Fluorine in PDB 5llo: Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Enzymatic activity of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
All present enzymatic activity of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide:
4.2.1.1;
Protein crystallography data
The structure of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide, PDB code: 5llo
was solved by
A.Smirnov,
E.Manakova,
S.Grazulis,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
73.10 /
1.60
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
77.291,
74.111,
91.585,
90.00,
108.95,
90.00
|
R / Rfree (%)
|
18.5 /
22.5
|
Other elements in 5llo:
The structure of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Fluorine atom in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
(pdb code 5llo). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 12 binding sites of Fluorine where determined in the
Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide, PDB code: 5llo:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 1 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F303
b:16.7
occ:1.00
|
F11
|
A:5EF303
|
0.0
|
16.7
|
1.0
|
C6
|
A:5EF303
|
1.4
|
15.9
|
1.0
|
C7
|
A:5EF303
|
2.3
|
17.2
|
1.0
|
C5
|
A:5EF303
|
2.4
|
15.3
|
1.0
|
F12
|
A:5EF303
|
2.7
|
18.8
|
1.0
|
N4
|
A:5EF303
|
2.7
|
13.7
|
1.0
|
ZN
|
A:ZN301
|
2.9
|
10.1
|
1.0
|
CE1
|
A:HIS93
|
3.1
|
9.7
|
1.0
|
S1
|
A:5EF303
|
3.1
|
13.9
|
1.0
|
NE2
|
A:HIS91
|
3.2
|
9.2
|
1.0
|
CG2
|
A:THR199
|
3.2
|
12.5
|
1.0
|
NE2
|
A:HIS93
|
3.3
|
10.3
|
1.0
|
CD2
|
A:HIS91
|
3.6
|
9.1
|
1.0
|
C8
|
A:5EF303
|
3.6
|
22.2
|
1.0
|
C10
|
A:5EF303
|
3.7
|
17.8
|
1.0
|
CE1
|
A:HIS91
|
3.9
|
8.7
|
1.0
|
OG1
|
A:THR198
|
4.0
|
13.1
|
1.0
|
OG1
|
A:THR199
|
4.1
|
13.1
|
1.0
|
C9
|
A:5EF303
|
4.1
|
20.9
|
1.0
|
O3
|
A:5EF303
|
4.2
|
12.5
|
1.0
|
O2
|
A:5EF303
|
4.2
|
16.4
|
1.0
|
CB
|
A:THR199
|
4.3
|
12.0
|
1.0
|
ND1
|
A:HIS93
|
4.4
|
9.6
|
1.0
|
CG
|
A:HIS91
|
4.5
|
9.8
|
1.0
|
ND1
|
A:HIS91
|
4.6
|
9.7
|
1.0
|
CD2
|
A:HIS93
|
4.6
|
9.5
|
1.0
|
O
|
A:HOH439
|
4.6
|
13.8
|
1.0
|
F13
|
A:5EF303
|
4.7
|
18.9
|
1.0
|
OH
|
A:TYR6
|
4.7
|
15.2
|
1.0
|
ND1
|
A:HIS117
|
4.9
|
9.1
|
1.0
|
N
|
A:THR199
|
4.9
|
10.8
|
1.0
|
|
Fluorine binding site 2 out
of 12 in 5llo
