Atomistry » Fluorine » PDB 5qts-5ray » 5r5w
Atomistry »
  Fluorine »
    PDB 5qts-5ray »
      5r5w »

Fluorine in PDB 5r5w: Pandda Analysis Group Deposition -- Crystal Structure of Fibrinogen- Like Globe Domain of Human Tenascin-C in Complex with Z2856434942

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Fibrinogen- Like Globe Domain of Human Tenascin-C in Complex with Z2856434942, PDB code: 5r5w was solved by J.A.Coker, G.A.Bezerra, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.M.Edwards, W.W.Yue, B.D.Marsden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.65 / 1.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.290, 77.290, 71.650, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 21.3

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Fibrinogen- Like Globe Domain of Human Tenascin-C in Complex with Z2856434942 (pdb code 5r5w). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Fibrinogen- Like Globe Domain of Human Tenascin-C in Complex with Z2856434942, PDB code: 5r5w:

Fluorine binding site 1 out of 1 in 5r5w

Go back to Fluorine Binding Sites List in 5r5w
Fluorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Fibrinogen- Like Globe Domain of Human Tenascin-C in Complex with Z2856434942


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Fibrinogen- Like Globe Domain of Human Tenascin-C in Complex with Z2856434942 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2401

b:26.3
occ:0.64
F16 A:EJQ2401 0.0 26.3 0.6
C03 A:EJQ2401 1.3 22.1 0.6
C02 A:EJQ2401 2.3 21.1 0.6
C04 A:EJQ2401 2.3 19.5 0.6
CD2 A:PHE2054 3.3 19.6 1.0
O A:TRP2055 3.4 18.0 1.0
C01 A:EJQ2401 3.5 20.1 0.6
CA A:LEU2056 3.6 17.6 1.0
C05 A:EJQ2401 3.6 21.9 0.6
CZ A:ARG2050 3.7 16.8 0.6
CG A:ARG2050 3.7 18.0 0.6
CD1 A:LEU2056 3.8 20.4 1.0
NE A:ARG2050 3.8 17.1 0.6
NH2 A:ARG2050 3.9 19.1 0.6
C A:TRP2055 4.0 17.9 1.0
NH1 A:ARG2050 4.0 18.1 0.6
CE2 A:PHE2054 4.0 18.4 1.0
C06 A:EJQ2401 4.1 23.8 0.6
N A:LEU2056 4.1 19.1 1.0
CG A:PHE2054 4.1 19.0 1.0
O A:PHE2047 4.2 21.8 1.0
CB A:PHE2054 4.2 17.9 1.0
O A:LEU2056 4.3 18.4 1.0
C A:LEU2056 4.3 18.4 1.0
CD A:ARG2050 4.4 18.0 0.6
CB A:LEU2056 4.5 17.9 1.0
N A:PHE2047 4.6 18.5 1.0
CG A:LEU2056 4.7 19.1 1.0
N A:TRP2055 4.8 17.7 1.0
C A:PHE2047 4.8 22.2 1.0

Reference:

J.A.Coker, G.A.Bezerra, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.M.Edwards, W.W.Yue, B.D.Marsden. Pandda Analysis Group Deposition To Be Published.
Page generated: Tue Jul 15 06:48:13 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy