Fluorine in PDB 6d0n: Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant

Protein crystallography data

The structure of Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant, PDB code: 6d0n was solved by N.B.Last, R.B.Stockbridge, A.E.Wilson, T.Shane, L.Kolmakova-Partensky, A.Koide, S.Koide, C.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.67 / 3.12
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 118.106, 124.843, 135.482, 90.00, 90.00, 90.00
R / Rfree (%) 24.8 / 27

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant (pdb code 6d0n). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant, PDB code: 6d0n:

Fluorine binding site 1 out of 1 in 6d0n

Go back to Fluorine Binding Sites List in 6d0n
Fluorine binding site 1 out of 1 in the Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of A Clc-Type Fluoride/Proton Antiporter, V319G Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F504

b:0.5
occ:1.00
N B:GLU118 2.4 0.1 1.0
OG1 B:THR320 2.6 0.8 1.0
N B:ARG117 2.6 0.0 1.0
C B:ARG117 3.1 0.2 1.0
N B:THR320 3.1 0.0 1.0
CG B:ARG117 3.2 0.9 1.0
CA B:ARG117 3.2 0.7 1.0
CA B:GLU118 3.4 0.9 1.0
CB B:GLU118 3.4 0.0 1.0
CB B:THR320 3.5 0.4 1.0
CZ B:PHE158 3.6 0.7 1.0
C B:GLY116 3.7 0.2 1.0
CB B:ARG117 3.8 0.5 1.0
CG B:GLU118 3.8 0.9 1.0
CA B:THR320 3.9 0.8 1.0
N B:GLY319 3.9 0.5 1.0
CA B:GLY116 4.0 0.2 1.0
C B:GLY319 4.0 0.1 1.0
CA B:GLY319 4.1 0.4 1.0
O B:ARG117 4.1 0.1 1.0
CE1 B:PHE158 4.2 0.4 1.0
CD B:ARG117 4.5 0.4 1.0
CE2 B:PHE158 4.7 0.2 1.0
C B:GLU118 4.7 0.7 1.0
NE B:ARG117 4.7 0.9 1.0
CD2 B:LEU280 4.8 0.3 1.0
O B:GLY116 4.9 0.0 1.0
CG2 B:THR320 4.9 0.4 1.0
N B:GLY119 5.0 0.1 1.0

Reference:

N.B.Last, R.B.Stockbridge, A.E.Wilson, T.Shane, L.Kolmakova-Partensky, A.Koide, S.Koide, C.Miller. A Clc-Type F-/H+Antiporter in Ion-Swapped Conformations. Nat. Struct. Mol. Biol. V. 25 601 2018.
ISSN: ESSN 1545-9985
PubMed: 29941917
DOI: 10.1038/S41594-018-0082-0
Page generated: Sun Dec 13 12:47:20 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy