:HIS200
|
3.8
|
32.1
|
1.0
|
C
|
B:PRO201
|
3.8
|
17.0
|
1.0
|
CD2
|
B:HIS200
|
4.0
|
24.3
|
1.0
|
N
|
B:HIS200
|
4.0
|
15.8
|
1.0
|
C5
|
B:V14302
|
4.1
|
23.5
|
1.0
|
CA
|
B:HIS200
|
4.1
|
16.9
|
1.0
|
CD
|
B:PRO202
|
4.1
|
17.6
|
1.0
|
CB
|
B:HIS200
|
4.1
|
21.1
|
1.0
|
CB
|
B:LEU198
|
4.2
|
13.2
|
1.0
|
CD1
|
B:LEU198
|
4.2
|
16.1
|
1.0
|
N
|
B:PRO202
|
4.3
|
17.2
|
1.0
|
O17
|
B:V14302
|
4.3
|
34.4
|
1.0
|
N
|
B:PRO201
|
4.4
|
16.2
|
1.0
|
CG
|
B:LEU198
|
4.6
|
12.8
|
1.0
|
CD2
|
B:LEU198
|
4.8
|
16.1
|
1.0
|
CA
|
B:PRO201
|
4.8
|
16.9
|
1.0
|
N19
|
B:V14302
|
4.8
|
33.0
|
1.0
|
O21
|
B:V14302
|
4.9
|
45.2
|
1.0
|
|
Reference:
A.Zubriene,
A.Smirnov,
V.Dudutiene,
D.D.Timm,
J.Matuliene,
V.Michailoviene,
A.Zaksauskas,
E.Manakova,
S.Grazulis,
D.Matulis.
Intrinsic Thermodynamics and Structures of 2,4- and 3,4-Substituted Fluorinated Benzenesulfonamides Binding to Carbonic Anhydrases. Chemmedchem V. 12 161 2017.
ISSN: ESSN 1860-7187
PubMed: 28001003
DOI: 10.1002/CMDC.201600509
Page generated: Thu Aug 1 08:59:03 2024
|