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Fluorine Binding Sites List in 5llo
Fluorine binding site 2 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F303
b:18.8
occ:1.00
|
F12
|
A:5EF303
|
0.0
|
18.8
|
1.0
|
C7
|
A:5EF303
|
1.3
|
17.2
|
1.0
|
C8
|
A:5EF303
|
2.4
|
22.2
|
1.0
|
C6
|
A:5EF303
|
2.4
|
15.9
|
1.0
|
F11
|
A:5EF303
|
2.7
|
16.7
|
1.0
|
O15
|
A:5EF303
|
2.9
|
30.5
|
1.0
|
S14
|
A:5EF303
|
2.9
|
28.9
|
1.0
|
C17
|
A:5EF303
|
3.4
|
34.8
|
1.0
|
CG2
|
A:THR199
|
3.6
|
12.5
|
1.0
|
C9
|
A:5EF303
|
3.6
|
20.9
|
1.0
|
OG
|
A:SER67
|
3.7
|
19.4
|
0.5
|
C5
|
A:5EF303
|
3.7
|
15.3
|
1.0
|
C10
|
A:5EF303
|
4.1
|
17.8
|
1.0
|
OG1
|
A:THR199
|
4.1
|
13.1
|
1.0
|
CB
|
A:SER67
|
4.3
|
22.0
|
0.5
|
O19
|
A:5EF303
|
4.3
|
40.4
|
1.0
|
CB
|
A:THR199
|
4.4
|
12.0
|
1.0
|
CD2
|
A:HIS91
|
4.4
|
9.1
|
1.0
|
O16
|
A:5EF303
|
4.4
|
26.9
|
1.0
|
CB
|
A:SER67
|
4.5
|
21.6
|
0.5
|
C18
|
A:5EF303
|
4.5
|
38.8
|
1.0
|
NE2
|
A:HIS91
|
4.6
|
9.2
|
1.0
|
CG
|
A:HIS91
|
4.6
|
9.8
|
1.0
|
CE1
|
A:HIS91
|
4.8
|
8.7
|
1.0
|
ND1
|
A:HIS91
|
4.9
|
9.7
|
1.0
|
N20
|
A:5EF303
|
4.9
|
24.3
|
1.0
|
CE1
|
A:HIS93
|
4.9
|
9.7
|
1.0
|
CB
|
A:HIS66
|
4.9
|
23.1
|
1.0
|
|
Fluorine binding site 3 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 3 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F303
b:18.9
occ:1.00
|
F13
|
A:5EF303
|
0.0
|
18.9
|
1.0
|
C10
|
A:5EF303
|
1.3
|
17.8
|
1.0
|
C5
|
A:5EF303
|
2.3
|
15.3
|
1.0
|
C9
|
A:5EF303
|
2.3
|
20.9
|
1.0
|
N20
|
A:5EF303
|
2.7
|
24.3
|
1.0
|
C21
|
A:5EF303
|
2.8
|
25.9
|
1.0
|
S1
|
A:5EF303
|
2.9
|
13.9
|
1.0
|
O3
|
A:5EF303
|
3.1
|
12.5
|
1.0
|
O2
|
A:5EF303
|
3.1
|
16.4
|
1.0
|
CD2
|
A:LEU197
|
3.1
|
12.1
|
1.0
|
C6
|
A:5EF303
|
3.5
|
15.9
|
1.0
|
C8
|
A:5EF303
|
3.6
|
22.2
|
1.0
|
C22
|
A:5EF303
|
3.8
|
28.1
|
1.0
|
C25
|
A:5EF303
|
4.0
|
27.0
|
1.0
|
CG2
|
A:VAL119
|
4.0
|
9.6
|
1.0
|
C7
|
A:5EF303
|
4.1
|
17.2
|
1.0
|
C26
|
A:5EF303
|
4.3
|
27.1
|
1.0
|
CG
|
A:LEU197
|
4.3
|
11.7
|
1.0
|
CG1
|
A:VAL119
|
4.4
|
12.8
|
1.0
|
CE1
|
A:HIS91
|
4.5
|
8.7
|
1.0
|
N4
|
A:5EF303
|
4.5
|
13.7
|
1.0
|
CD1
|
A:LEU197
|
4.7
|
11.2
|
1.0
|
F11
|
A:5EF303
|
4.7
|
16.7
|
1.0
|
CB
|
A:LEU197
|
4.8
|
10.9
|
1.0
|
OG1
|
A:THR199
|
4.8
|
13.1
|
1.0
|
CB
|
A:VAL119
|
4.9
|
10.8
|
1.0
|
