Fluorine in PDB 6da1: ETS1 in Complex with Synthetic Srr Mimic
Protein crystallography data
The structure of ETS1 in Complex with Synthetic Srr Mimic, PDB code: 6da1
was solved by
C.Perez-Borrajero,
M.Okon,
C.S.Lin,
K.Scheu,
M.E.P.Murphy,
B.J.Graves,
L.P.Mcintosh,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
56.78 /
2.00
|
Space group
|
P 32 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
75.330,
75.330,
115.331,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
21.6 /
24.8
|
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Binding sites:
The binding sites of Fluorine atom in the ETS1 in Complex with Synthetic Srr Mimic
(pdb code 6da1). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 20 binding sites of Fluorine where determined in the
ETS1 in Complex with Synthetic Srr Mimic, PDB code: 6da1:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 1 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F283
b:59.7
occ:1.00
|
FD1
|
C:PF5283
|
0.0
|
59.7
|
1.0
|
CD1
|
C:PF5283
|
1.3
|
60.0
|
1.0
|
CE1
|
C:PF5283
|
2.3
|
60.3
|
1.0
|
CG
|
C:PF5283
|
2.4
|
59.9
|
1.0
|
HB3
|
C:PF5283
|
2.5
|
78.0
|
1.0
|
FE1
|
C:PF5283
|
2.7
|
62.0
|
1.0
|
CB
|
C:PF5283
|
2.8
|
65.0
|
1.0
|
N
|
C:PF5283
|
3.1
|
75.1
|
1.0
|
HB
|
B:THR330
|
3.1
|
64.8
|
1.0
|
O
|
B:HOH629
|
3.2
|
50.5
|
1.0
|
O
|
B:HOH671
|
3.3
|
69.1
|
1.0
|
O
|
C:PRO281
|
3.5
|
91.4
|
1.0
|
HA
|
C:SEP282
|
3.5
|
1.0
|
1.0
|
CA
|
C:PF5283
|
3.6
|
71.6
|
1.0
|
CZ
|
C:PF5283
|
3.6
|
58.5
|
1.0
|
CD2
|
C:PF5283
|
3.6
|
57.1
|
1.0
|
HB2
|
C:PF5283
|
3.7
|
78.0
|
1.0
|
HZ2
|
B:TRP338
|
3.8
|
56.2
|
1.0
|
C
|
C:SEP282
|
3.9
|
86.8
|
1.0
|
HG21
|
B:THR330
|
4.0
|
64.9
|
1.0
|
CB
|
B:THR330
|
4.0
|
54.0
|
1.0
|
CE2
|
C:PF5283
|
4.1
|
56.8
|
1.0
|
CA
|
C:SEP282
|
4.2
|
90.0
|
1.0
|
HG22
|
B:THR330
|
4.2
|
64.9
|
1.0
|
HA
|
C:PF5283
|
4.2
|
85.9
|
1.0
|
CG2
|
B:THR330
|
4.3
|
54.1
|
1.0
|
CZ2
|
