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Atomistry » Fluorine » PDB 5ihc-5j8m » 5ivf | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Fluorine » PDB 5ihc-5j8m » 5ivf » |
Fluorine in PDB 5ivf: Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-OlProtein crystallography data
The structure of Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol, PDB code: 5ivf
was solved by
J.R.Horton,
X.Cheng,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 5ivf:
The structure of Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol
(pdb code 5ivf). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol, PDB code: 5ivf: Jump to Fluorine binding site number: 1; 2; 3; Fluorine binding site 1 out of 3 in 5ivfGo back to![]() ![]()
Fluorine binding site 1 out
of 3 in the Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol
![]() Mono view ![]() Stereo pair view
Fluorine binding site 2 out of 3 in 5ivfGo back to![]() ![]()
Fluorine binding site 2 out
of 3 in the Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol
![]() Mono view ![]() Stereo pair view
Fluorine binding site 3 out of 3 in 5ivfGo back to![]() ![]()
Fluorine binding site 3 out
of 3 in the Linked KDM5A Jmj Domain Bound to the Inhibitor N10 8-(1-Methyl-1H- Imidazol-4-Yl)-2-(4,4,4-Trifluorobutoxy)Pyrido[3,4-D]Pyrimidin-4-Ol
![]() Mono view ![]() Stereo pair view
Reference:
J.R.Horton,
X.Liu,
M.Gale,
L.Wu,
J.R.Shanks,
X.Zhang,
P.J.Webber,
J.S.Bell,
S.C.Kales,
B.T.Mott,
G.Rai,
D.J.Jansen,
M.J.Henderson,
D.J.Urban,
M.D.Hall,
A.Simeonov,
D.J.Maloney,
M.A.Johns,
H.Fu,
A.Jadhav,
P.M.Vertino,
Q.Yan,
X.Cheng.
Structural Basis For KDM5A Histone Lysine Demethylase Inhibition By Diverse Compounds. Cell Chem Biol V. 23 769 2016.
Page generated: Tue Jul 15 04:12:49 2025
ISSN: ESSN 2451-9456 PubMed: 27427228 DOI: 10.1016/J.CHEMBIOL.2016.06.006 |
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