C23
|
A:5EF303
|
4.9
|
26.6
|
1.0
|
|
Fluorine binding site 4 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 4 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F303
b:17.9
occ:1.00
|
F11
|
B:5EF303
|
0.0
|
17.9
|
1.0
|
C6
|
B:5EF303
|
1.4
|
14.5
|
1.0
|
C7
|
B:5EF303
|
2.3
|
16.2
|
1.0
|
C5
|
B:5EF303
|
2.4
|
15.3
|
1.0
|
F12
|
B:5EF303
|
2.5
|
18.2
|
1.0
|
N4
|
B:5EF303
|
2.7
|
12.7
|
1.0
|
ZN
|
B:ZN301
|
3.0
|
9.4
|
1.0
|
CE1
|
B:HIS93
|
3.1
|
8.5
|
1.0
|
S1
|
B:5EF303
|
3.2
|
13.3
|
1.0
|
NE2
|
B:HIS91
|
3.2
|
8.5
|
1.0
|
CG2
|
B:THR199
|
3.2
|
11.5
|
1.0
|
NE2
|
B:HIS93
|
3.3
|
7.2
|
1.0
|
C8
|
B:5EF303
|
3.6
|
20.3
|
1.0
|
CD2
|
B:HIS91
|
3.6
|
7.4
|
1.0
|
C10
|
B:5EF303
|
3.7
|
17.3
|
1.0
|
CE1
|
B:HIS91
|
4.0
|
7.7
|
1.0
|
OG1
|
B:THR198
|
4.0
|
9.3
|
1.0
|
C9
|
B:5EF303
|
4.1
|
19.6
|
1.0
|
OG1
|
B:THR199
|
4.1
|
13.1
|
1.0
|
O2
|
B:5EF303
|
4.2
|
14.7
|
1.0
|
O3
|
B:5EF303
|
4.2
|
12.2
|
1.0
|
O
|
B:HOH407
|
4.2
|
20.2
|
1.0
|
CB
|
B:THR199
|
4.3
|
11.8
|
1.0
|
ND1
|
B:HIS93
|
4.4
|
7.2
|
1.0
|
O
|
B:HOH445
|
4.4
|
18.2
|
1.0
|
CG
|
B:HIS91
|
4.6
|
7.0
|
1.0
|
O
|
B:HOH410
|
4.7
|
11.2
|
1.0
|
CD2
|
B:HIS93
|
4.7
|
6.3
|
1.0
|
ND1
|
B:HIS91
|
4.7
|
8.2
|
1.0
|
OH
|
B:TYR6
|
4.8
|
11.3
|
1.0
|
F13
|
B:5EF303
|
4.8
|
19.4
|
1.0
|
O
|
B:HOH402
|
4.8
|
22.5
|
1.0
|
N
|
B:THR199
|
4.9
|
10.7
|
1.0
|
OG
|
B:SER67
|
5.0
|
18.3
|
1.0
|
|
Fluorine binding site 5 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 5 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F303
b:18.2
occ:1.00
|
F12
|
B:5EF303
|
0.0
|
18.2
|
1.0
|
C7
|
B:5EF303
|
1.4
|
16.2
|
1.0
|
C6
|
B:5EF303
|
2.4
|
14.5
|
1.0
|
C8
|
B:5EF303
|
2.4
|
20.3
|
1.0
|
F11
|
B:5EF303
|
2.5
|
17.9
|
1.0
|
S14
|
B:5EF303
|
3.0
|
28.6
|
1.0
|
O15
|
B:5EF303
|
3.1
|
35.4
|
1.0
|
C17
|
B:5EF303
|
3.2
|
30.5
|
1.0
|
O
|
B:HOH402
|
3.4
|
22.5
|
1.0
|
CB
|
B:SER67
|
3.5
|
16.9
|
1.0
|
CG2
|
B:THR199
|
3.6
|
11.5
|
1.0
|
C5
|
B:5EF303
|
3.6
|
15.3
|
1.0
|
C9
|
B:5EF303
|
3.6
|
19.6
|
1.0
|
OG
|
B:SER67
|
3.7
|
18.3
|
1.0
|
O
|
B:HOH445
|
3.9
|
18.2
|
1.0
|
OG1
|
B:THR199
|
4.0
|
13.1
|
1.0
|
O
|
B:HOH407
|
4.1
|
20.2
|
1.0
|
C10
|
B:5EF303
|
4.1
|
17.3
|
1.0
|
CB
|
B:THR199
|
4.3
|
11.8
|
1.0
|
O16
|
B:5EF303
|
4.5
|
34.6
|
1.0
|
C18
|
B:5EF303
|
4.5
|
37.6
|
1.0
|
CD2
|
B:HIS91
|
4.5
|
7.4
|
1.0
|
NE2
|
B:HIS91
|
4.7
|
8.5
|
1.0
|
N20
|
B:5EF303
|
4.8
|
23.0
|
1.0
|
CA
|
B:SER67
|
4.8
|
17.5
|
1.0
|
CE1
|
B:HIS93
|
4.9
|
8.5
|
1.0
|
CG
|
B:HIS91
|
4.9
|
7.0
|
1.0
|
CE1
|
B:HIS91
|
5.0
|
7.7
|
1.0
|
|
Fluorine binding site 6 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 6 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F303
b:19.4
occ:1.00
|
F13
|
B:5EF303
|
0.0
|
19.4
|
1.0
|
C10
|
B:5EF303
|
1.3
|
17.3
|
1.0
|
C5
|
B:5EF303
|
2.4
|
15.3
|
1.0
|
C9
|
B:5EF303
|
2.4
|
19.6
|
1.0
|
N20
|
B:5EF303
|
2.8
|
23.0
|
1.0
|
S1
|
B:5EF303
|
2.9
|
13.3
|
1.0
|
C21
|
B:5EF303
|
2.9
|
24.2
|
1.0
|
O3
|
B:5EF303
|
3.0
|
12.2
|
1.0
|
O2
|
B:5EF303
|
3.0
|
14.7
|
1.0
|
CD2
|
B:LEU197
|
3.2
|
14.4
|
1.0
|
C22
|
B:5EF303
|
3.5
|
27.7
|
1.0
|
C6
|
B:5EF303
|
3.6
|
14.5
|
1.0
|
C26
|
B:5EF303
|
3.6
|
28.8
|
1.0
|
C8
|
B:5EF303
|
3.6
|
20.3
|
1.0
|
C7
|
B:5EF303
|
4.1
|
16.2
|
1.0
|
CG2
|
B:VAL119
|
4.2
|
8.9
|
1.0
|
CG
|
B:LEU197
|
4.4
|
12.4
|
1.0
|
C25
|
B:5EF303
|
4.4
|
25.4
|
1.0
|
CE1
|
B:HIS91
|
4.5
|
7.7
|
1.0
|
N4
|
B:5EF303
|
4.5
|
12.7
|
1.0
|
CG1
|
B:VAL119
|
4.6
|
11.3
|
1.0
|
CB
|
B:LEU197
|
4.7
|
9.6
|
1.0
|
C23
|
B:5EF303
|
4.8
|
25.2
|
1.0
|
F11
|
B:5EF303
|
4.8
|
17.9
|
1.0
|
CD1
|
B:LEU197
|
4.8
|
14.3
|
1.0
|
C27
|
B:5EF303
|
4.9
|
34.7
|
1.0
|
OG1
|
B:THR199
|
4.9
|
13.1
|
1.0
|
|
Fluorine binding site 7 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 7 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F302
b:17.1
occ:1.00
|
F11
|
C:5EF302
|
0.0
|
17.1
|
1.0
|
C6
|
C:5EF302
|
1.4
|
18.2
|
1.0
|
C7
|
C:5EF302
|
2.3
|
18.3
|
1.0
|
C5
|
C:5EF302
|
2.4
|
18.2
|
1.0
|
F12
|
C:5EF302
|
2.7
|
22.0
|
1.0
|
N4
|
C:5EF302
|
2.8
|
17.8
|
1.0
|
ZN
|
C:ZN301
|
2.9
|
14.0
|
1.0
|
NE2
|
C:HIS91
|
3.1
|
11.9
|
1.0
|
CE1
|
C:HIS93
|
3.1
|
11.0
|
1.0
|
CG2
|
C:THR199
|
3.1
|
15.8
|
1.0
|
S1
|
C:5EF302
|
3.2
|
17.2
|
1.0
|
NE2
|
C:HIS93
|
3.3
|
11.3
|
1.0
|
C8
|
C:5EF302
|
3.6
|
22.3
|
1.0
|
CD2
|
C:HIS91
|
3.6
|
14.3
|
1.0
|
C10
|
C:5EF302
|
3.7
|
18.9
|
1.0
|
OG1
|
C:THR199
|
3.7
|
14.4
|
1.0
|
CE1
|
C:HIS91
|
3.8
|
13.7
|
1.0
|
OG1
|
C:THR198
|
3.9
|
11.8
|
1.0
|
CB
|
C:THR199
|
4.1
|
16.1
|
1.0
|
O2
|
C:5EF302
|
4.1
|
18.9
|
1.0
|
C9
|
C:5EF302
|
4.2
|
21.9
|
1.0
|
O3
|
C:5EF302
|
4.2
|
16.2
|
1.0
|
ND1
|
C:HIS93
|
4.5
|
12.5
|
1.0
|
CG
|
C:HIS91
|
4.5
|
16.1
|
1.0
|
ND1
|
C:HIS91
|
4.5
|
15.4
|
1.0
|
O
|
C:HOH414
|
4.5
|
18.4
|
1.0
|
N
|
C:THR199
|
4.6
|
12.2
|
1.0
|
CD2
|
C:HIS93
|
4.7
|
11.7
|
1.0
|
OH
|
C:TYR6
|
4.7
|
21.1
|
1.0
|
F13
|
C:5EF302
|
4.8
|
19.5
|
1.0
|
ND1
|
C:HIS117
|
4.9
|
13.1
|
1.0
|
S14
|
C:5EF302
|
4.9
|
25.2
|
1.0
|
OE1
|
C:GLU104
|
5.0
|
12.8
|
1.0
|
|
Fluorine binding site 8 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 8 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F302
b:22.0
occ:1.00
|
F12
|
C:5EF302
|
0.0
|
22.0
|
1.0
|
C7
|
C:5EF302
|
1.4
|
18.3
|
1.0
|
C8
|
C:5EF302
|
2.4
|
22.3
|
1.0
|
C6
|
C:5EF302
|
2.4
|
18.2
|
1.0
|
F11
|
C:5EF302
|
2.7
|
17.1
|
1.0
|
S14
|
C:5EF302
|
2.7
|
25.2
|
1.0
|
O15
|
C:5EF302
|
2.8
|
28.0
|
1.0
|
C17
|
C:5EF302
|
3.2
|
27.2
|
1.0
|
CG2
|
C:THR199
|
3.5
|
15.8
|
1.0
|
C5
|
C:5EF302
|
3.7
|
18.2
|
1.0
|
C9
|
C:5EF302
|
3.7
|
21.9
|
1.0
|
OG1
|
C:THR199
|
3.9
|
14.4
|
1.0
|
C18
|
C:5EF302
|
4.0
|
29.1
|
1.0
|
C10
|
C:5EF302
|
4.1
|
18.9
|
1.0
|
CB
|
C:THR199
|
4.2
|
16.1
|
1.0
|
O16
|
C:5EF302
|
4.3
|
24.1
|
1.0
|
NE2
|
C:HIS91
|
4.4
|
11.9
|
1.0
|
CD2
|
C:HIS91
|
4.4
|
14.3
|
1.0
|
CB
|
C:SER67
|
4.5
|
25.6
|
1.0
|
CE1
|
C:HIS91
|
4.5
|
13.7
|
1.0
|
CG
|
C:HIS91
|
4.6
|
16.1
|
1.0
|
ND1
|
C:HIS91
|
4.6
|
15.4
|
1.0
|
CH2
|
C:TRP4
|
4.8
|
16.6
|
1.0
|
N20
|
C:5EF302
|
4.9
|
22.2
|
1.0
|
CE1
|
C:HIS93
|
4.9
|
11.0
|
1.0
|
|
Fluorine binding site 9 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 9 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F302
b:19.5
occ:1.00
|
F13
|
C:5EF302
|
0.0
|
19.5
|
1.0
|
C10
|
C:5EF302
|
1.3
|
18.9
|
1.0
|
C5
|
C:5EF302
|
2.3
|
18.2
|
1.0
|
C9
|
C:5EF302
|
2.3
|
21.9
|
1.0
|
N20
|
C:5EF302
|
2.7
|
22.2
|
1.0
|
C21
|
C:5EF302
|
2.9
|
22.1
|
1.0
|
S1
|
C:5EF302
|
2.9
|
17.2
|
1.0
|
O3
|
C:5EF302
|
3.0
|
16.2
|
1.0
|
CD2
|
C:LEU197
|
3.0
|
14.0
|
1.0
|
O2
|
C:5EF302
|
3.3
|
18.9
|
1.0
|
C6
|
C:5EF302
|
3.6
|
18.2
|
1.0
|
C8
|
C:5EF302
|
3.6
|
22.3
|
1.0
|
CG2
|
C:VAL119
|
3.7
|
14.9
|
1.0
|
C25
|
C:5EF302
|
4.0
|
25.6
|
1.0
|
CG1
|
C:VAL119
|
4.0
|
15.6
|
1.0
|
C22
|
C:5EF302
|
4.0
|
22.7
|
1.0
|
C7
|