B:TRP338
|
4.4
|
46.9
|
1.0
|
C
|
C:PRO281
|
4.5
|
91.6
|
1.0
|
OG1
|
B:THR330
|
4.7
|
51.9
|
1.0
|
FZ
|
C:PF5283
|
4.7
|
58.8
|
1.0
|
C
|
C:PF5283
|
4.7
|
72.6
|
1.0
|
FD2
|
C:PF5283
|
4.7
|
57.3
|
1.0
|
O
|
C:SEP282
|
4.8
|
86.1
|
1.0
|
N
|
C:SEP282
|
4.8
|
90.2
|
1.0
|
HH2
|
B:TRP338
|
4.8
|
55.2
|
1.0
|
O
|
B:THR330
|
4.9
|
57.5
|
1.0
|
O
|
C:PF5283
|
4.9
|
69.2
|
1.0
|
HA
|
B:THR330
|
5.0
|
65.1
|
1.0
|
CH2
|
B:TRP338
|
5.0
|
46.0
|
1.0
|
|
Fluorine binding site 2 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 2 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F283
b:57.3
occ:1.00
|
FD2
|
C:PF5283
|
0.0
|
57.3
|
1.0
|
CD2
|
C:PF5283
|
1.3
|
57.1
|
1.0
|
CE2
|
C:PF5283
|
2.3
|
56.8
|
1.0
|
CG
|
C:PF5283
|
2.4
|
59.9
|
1.0
|
HB2
|
C:PF5283
|
2.6
|
78.0
|
1.0
|
FE2
|
C:PF5283
|
2.7
|
56.5
|
1.0
|
CB
|
C:PF5283
|
2.8
|
65.0
|
1.0
|
HA
|
C:PF5283
|
3.0
|
85.9
|
1.0
|
FZ
|
C:PF5286
|
3.0
|
50.4
|
1.0
|
FE1
|
C:PF5286
|
3.2
|
50.1
|
1.0
|
NE1
|
B:TRP338
|
3.3
|
44.4
|
1.0
|
HE1
|
B:TRP338
|
3.3
|
53.3
|
1.0
|
CA
|
C:PF5283
|
3.4
|
71.6
|
1.0
|
HG13
|
B:ILE401
|
3.4
|
75.3
|
1.0
|
HG21
|
B:ILE401
|
3.5
|
68.9
|
1.0
|
CD1
|
B:TRP338
|
3.5
|
44.1
|
1.0
|
HE2
|
B:TYR396
|
3.5
|
52.5
|
1.0
|
CZ
|
C:PF5283
|
3.6
|
58.5
|
1.0
|
CE2
|
B:TRP338
|
3.6
|
45.0
|
1.0
|
CD1
|
C:PF5283
|
3.6
|
60.0
|
1.0
|
HB3
|
C:PF5283
|
3.7
|
78.0
|
1.0
|
HD1
|
B:TRP338
|
3.8
|
53.0
|
1.0
|
HD12
|
B:ILE401
|
3.9
|
77.2
|
1.0
|
CZ
|
C:PF5286
|
4.0
|
50.7
|
1.0
|
CG
|
B:TRP338
|
4.0
|
43.2
|
1.0
|
CD2
|
B:TRP338
|
4.0
|
43.5
|
1.0
|
CE1
|
C:PF5286
|
4.0
|
49.5
|
1.0
|
CE1
|
C:PF5283
|
4.1
|
60.3
|
1.0
|
CZ2
|
B:TRP338
|
4.2
|
46.9
|
1.0
|
CG1
|
B:ILE401
|
4.3
|
62.8
|
1.0
|
CG2
|
B:ILE401
|
4.3
|
57.4
|
1.0
|
CE2
|
B:TYR396
|
4.3
|
43.8
|
1.0
|
HG23
|
B:ILE401
|
4.3
|
68.9
|
1.0
|
N
|
C:PF5283
|
4.3
|
75.1
|
1.0
|
HD11
|
B:ILE401
|
4.4
|
77.2
|
1.0
|
HZ2
|
B:TRP338
|
4.4
|
56.2
