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Fluorine in PDB 5rhh: Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336

Enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336

All present enzymatic activity of Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336:
3.4.21.91; 3.6.1.15; 3.6.4.13;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336, PDB code: 5rhh was solved by A.S.Godoy, N.C.M.R.Mesquita, G.Oliva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.22 / 1.59
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.710, 68.815, 57.266, 90.00, 92.30, 90.00
R / Rfree (%) 17 / 21.5

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336 (pdb code 5rhh). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336, PDB code: 5rhh:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 5rhh

Go back to Fluorine Binding Sites List in 5rhh
Fluorine binding site 1 out of 2 in the Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F705

b:20.6
occ:0.60
F A:UQJ705 0.0 20.6 0.6
C5 A:UQJ705 1.4 21.2 0.6
F1 A:UQJ705 2.2 21.3 0.6
C4 A:UQJ705 2.4 19.4 0.6
N2 A:UQJ705 3.0 20.6 0.6
C2 A:UQJ705 3.6 18.6 0.6
O A:HOH801 3.9 42.8 1.0
N A:UQJ705 4.2 19.6 0.6
C1 A:UQJ705 4.5 18.2 0.6
C3 A:UQJ705 4.5 17.2 0.6

Fluorine binding site 2 out of 2 in 5rhh

Go back to Fluorine Binding Sites List in 5rhh
Fluorine binding site 2 out of 2 in the Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Pandda Analysis Group Deposition -- Crystal Structure of Zika Virus NS3 Helicase in Complex with Z1515654336 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F705

b:21.3
occ:0.60
F1 A:UQJ705 0.0 21.3 0.6
C5 A:UQJ705 1.3 21.2 0.6
F A:UQJ705 2.2 20.6 0.6
O A:HOH801 2.3 42.8 1.0
C4 A:UQJ705 2.3 19.4 0.6
C2 A:UQJ705 3.0 18.6 0.6
C3 A:UQJ705 3.3 17.2 0.6
N2 A:UQJ705 3.6 20.6 0.6
N1 A:UQJ705 3.8 15.2 0.6
O A:UQJ705 4.1 18.3 0.6
C1 A:UQJ705 4.3 18.2 0.6
N A:UQJ705 4.5 19.6 0.6

Reference:

A.S.Godoy, N.C.M.R.Mesquita, G.Oliva. Pandda Analysis Group Deposition To Be Published.
Page generated: Thu Aug 1 13:54:30 2024

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