Fluorine in PDB 6d0n: Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant

The structure of Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant, PDB code: 6d0n was solved by N.B.Last, R.B.Stockbridge, A.E.Wilson, T.Shane, L.Kolmakova-Partensky, A.Koide, S.Koide, C.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.67 / 3.12
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	118.106, 124.843, 135.482, 90.00, 90.00, 90.00
R / Rfree (%)	24.8 / 27

The binding sites of Fluorine atom in the Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant (pdb code 6d0n). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant, PDB code: 6d0n:

Fluorine binding site 1 out of 1 in the Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant within 5.0Å range: probe atom residue distance (Å) B Occ B:F504 b:0.5 occ:1.00 N B:GLU118 2.4 0.1 1.0 OG1 B:THR320 2.6 0.8 1.0 N B:ARG117 2.6 0.0 1.0 C B:ARG117 3.1 0.2 1.0 N B:THR320 3.1 0.0 1.0 CG B:ARG117 3.2 0.9 1.0 CA B:ARG117 3.2 0.7 1.0 CA B:GLU118 3.4 0.9 1.0 CB B:GLU118 3.4 0.0 1.0 CB B:THR320 3.5 0.4 1.0 CZ B:PHE158 3.6 0.7 1.0 C B:GLY116 3.7 0.2 1.0 CB B:ARG117 3.8 0.5 1.0 CG B:GLU118 3.8 0.9 1.0 CA B:THR320 3.9 0.8 1.0 N B:GLY319 3.9 0.5 1.0 CA B:GLY116 4.0 0.2 1.0 C B:GLY319 4.0 0.1 1.0 CA B:GLY319 4.1 0.4 1.0 O B:ARG117 4.1 0.1 1.0 CE1 B:PHE158 4.2 0.4 1.0 CD B:ARG117 4.5 0.4 1.0 CE2 B:PHE158 4.7 0.2 1.0 C B:GLU118 4.7 0.7 1.0 NE B:ARG117 4.7 0.9 1.0 CD2 B:LEU280 4.8 0.3 1.0 O B:GLY116 4.9 0.0 1.0 CG2 B:THR320 4.9 0.4 1.0 N B:GLY119 5.0 0.1 1.0

N.B.Last, R.B.Stockbridge, A.E.Wilson, T.Shane, L.Kolmakova-Partensky, A.Koide, S.Koide, C.Miller. A Clc-Type F-/H+Antiporter in Ion-Swapped Conformations. Nat. Struct. Mol. Biol. V. 25 601 2018.
ISSN: ESSN 1545-9985
PubMed: 29941917
DOI: 10.1038/S41594-018-0082-0