|
1.0
|
CD1
|
B:ILE401
|
4.4
|
64.4
|
1.0
|
O
|
C:SEP282
|
4.4
|
86.1
|
1.0
|
HD2
|
B:TYR396
|
4.5
|
54.5
|
1.0
|
C
|
C:PF5283
|
4.5
|
72.6
|
1.0
|
OE1
|
B:GLN336
|
4.5
|
45.9
|
1.0
|
FZ
|
C:PF5283
|
4.7
|
58.8
|
1.0
|
HB3
|
B:TRP338
|
4.7
|
49.9
|
1.0
|
FD1
|
C:PF5283
|
4.7
|
59.7
|
1.0
|
C
|
C:SEP282
|
4.7
|
86.8
|
1.0
|
HH
|
B:TYR396
|
4.8
|
49.7
|
1.0
|
CD2
|
B:TYR396
|
4.8
|
45.5
|
1.0
|
O
|
C:PF5283
|
4.8
|
69.2
|
1.0
|
CB
|
B:ILE401
|
4.9
|
59.9
|
1.0
|
CB
|
B:TRP338
|
4.9
|
41.6
|
1.0
|
CE3
|
B:TRP338
|
4.9
|
43.9
|
1.0
|
HG12
|
B:ILE401
|
5.0
|
75.3
|
1.0
|
|
Fluorine binding site 3 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 3 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F283
b:62.0
occ:1.00
|
FE1
|
C:PF5283
|
0.0
|
62.0
|
1.0
|
CE1
|
C:PF5283
|
1.4
|
60.3
|
1.0
|
CZ
|
C:PF5283
|
2.4
|
58.5
|
1.0
|
CD1
|
C:PF5283
|
2.4
|
60.0
|
1.0
|
FD1
|
C:PF5283
|
2.7
|
59.7
|
1.0
|
FZ
|
C:PF5283
|
2.7
|
58.8
|
1.0
|
O
|
C:PRO281
|
3.1
|
91.4
|
1.0
|
HD13
|
B:LEU421
|
3.2
|
66.3
|
1.0
|
HD22
|
B:LEU421
|
3.2
|
70.0
|
1.0
|
HD11
|
B:LEU421
|
3.4
|
66.3
|
1.0
|
HD21
|
B:LEU421
|
3.4
|
70.0
|
1.0
|
HG22
|
B:THR330
|
3.4
|
64.9
|
1.0
|
HG2
|
C:PRO281
|
3.5
|
0.7
|
1.0
|
HG21
|
B:THR330
|
3.5
|
64.9
|
1.0
|
HH2
|
B:TRP338
|
3.6
|
55.2
|
1.0
|
CE2
|
C:PF5283
|
3.6
|
56.8
|
1.0
|
CG
|
C:PF5283
|
3.7
|
59.9
|
1.0
|
HD2
|
C:PRO281
|
3.7
|
0.1
|
1.0
|
CD1
|
B:LEU421
|
3.7
|
55.3
|
1.0
|
CD2
|
B:LEU421
|
3.7
|
58.3
|
1.0
|
CG2
|
B:THR330
|
3.9
|
54.1
|
1.0
|
CH2
|
B:TRP338
|
4.0
|
46.0
|
1.0
|
HZ2
|
B:TRP338
|
4.0
|
56.2
|
1.0
|
HB
|
B:THR330
|
4.1
|
64.8
|
1.0
|
CD2
|
C:PF5283
|
4.1
|
57.1
|
1.0
|
C
|
C:PRO281
|
4.2
|
91.6
|
1.0
|
CZ2
|
B:TRP338
|
4.2
|
46.9
|
1.0
|
CG
|
C:PRO281
|
4.3
|
84.8
|
1.0
|
CD
|
C:PRO281
|
4.3
|
85.9
|
1.0
|
CG
|
B:LEU421
|
4.4
|
56.0
|
1.0
|
HD12
|
B:LEU421
|
4.5
|
66.3
|
1.0
|
N
|
C:PRO281
|
4.6
|
89.1
|
1.0
|
CB
|
B:THR330
