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Fluorine in PDB 5qhr: Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of Human FAM83B in Complex with FMOPL000635A

Protein crystallography data

The structure of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of Human FAM83B in Complex with FMOPL000635A, PDB code: 5qhr was solved by D.M.Pinkas, J.C.Bufton, A.E.Fox, R.Talon, T.Krojer, A.Douangamath, P.Collins, R.Zhang, F.Von Delft, C.Bountra, C.H.Arrowsmith, A.Edwards, A.N.Bullock, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.49 / 1.68
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 50.494, 50.494, 153.169, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 24.2

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of Human FAM83B in Complex with FMOPL000635A (pdb code 5qhr). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of Human FAM83B in Complex with FMOPL000635A, PDB code: 5qhr:

Fluorine binding site 1 out of 1 in 5qhr

Go back to Fluorine Binding Sites List in 5qhr
Fluorine binding site 1 out of 1 in the Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of Human FAM83B in Complex with FMOPL000635A


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) -- Crystal Structure of Human FAM83B in Complex with FMOPL000635A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F203

b:68.9
occ:0.73
F1 A:GQS203 0.0 68.9 0.7
C8 A:GQS203 1.4 52.0 0.7
C9 A:GQS203 2.3 50.0 0.7
C7 A:GQS203 2.3 49.5 0.7
CG A:TYR163 2.7 32.9 1.0
CB A:TYR163 3.0 29.2 1.0
CD1 A:TYR163 3.1 38.8 1.0
CD2 A:TYR163 3.2 36.6 1.0
C4 A:GQS203 3.6 47.4 0.7
C6 A:GQS203 3.6 47.1 0.7
CE1 A:TYR163 3.7 38.5 1.0
CE2 A:TYR163 3.8 40.4 1.0
CE2 A:PHE159 3.8 24.9 1.0
CD2 A:PHE159 4.0 26.2 1.0
CZ A:TYR163 4.0 41.5 1.0
C5 A:GQS203 4.1 46.4 0.7
CA A:TYR163 4.6 27.9 1.0
CA A:ARG160 4.6 26.7 1.0
O A:PHE159 4.7 25.6 1.0
N3 A:GQS203 4.7 45.5 0.7
N2 A:GQS203 4.7 39.0 0.7
CG A:ARG160 4.8 29.1 1.0
CD2 A:TYR63 4.8 30.7 1.0

Reference:

D.M.Pinkas, J.C.Bufton, A.E.Fox, R.Talon, T.Krojer, A.Douangamath, P.Collins, R.Zhang, F.Von Delft, C.Bountra, C.H.Arrowsmith, A.Edwards, A.N.Bullock. Pandda Analysis Group Deposition of Models with Modelled Events (E.G. Bound Ligands) To Be Published.
Page generated: Sun Dec 13 12:31:54 2020

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