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Fluorine in PDB 5p9h: BTK1 Cocrystallized with RN983

Enzymatic activity of BTK1 Cocrystallized with RN983

All present enzymatic activity of BTK1 Cocrystallized with RN983:
2.7.10.2;

Protein crystallography data

The structure of BTK1 Cocrystallized with RN983, PDB code: 5p9h was solved by A.S.Gardberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.36 / 1.95
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.761, 101.404, 38.100, 90.00, 90.00, 90.00
R / Rfree (%) 26.7 / 31.3

Fluorine Binding Sites:

The binding sites of Fluorine atom in the BTK1 Cocrystallized with RN983 (pdb code 5p9h). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the BTK1 Cocrystallized with RN983, PDB code: 5p9h:

Fluorine binding site 1 out of 1 in 5p9h

Go back to Fluorine Binding Sites List in 5p9h
Fluorine binding site 1 out of 1 in the BTK1 Cocrystallized with RN983


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of BTK1 Cocrystallized with RN983 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F701

b:48.9
occ:1.00
F21 A:7G7701 0.0 48.9 1.0
C16 A:7G7701 1.3 50.3 1.0
C17 A:7G7701 2.3 49.6 1.0
C12 A:7G7701 2.4 52.8 1.0
O20 A:7G7701 2.7 50.2 1.0
C11 A:7G7701 3.0 52.5 1.0
CD2 A:PHE413 3.2 58.4 1.0
O A:HOH804 3.2 50.6 1.0
OD1 A:ASP539 3.4 58.5 1.0
CE2 A:PHE413 3.5 59.1 1.0
C18 A:7G7701 3.6 50.9 1.0
C13 A:7G7701 3.7 54.4 1.0
CG A:ASP539 4.0 57.0 1.0
C19 A:7G7701 4.2 53.3 1.0
CD1 A:LEU542 4.3 46.8 1.0
N10 A:7G7701 4.3 51.3 1.0
CG A:PHE413 4.4 59.1 1.0
CB A:ASP539 4.6 46.3 1.0
OD2 A:ASP539 4.6 66.3 1.0
N A:GLN412 4.7 54.8 1.0
N A:PHE413 4.7 57.7 1.0
CZ A:PHE413 4.8 56.8 1.0
C22 A:7G7701 4.9 48.9 1.0
CB A:PHE413 4.9 60.5 1.0
C25 A:7G7701 4.9 48.1 1.0
C14 A:7G7701 4.9 55.5 1.0

Reference:

A.T.Bender, A.Gardberg, A.Pereira, T.Johnson, Y.Wu, R.Grenningloh, J.Head, F.Morandi, P.Haselmayer, L.Liu-Bujalski. Ability of Bruton'S Tyrosine Kinase Inhibitors to Sequester Y551 and Prevent Phosphorylation Determines Potency For Inhibition of Fc Receptor But Not B-Cell Receptor Signaling. Mol. Pharmacol. V. 91 208 2017.
ISSN: ESSN 1521-0111
PubMed: 28062735
DOI: 10.1124/MOL.116.107037
Page generated: Sun Dec 13 12:30:37 2020

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