|
4.6
|
54.0
|
1.0
|
HD23
|
B:LEU421
|
4.6
|
70.0
|
1.0
|
HG23
|
B:THR330
|
4.7
|
64.9
|
1.0
|
FE2
|
C:PF5283
|
4.7
|
56.5
|
1.0
|
HA
|
C:SEP282
|
4.8
|
1.0
|
1.0
|
CA
|
C:PRO281
|
4.9
|
91.2
|
1.0
|
HB3
|
C:PF5283
|
4.9
|
78.0
|
1.0
|
CB
|
C:PF5283
|
4.9
|
65.0
|
1.0
|
CZ3
|
B:TRP338
|
4.9
|
44.0
|
1.0
|
HG3
|
C:PRO281
|
4.9
|
0.7
|
1.0
|
HB2
|
B:LEU421
|
5.0
|
67.8
|
1.0
|
O
|
B:HOH629
|
5.0
|
50.5
|
1.0
|
|
Fluorine binding site 4 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 4 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F283
b:56.5
occ:1.00
|
FE2
|
C:PF5283
|
0.0
|
56.5
|
1.0
|
CE2
|
C:PF5283
|
1.4
|
56.8
|
1.0
|
CZ
|
C:PF5283
|
2.4
|
58.5
|
1.0
|
CD2
|
C:PF5283
|
2.4
|
57.1
|
1.0
|
FD2
|
C:PF5283
|
2.7
|
57.3
|
1.0
|
HG23
|
B:ILE401
|
2.7
|
68.9
|
1.0
|
FZ
|
C:PF5283
|
2.7
|
58.8
|
1.0
|
HG21
|
B:ILE401
|
2.8
|
68.9
|
1.0
|
HD12
|
B:ILE401
|
3.0
|
77.2
|
1.0
|
HG
|
B:CYS416
|
3.0
|
79.2
|
1.0
|
CG2
|
B:ILE401
|
3.2
|
57.4
|
1.0
|
CD2
|
B:TRP338
|
3.4
|
43.5
|
1.0
|
CE3
|
B:TRP338
|
3.5
|
43.9
|
1.0
|
CE1
|
C:PF5283
|
3.6
|
60.3
|
1.0
|
CG
|
C:PF5283
|
3.7
|
59.9
|
1.0
|
CE2
|
B:TRP338
|
3.7
|
45.0
|
1.0
|
HG22
|
B:ILE401
|
3.8
|
68.9
|
1.0
|
HE3
|
B:TRP338
|
3.9
|
52.7
|
1.0
|
CZ3
|
B:TRP338
|
3.9
|
44.0
|
1.0
|
CD1
|
B:ILE401
|
3.9
|
64.4
|
1.0
|
HG13
|
B:ILE401
|
3.9
|
75.3
|
1.0
|
CG
|
B:TRP338
|
3.9
|
43.2
|
1.0
|
CZ2
|
B:TRP338
|
4.0
|
46.9
|
1.0
|
CH2
|
B:TRP338
|
4.1
|
46.0
|
1.0
|
CD1
|
C:PF5283
|
4.1
|
60.0
|
1.0
|
HG2
|
C:PRO281
|
4.1
|
0.7
|
1.0
|
SG
|
B:CYS416
|
4.2
|
66.0
|
1.0
|
NE1
|
B:TRP338
|
4.2
|
44.4
|
1.0
|
CG1
|
B:ILE401
|
4.2
|
62.8
|
1.0
|
HD11
|
B:ILE401
|
4.3
|
77.2
|
1.0
|
HB2
|
B:TRP338
|
4.3
|
49.9
|
1.0
|
CB
|
B:ILE401
|
4.3
|
59.9
|
1.0
|
CD1
|
B:TRP338
|
4.3
|
44.1
|
1.0
|
HZ3
|
B:TRP338
|
4.4
|
52.9
|
1.0
|
HD13
|
B:ILE401
|
4.5
|
77.2
|
1.0
|
HZ2
|
B:TRP338
|
4.6
|
56.2
|
1.0
|
CB
|
B:TRP338
|
