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Fluorine in PDB 5esf: Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole

Enzymatic activity of Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole

All present enzymatic activity of Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole:
1.14.13.70;

Protein crystallography data

The structure of Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole, PDB code: 5esf was solved by A.Sagatova, M.V.Keniya, R.K.Wilson, M.Sabherwal, J.D.A.Tyndall, B.C.Monk, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.72 / 2.25
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 78.490, 66.930, 81.060, 90.00, 99.39, 90.00
R / Rfree (%) 20.9 / 25.2

Other elements in 5esf:

The structure of Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole also contains other interesting chemical elements:

Iron (Fe) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole (pdb code 5esf). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole, PDB code: 5esf:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 5esf

Go back to Fluorine Binding Sites List in 5esf
Fluorine binding site 1 out of 2 in the Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:34.6
occ:1.00
F1 A:TPF602 0.0 34.6 1.0
C11 A:TPF602 1.4 38.8 1.0
C12 A:TPF602 2.3 36.2 1.0
C10 A:TPF602 2.3 39.9 1.0
O A:GLY310 3.5 39.7 1.0
C13 A:TPF602 3.6 35.5 1.0
C9 A:TPF602 3.6 37.4 1.0
C A:GLY310 3.6 41.6 1.0
N A:VAL311 3.9 38.1 1.0
CD1 A:ILE139 3.9 42.4 1.0
CA A:VAL311 4.0 42.1 1.0
C8 A:TPF602 4.1 36.1 1.0
CMD A:HEM601 4.1 26.5 1.0
CG2 A:ILE139 4.2 36.4 1.0
CA A:GLY310 4.3 39.6 1.0
CG2 A:VAL311 4.3 37.1 1.0
CG1 A:ILE139 4.4 40.4 1.0
C2D A:HEM601 4.4 39.4 1.0
CE2 A:PHE134 4.6 44.5 1.0
F2 A:TPF602 4.7 37.7 1.0
C1D A:HEM601 4.8 31.7 1.0
CB A:VAL311 4.8 42.3 1.0
CHD A:HEM601 5.0 35.3 1.0
CB A:ILE139 5.0 40.3 1.0

Fluorine binding site 2 out of 2 in 5esf

Go back to Fluorine Binding Sites List in 5esf
Fluorine binding site 2 out of 2 in the Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Saccharomyces Cerevisiae CYP51 (Lanosterol 14-Alpha Demethylase) G73E Mutant Complexed with Fluconazole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F602

b:37.7
occ:1.00
F2 A:TPF602 0.0 37.7 1.0
C13 A:TPF602 1.4 35.5 1.0
C12 A:TPF602 2.3 36.2 1.0
C8 A:TPF602 2.4 36.1 1.0
C1 A:TPF602 2.9 36.0 1.0
C5 A:TPF602 3.0 36.8 1.0
C2 A:TPF602 3.0 36.6 1.0
CZ A:PHE236 3.4 50.9 1.0
C11 A:TPF602 3.6 38.8 1.0
C9 A:TPF602 3.6 37.4 1.0
N6 A:TPF602 3.7 33.2 1.0
N4 A:TPF602 3.7 35.2 1.0
CA A:GLY314 3.7 40.5 1.0
CZ A:PHE134 3.8 42.1 1.0
CE1 A:PHE236 4.0 49.2 1.0
C10 A:TPF602 4.1 39.9 1.0
N1 A:TPF602 4.2 34.1 1.0
CE2 A:PHE236 4.2 53.3 1.0
O A:TPF602 4.3 36.8 1.0
CE2 A:PHE134 4.3 44.5 1.0
N3 A:TPF602 4.4 40.1 1.0
N A:GLY314 4.4 36.7 1.0
F1 A:TPF602 4.7 34.6 1.0
O A:GLY310 4.7 39.7 1.0
CE1 A:PHE134 4.9 44.3 1.0
C7 A:TPF602 4.9 31.1 1.0
C6 A:TPF602 4.9 37.1 1.0
C A:GLY314 5.0 39.0 1.0

Reference:

A.Sagatova, M.V.Keniya, R.K.Wilson, M.Sabherwal, J.D.A.Tyndall, B.C.Monk. Structures of Lanosterol 14-Alpha Demethylase Mutants. To Be Published.
Page generated: Thu Aug 1 09:14:20 2024

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