Fluorine in PDB 5sbp: CD44 Pandda Analysis Group Deposition -- the Hyaluronan-Binding Domain of CD44 in Complex with Z1229798311

The structure of CD44 Pandda Analysis Group Deposition -- the Hyaluronan-Binding Domain of CD44 in Complex with Z1229798311, PDB code: 5sbp was solved by W.J.Bradshaw, V.L.Katis, G.A.Bezerra, L.Koekemoer, F.Von Delft, C.Bountra, P.E.Brennan, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.73 / 1.28
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	30.776, 81.469, 31.991, 90, 117.89, 90
R / Rfree (%)	17 / 20.5

The binding sites of Fluorine atom in the CD44 Pandda Analysis Group Deposition -- the Hyaluronan-Binding Domain of CD44 in Complex with Z1229798311 (pdb code 5sbp). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the CD44 Pandda Analysis Group Deposition -- the Hyaluronan-Binding Domain of CD44 in Complex with Z1229798311, PDB code: 5sbp:

Fluorine binding site 1 out of 1 in the CD44 Pandda Analysis Group Deposition -- the Hyaluronan-Binding Domain of CD44 in Complex with Z1229798311


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of CD44 Pandda Analysis Group Deposition -- the Hyaluronan-Binding Domain of CD44 in Complex with Z1229798311 within 5.0Å range: probe atom residue distance (Å) B Occ A:F201 b:12.8 occ:0.38 F10 A:8BC201 0.0 12.8 0.4 C09 A:8BC201 1.4 12.2 0.4 C11 A:8BC201 2.4 12.2 0.4 C08 A:8BC201 2.4 12.1 0.4 O13 A:8BC201 2.8 12.4 0.4 C12 A:8BC201 2.8 12.2 0.4 O A:ASP139 3.3 15.0 1.0 CD1 A:PHE60 3.3 10.8 1.0 CD A:PRO141 3.5 13.8 1.0 C05 A:8BC201 3.6 12.0 0.4 C07 A:8BC201 3.7 11.5 0.4 CG1 A:VAL137 3.7 10.6 1.0 O14 A:8BC201 3.8 12.5 0.4 CE1 A:PHE60 4.0 11.1 1.0 O1 A:EDO206 4.1 24.2 1.0 C A:ASP139 4.1 15.3 1.0 C06 A:8BC201 4.1 12.0 0.4 CG A:PRO141 4.2 13.6 1.0 CG A:PHE60 4.2 10.6 1.0 CB A:PHE60 4.3 10.2 1.0 CA A:PHE60 4.4 10.3 1.0 O A:PHE60 4.4 9.7 1.0 N04 A:8BC201 4.8 12.0 0.4 C A:PHE60 4.8 10.1 1.0 CA A:LEU140 4.8 14.2 1.0 N A:LEU140 4.8 14.8 1.0 N A:PRO141 4.9 13.8 1.0 CB A:ASP139 4.9 17.2 1.0 CA A:ASP139 4.9 15.5 1.0 N A:ASP139 4.9 15.1 1.0 CB A:VAL137 5.0 10.3 1.0

W.J.Bradshaw, V.L.Katis, G.A.Bezerra, L.Koekemoer, F.Von Delft, C.Bountra, P.E.Brennan, O.Gileadi. CD44 Pandda Analysis Group Deposition To Be Published.