4.6
|
41.6
|
1.0
|
HB3
|
B:TRP338
|
4.6
|
49.9
|
1.0
|
HH2
|
B:TRP338
|
4.7
|
55.2
|
1.0
|
HE2
|
B:TYR396
|
4.7
|
52.5
|
1.0
|
HE1
|
B:TRP338
|
4.7
|
53.3
|
1.0
|
FE1
|
C:PF5283
|
4.7
|
62.0
|
1.0
|
HG3
|
C:PRO281
|
4.8
|
0.7
|
1.0
|
CB
|
C:PF5283
|
4.9
|
65.0
|
1.0
|
HB2
|
C:PF5283
|
4.9
|
78.0
|
1.0
|
CG
|
C:PRO281
|
4.9
|
84.8
|
1.0
|
HB
|
B:ILE401
|
4.9
|
71.9
|
1.0
|
HD1
|
B:TRP338
|
5.0
|
53.0
|
1.0
|
HD2
|
B:TYR396
|
5.0
|
54.5
|
1.0
|
|
Fluorine binding site 5 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 5 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F283
b:58.8
occ:1.00
|
FZ
|
C:PF5283
|
0.0
|
58.8
|
1.0
|
CZ
|
C:PF5283
|
1.4
|
58.5
|
1.0
|
CE2
|
C:PF5283
|
2.4
|
56.8
|
1.0
|
CE1
|
C:PF5283
|
2.4
|
60.3
|
1.0
|
HD22
|
B:LEU421
|
2.4
|
70.0
|
1.0
|
HG2
|
C:PRO281
|
2.7
|
0.7
|
1.0
|
FE2
|
C:PF5283
|
2.7
|
56.5
|
1.0
|
FE1
|
C:PF5283
|
2.7
|
62.0
|
1.0
|
CD2
|
B:LEU421
|
3.2
|
58.3
|
1.0
|
HG
|
B:CYS416
|
3.3
|
79.2
|
1.0
|
HD21
|
B:LEU421
|
3.3
|
70.0
|
1.0
|
CH2
|
B:TRP338
|
3.4
|
46.0
|
1.0
|
HH2
|
B:TRP338
|
3.5
|
55.2
|
1.0
|
CZ3
|
B:TRP338
|
3.5
|
44.0
|
1.0
|
CG
|
C:PRO281
|
3.5
|
84.8
|
1.0
|
HZ3
|
B:TRP338
|
3.6
|
52.9
|
1.0
|
HD23
|
B:LEU421
|
3.6
|
70.0
|
1.0
|
CD2
|
C:PF5283
|
3.6
|
57.1
|
1.0
|
CD1
|
C:PF5283
|
3.6
|
60.0
|
1.0
|
HG3
|
C:PRO281
|
3.7
|
0.7
|
1.0
|
HD2
|
C:PRO281
|
3.7
|
0.1
|
1.0
|
HD12
|
B:LEU418
|
4.0
|
75.2
|
1.0
|
CZ2
|
B:TRP338
|
4.0
|
46.9
|
1.0
|
CD
|
C:PRO281
|
4.1
|
85.9
|
1.0
|
CE3
|
B:TRP338
|
4.1
|
43.9
|
1.0
|
CG
|
C:PF5283
|
4.2
|
59.9
|
1.0
|
HD13
|
B:LEU421
|
4.2
|
66.3
|
1.0
|
SG
|
B:CYS416
|
4.3
|
66.0
|
1.0
|
HZ2
|
B:TRP338
|
4.4
|
56.2
|
1.0
|
CG
|
B:LEU421
|
4.4
|
56.0
|
1.0
|
HD11
|
B:LEU418
|
4.6
|
75.2
|
1.0
|
CE2
|
B:TRP338
|
4.6
|
45.0
|
1.0
|
HE3
|
B:TRP338
|
4.6
|
52.7
|
1.0
|
HD12
|
B:ILE401
|
4.6
|
77.2
|
1.0
|
O
|
C:PRO281
|
4.6
|
91.4
|
1.0
|
HB2
|
B:LEU421
|
4.6
|
67.8
|
1.0
|
CD2
|
B:TRP338
|
4.6
|
43.5
|
1.0
|
CD1
|
B:LEU418
|
4.7
|
62.6
|
1.0
|
HB2
|
C:PRO281
|
4.7
|
0.1
|
1.0
|
CD1
|
B:LEU421
|
4.7
|
55.3
|
1.0
|
FD2
|
C:PF5283
|
4.7
|
57.3
|
1.0
|
FD1
|
C:PF5283
|
4.7
|
59.7
|
1.0
|
CB
|
C:PRO281
|
4.7
|
88.4
|
1.0
|
HD11
|
B:LEU421
|
4.7
|
66.3
|
1.0
|
HD3
|
C:PRO281
|
4.8
|
0.1
|
1.0
|
HG23
|
B:ILE401
|
4.8
|
68.9
|
1.0
|
HB2
|
B:CYS416
|
4.9
|
84.5
|
1.0
|
HB3
|
B:LEU421
|
4.9
|
67.8
|
1.0
|
HD13
|
B:LEU418
|
4.9
|
75.2
|
1.0
|
HG21
|
B:THR330
|
4.9
|
64.9
|
1.0
|
CB
|
B:LEU421
|
5.0
|
56.5
|
1.0
|
|
Fluorine binding site 6 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 6 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F286
b:45.0
occ:1.00
|
FD1
|
C:PF5286
|
0.0
|
45.0
|
1.0
|
CD1
|
C:PF5286
|
1.3
|
48.1
|
1.0
|
CE1
|
C:PF5286
|
2.3
|
49.5
|
1.0
|
CG
|
C:PF5286
|
2.4
|
50.2
|
1.0
|
HB3
|
C:PF5286
|
2.5
|
58.0
|
1.0
|
FE1
|
C:PF5286
|
2.7
|
50.1
|
1.0
|
CB
|
C:PF5286
|
2.8
|
48.4
|
1.0
|
HE21
|
B:GLN336
|
3.0
|
55.5
|
1.0
|
N
|
C:PF5286
|
3.0
|
52.2
|
1.0
|
HG2
|
B:GLN336
|
3.2
|
50.5
|
1.0
|
NE2
|
B:GLN336
|
3.2
|
46.2
|
1.0
|
HB3
|
B:GLN336
|
3.4
|
47.7
|
1.0
|
O
|
B:HOH639
|
3.4
|
34.2
|
1.0
|
HH
|
B:TYR396
|
3.5
|
49.7
|
1.0
|
OH
|
B:TYR396
|
3.5
|
41.4
|
1.0
|
CA
|
C:PF5286
|
3.5
|
49.2
|
1.0
|
HE22
|
B:GLN336
|
3.6
|
55.5
|
1.0
|
O
|
C:HOH315
|
3.6
|
46.4
|
1.0
|
CD2
|
C:PF5286
|
3.6
|
51.9
|
1.0
|
CZ
|
C:PF5286
|
3.6
|
50.7
|
1.0
|
HA
|
C:SEP285
|
3.6
|
79.9
|
1.0
|
CD
|
B:GLN336
|
3.6
|
44.6
|
1.0
|
HB2
|
C:PF5286
|
3.7
|
58.0
|
1.0
|
CG
|
B:GLN336
|
3.7
|
42.1
|
1.0
|
O
|
C:ASP284
|
3.7
|
89.8
|
1.0
|
C
|
C:SEP285
|
3.9
|
64.8
|
1.0
|
CB
|
B:GLN336
|
4.0
|
39.7
|
1.0
|
CE2
|
C:PF5286
|
4.1
|
52.1
|
1.0
|
HA
|
C:PF5286
|
4.2
|
59.0
|
1.0
|
CA
|
C:SEP285
|
4.2
|
66.6
|
1.0
|
CZ
|
B:TYR396
|
4.3
|
42.7
|
1.0
|
OE1
|
B:GLN336
|
4.4
|
45.9
|
1.0
|
HG3
|
B:GLN336
|
4.6
|
50.5
|
1.0
|
C
|
C:PF5286
|
4.6
|
47.3
|
1.0
|
HB2
|
B:GLN336
|
4.6
|
47.7
|
1.0
|
HD1
|
B:TRP338
|
4.6
|
53.0
|
1.0
|
H
|
B:LEU337
|
4.7
|
46.2
|
1.0
|
C
|
C:ASP284
|
4.7
|
90.1
|
1.0
|
FZ
|
C:PF5286
|
4.7
|
50.4
|
1.0
|
O
|
C:PF5286
|
4.7
|
43.9
|
1.0
|
FD2
|
C:PF5286
|
4.7
|
51.0
|
1.0
|
HA
|
B:GLN336
|
4.8
|
43.5
|
1.0
|
O
|
C:SEP285
|
4.8
|
66.5
|
1.0
|
O
|
C:PF5283
|
4.8
|
69.2
|
1.0
|
HE1
|
B:TYR396
|
4.9
|
51.3
|
1.0
|
HE2
|
B:TYR396
|
4.9
|
52.5
|
1.0
|
CE1
|
B:TYR396
|
4.9
|
42.8
|
1.0
|
CE2
|
B:TYR396
|
4.9
|
43.8
|
1.0
|
N
|
C:SEP285
|
5.0
|
70.5
|
1.0
|
|
Fluorine binding site 7 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 7 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F286
b:51.0
occ:1.00
|
FD2
|
C:PF5286
|
0.0
|
51.0
|
1.0
|
CD2
|
C:PF5286
|
1.3
|
51.9
|
1.0
|
CE2
|
C:PF5286
|
2.3
|
52.1
|
1.0
|
CG
|
C:PF5286
|
2.4
|
50.2
|
1.0
|
HB3
|
B:TYR395
|
2.5
|
62.1
|
1.0
|
HB2
|
C:PF5286
|
2.5
|
58.0
|
1.0
|
FE2
|
C:PF5286
|
2.7
|
53.7
|
1.0
|
CB
|
C:PF5286
|
2.8
|
48.4
|
1.0
|
FE1
|
C:PF5288
|
2.9
|
54.7
|
1.0
|
HA
|
C:PF5286
|
3.0
|
59.0
|
1.0
|
HB2
|
B:TYR395
|
3.3
|
62.1
|
1.0
|
CB
|
B:TYR395
|
3.3
|
51.8
|
1.0
|
CA
|
C:PF5286
|
3.5
|
49.2
|
1.0
|
CZ
|
C:PF5286
|
3.6
|
50.7
|
1.0
|
CD1
|
C:PF5286
|
3.6
|
48.1
|
1.0
|
HB3
|
C:PF5286
|
3.7
|
58.0
|
1.0
|
C
|
B:TYR395
|
4.0
|
51.1
|
1.0
|
CE1
|
C:PF5286
|
4.1
|
49.5
|
1.0
|
O
|
B:TYR395
|
4.2
|
53.8
|
1.0
|
CE1
|
C:PF5288
|
4.2
|
56.4
|
1.0
|
CG
|
B:TYR395
|
4.3
|
53.3
|
1.0
|
HA
|
B:TYR396
|
4.3
|
62.9
|
1.0
|
CE1
|
B:TYR396
|
4.3
|
42.8
|
1.0
|
CD1
|
B:TYR396
|
4.3
|
44.4
|
1.0
|
CA
|
B:TYR395
|
4.3
|
50.4
|
1.0
|
N
|
B:TYR396
|
4.3
|
50.3
|
1.0
|
HE1
|
B:TYR396
|
4.3
|
51.3
|
1.0
|
HD1
|
B:TYR396
|
4.3
|
53.3
|
1.0
|
N
|
C:PF5286
|
4.4
|
52.2
|
1.0
|
O
|
C:SEP285
|
4.5
|
66.5
|
1.0
|
H
|
B:TYR396
|
4.6
|
60.4
|
1.0
|
C
|
C:PF5286
|
4.6
|
47.3
|
1.0
|
HD1
|
B:TYR395
|
4.7
|
67.7
|
1.0
|
FZ
|
C:PF5286
|