C:5EF302
|
4.1
|
18.3
|
1.0
|
CE1
|
C:HIS91
|
4.2
|
13.7
|
1.0
|
CG
|
C:LEU197
|
4.4
|
13.0
|
1.0
|
CB
|
C:VAL119
|
4.4
|
14.4
|
1.0
|
C26
|
C:5EF302
|
4.5
|
25.1
|
1.0
|
N4
|
C:5EF302
|
4.6
|
17.8
|
1.0
|
F11
|
C:5EF302
|
4.8
|
17.1
|
1.0
|
OG1
|
C:THR199
|
4.8
|
14.4
|
1.0
|
CD1
|
C:LEU197
|
4.9
|
13.2
|
1.0
|
NE2
|
C:HIS91
|
4.9
|
11.9
|
1.0
|
|
Fluorine binding site 10 out
of 12 in 5llo
Go back to
Fluorine Binding Sites List in 5llo
Fluorine binding site 10 out
of 12 in the Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Crystal Structure of Human Carbonic Anhydrase Isozyme XII with 3- [(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hy- Droxyethyl)Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F303
b:16.4
occ:1.00
|
F11
|
D:5EF303
|
0.0
|
16.4
|
1.0
|
C6
|
D:5EF303
|
1.4
|
15.0
|
1.0
|
C7
|
D:5EF303
|
2.3
|
20.3
|
1.0
|
C5
|
D:5EF303
|
2.4
|
14.4
|
1.0
|
F12
|
D:5EF303
|
2.6
|
20.8
|
1.0
|
N4
|
D:5EF303
|
2.8
|
13.2
|
1.0
|
ZN
|
D:ZN301
|
3.0
|
10.4
|
1.0
|
CE1
|
D:HIS93
|
3.2
|
9.9
|
1.0
|
S1
|
D:5EF303
|
3.2
|
13.9
|
1.0
|
CG2
|
D:THR199
|
3.3
|
11.4
|
1.0
|
NE2
|
D:HIS91
|
3.3
|
10.5
|
1.0
|
NE2
|
D:HIS93
|
3.4
|
9.2
|
1.0
|
C8
|
D:5EF303
|
3.6
|
21.9
|
1.0
|
C10
|
D:5EF303
|
3.7
|
17.7
|
1.0
|
CD2
|
D:HIS91
|
3.9
|
8.2
|
1.0
|
OG1
|
D:THR198
|
3.9
|
9.8
|
1.0
|
OG1
|
D:THR199
|
3.9
|
12.0
|
1.0
|
CE1
|
D:HIS91
|
4.0
|
10.2
|
1.0
|
O2
|
D:5EF303
|
4.1
|
14.6
|
1.0
|
C9
|
D:5EF303
|
4.1
|
20.5
|
1.0
|
CB
|
D:THR199
|
4.2
|
11.9
|
1.0
|
O3
|
D:5EF303
|
4.3
|
14.3
|
1.0
|
O
|
D:HOH401
|
4.3
|
23.2
|
1.0
|
ND1
|
D:HIS93
|
4.5
|
10.9
|
1.0
|
O
|
D:HOH462
|
4.5
|
17.9
|
1.0
|
O
|
D:HOH424
|
4.6
|
11.8
|
1.0
|
N
|
D:THR199
|
4.7
|
9.5
|
1.0
|
CG
|
D:HIS91
|
4.7
|
9.7
|
1.0
|
ND1
|
D:HIS91
|
4.7
|
10.0
|
1.0
|
CD2
|
D:HIS93
|
4.8
|
10.0
|
1.0
|
F13
|
D:5EF303
|
4.8
|
17.1
|
1.0
|
OH
|
D:TYR6
|
4.8
|
12.2
|
1.0
|
S14
|
D:5EF303
|
4.9
|
29.2
|
1.0
|
OE1
|
D:GLU104
|
5.0
|
10.5
|
1.0
|
|
Reference:
A.Smirnov,
A.Zubriene,
E.Manakova,
S.Grazulis,
D.Matulis.
Crystal Structure Correlations with the Intrinsic Thermodynamics of Human Carbonic Anhydrase Inhibitor Binding. Peerj V. 6 E4412 2018.
ISSN: ESSN 2167-8359
PubMed: 29503769
DOI: 10.7717/PEERJ.4412
Page generated: Thu Aug 1 11:23:47 2024
|