Atomistry » Fluorine » PDB 5nk2-5o6h » 5o5u
Atomistry »
  Fluorine »
    PDB 5nk2-5o6h »
      5o5u »

Fluorine in PDB 5o5u: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027, PDB code: 5o5u was solved by Z.Novakova, C.Barinka, L.Motlova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.57 / 1.53
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.790, 130.412, 159.097, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 17.1

Other elements in 5o5u:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Calcium (Ca) 1 atom
Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027 (pdb code 5o5u). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027, PDB code: 5o5u:

Fluorine binding site 1 out of 1 in 5o5u

Go back to Fluorine Binding Sites List in 5o5u
Fluorine binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F824

b:0.1
occ:1.00
FAS A:9LZ824 0.0 0.1 1.0
CCI A:9LZ824 1.3 0.9 1.0
NBR A:9LZ824 2.4 0.0 1.0
CAV A:9LZ824 2.4 0.6 1.0
CBF A:9LZ824 3.6 0.7 1.0
CAY A:9LZ824 3.6 0.5 1.0
CCM A:9LZ824 4.1 0.5 1.0
O A:PRO504 4.5 62.2 1.0

Reference:

Z.Novakova, C.Barinka, L.Motlova. X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027 To Be Published.
Page generated: Thu Aug 1 12:12:29 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy