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Fluorine in PDB 5vee: PAK4 Kinase Domain in Complex with FRAX486

Enzymatic activity of PAK4 Kinase Domain in Complex with FRAX486

All present enzymatic activity of PAK4 Kinase Domain in Complex with FRAX486:
2.7.11.1;

Protein crystallography data

The structure of PAK4 Kinase Domain in Complex with FRAX486, PDB code: 5vee was solved by E.Y.Zhang, B.H.Ha, T.J.Boggon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.50
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.955, 62.955, 183.509, 90.00, 90.00, 90.00
R / Rfree (%) 22.8 / 27.6

Other elements in 5vee:

The structure of PAK4 Kinase Domain in Complex with FRAX486 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the PAK4 Kinase Domain in Complex with FRAX486 (pdb code 5vee). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the PAK4 Kinase Domain in Complex with FRAX486, PDB code: 5vee:

Fluorine binding site 1 out of 1 in 5vee

Go back to Fluorine Binding Sites List in 5vee
Fluorine binding site 1 out of 1 in the PAK4 Kinase Domain in Complex with FRAX486


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of PAK4 Kinase Domain in Complex with FRAX486 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F601

b:99.2
occ:1.00
FAF A:981601 0.0 99.2 1.0
CAS A:981601 1.3 91.8 1.0
CAR A:981601 2.3 88.9 1.0
CAT A:981601 2.4 90.7 1.0
NAU A:981601 2.9 96.1 1.0
CAV A:981601 3.1 0.3 1.0
CBD A:981601 3.6 81.0 1.0
CBF A:981601 3.6 81.0 1.0
CAW A:981601 3.7 0.2 1.0
CG2 A:ILE327 4.0 0.5 1.0
CBE A:981601 4.1 87.9 1.0
CAG A:981601 4.2 0.8 1.0
CBH A:981601 4.3 94.3 1.0
NBA A:981601 4.7 71.1 1.0
N A:ALA402 4.8 78.2 1.0
CA A:GLY401 4.8 76.1 1.0
NBC A:981601 4.8 77.3 1.0
NAI A:981601 4.8 0.8 1.0
CBI A:981601 4.9 0.6 1.0

Reference:

E.Y.Zhang, B.H.Ha, T.J.Boggon. PAK4 Crystal Structures Suggest Unusual Kinase Conformational Movements. Biochim. Biophys. Acta V.1866 356 2018.
ISSN: ISSN 0006-3002
PubMed: 28993291
DOI: 10.1016/J.BBAPAP.2017.10.004
Page generated: Thu Aug 1 16:07:06 2024

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