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Fluorine in PDB 5ti2: Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor 7635936

Protein crystallography data

The structure of Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor 7635936, PDB code: 5ti2 was solved by J.-Y.Zhu, S.W.J.Ember, E.Schonbrunn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.02 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.150, 43.910, 78.730, 90.00, 90.00, 90.00
R / Rfree (%) 12.5 / 18.1

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor 7635936 (pdb code 5ti2). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor 7635936, PDB code: 5ti2:

Fluorine binding site 1 out of 1 in 5ti2

Go back to Fluorine Binding Sites List in 5ti2
Fluorine binding site 1 out of 1 in the Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor 7635936


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor 7635936 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F201

b:35.8
occ:1.00
F21 A:7CJ201 0.0 35.8 1.0
C20 A:7CJ201 1.3 32.1 1.0
C22 A:7CJ201 2.3 30.1 1.0
C19 A:7CJ201 2.3 31.3 1.0
H221 A:7CJ201 2.5 36.1 1.0
H191 A:7CJ201 2.6 37.6 1.0
SD A:MET149 2.9 10.6 1.0
HD13 A:ILE146 3.0 13.5 1.0
HD12 A:ILE146 3.2 13.5 1.0
HA A:ILE146 3.4 8.3 1.0
HB A:ILE146 3.5 8.8 1.0
HE3 A:MET149 3.5 13.8 1.0
CD1 A:ILE146 3.5 11.2 1.0
HG2 A:PRO82 3.5 7.7 1.0
C16 A:7CJ201 3.6 28.8 1.0
C18 A:7CJ201 3.6 30.2 1.0
HG3 A:PRO82 3.6 7.7 1.0
HH2 A:TRP81 3.7 11.4 1.0
HB3 A:ASP145 3.8 11.9 1.0
CE A:MET149 3.8 11.5 1.0
HZ2 A:TRP81 4.0 10.9 1.0
CA A:ILE146 4.0 6.9 1.0
CG A:PRO82 4.0 6.4 1.0
CH2 A:TRP81 4.0 9.5 1.0
C17 A:7CJ201 4.1 29.5 1.0
CB A:ILE146 4.1 7.4 1.0
CZ2 A:TRP81 4.1 9.1 1.0
N A:ILE146 4.2 8.4 1.0
HD11 A:ILE146 4.2 13.5 1.0
HB2 A:ASP145 4.3 11.9 1.0
H A:ILE146 4.4 10.1 1.0
CG1 A:ILE146 4.4 8.9 1.0
HE1 A:MET149 4.4 13.8 1.0
HB3 A:PRO82 4.4 9.9 1.0
H181 A:7CJ201 4.4 36.2 1.0
CB A:ASP145 4.5 9.9 1.0
HE2 A:MET149 4.5 13.8 1.0
C A:ASP145 4.5 8.3 1.0
CG A:MET149 4.6 6.6 1.0
O A:HOH341 4.6 24.4 1.0
CB A:PRO82 4.7 8.2 1.0
HG3 A:MET149 4.8 7.9 1.0
O A:ASP145 4.8 8.1 1.0
HB2 A:MET149 4.8 7.0 1.0
CZ3 A:TRP81 4.8 9.1 1.0
O A:HOH400 4.9 13.5 1.0
HG12 A:ILE146 4.9 10.7 1.0

Reference:

B.K.Allen, S.Mehta, S.W.J.Ember, J.Y.Zhu, E.Schonbrunn, N.G.Ayad, S.C.Schurer. Identification of A Novel Class of BRD4 Inhibitors By Computational Screening and Binding Simulations. Acs Omega V. 2 4760 2017.
ISSN: ESSN 2470-1343
PubMed: 28884163
DOI: 10.1021/ACSOMEGA.7B00553
Page generated: Thu Aug 1 15:12:21 2024

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