4.7
|
50.4
|
1.0
|
FD1
|
C:PF5286
|
4.7
|
45.0
|
1.0
|
FZ
|
C:PF5288
|
4.8
|
65.1
|
1.0
|
CZ
|
B:TYR396
|
4.8
|
42.7
|
1.0
|
CG
|
B:TYR396
|
4.8
|
46.0
|
1.0
|
C
|
C:SEP285
|
4.8
|
64.8
|
1.0
|
HA
|
B:TYR395
|
4.8
|
60.4
|
1.0
|
CA
|
B:TYR396
|
4.8
|
52.4
|
1.0
|
CD1
|
B:TYR395
|
4.8
|
56.4
|
1.0
|
FD1
|
C:PF5288
|
4.9
|
49.3
|
1.0
|
FD2
|
C:PF5291
|
5.0
|
45.5
|
1.0
|
O
|
B:GLY392
|
5.0
|
45.6
|
1.0
|
|
Fluorine binding site 8 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 8 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F286
b:50.1
occ:1.00
|
FE1
|
C:PF5286
|
0.0
|
50.1
|
1.0
|
CE1
|
C:PF5286
|
1.4
|
49.5
|
1.0
|
CZ
|
C:PF5286
|
2.4
|
50.7
|
1.0
|
CD1
|
C:PF5286
|
2.4
|
48.1
|
1.0
|
HB2
|
C:PF5283
|
2.7
|
78.0
|
1.0
|
FD1
|
C:PF5286
|
2.7
|
45.0
|
1.0
|
FZ
|
C:PF5286
|
2.7
|
50.4
|
1.0
|
HE22
|
B:GLN336
|
3.2
|
55.5
|
1.0
|
HH
|
B:TYR396
|
3.2
|
49.7
|
1.0
|
FD2
|
C:PF5283
|
3.2
|
57.3
|
1.0
|
NE2
|
B:GLN336
|
3.3
|
46.2
|
1.0
|
HD1
|
B:TRP338
|
3.4
|
53.0
|
1.0
|
CD
|
B:GLN336
|
3.4
|
44.6
|
1.0
|
OE1
|
B:GLN336
|
3.4
|
45.9
|
1.0
|
HE1
|
B:TRP338
|
3.4
|
53.3
|
1.0
|
HE2
|
B:TYR396
|
3.4
|
52.5
|
1.0
|
O
|
C:ASP284
|
3.4
|
89.8
|
1.0
|
CB
|
C:PF5283
|
3.6
|
65.0
|
1.0
|
O
|
C:PF5283
|
3.6
|
69.2
|
1.0
|
CE2
|
C:PF5286
|
3.6
|
52.1
|
1.0
|
CG
|
C:PF5286
|
3.7
|
50.2
|
1.0
|
OH
|
B:TYR396
|
3.7
|
41.4
|
1.0
|
HE21
|
B:GLN336
|
3.7
|
55.5
|
1.0
|
HB3
|
B:GLN336
|
3.7
|
47.7
|
1.0
|
NE1
|
B:TRP338
|
3.8
|
44.4
|
1.0
|
CD1
|
B:TRP338
|
3.8
|
44.1
|
1.0
|
HA
|
C:PF5283
|
3.8
|
85.9
|
1.0
|
CE2
|
B:TYR396
|
3.8
|
43.8
|
1.0
|
C
|
C:PF5283
|
3.9
|
72.6
|
1.0
|
CA
|
C:PF5283
|
4.0
|
71.6
|
1.0
|
CZ
|
B:TYR396
|
4.0
|
42.7
|
1.0
|
CD2
|
C:PF5286
|
4.1
|
51.9
|
1.0
|
HB3
|
C:PF5283
|
4.1
|
78.0
|
1.0
|
CD2
|
C:PF5283
|
4.2
|
57.1
|
1.0
|
CG
|
B:GLN336
|
4.3
|
42.1
|
1.0
|
CB
|
B:GLN336
|
4.3
|
39.7
|
1.0
|
HG2
|
B:GLN336
|
4.3
|
50.5
|
1.0
|
CG
|
C:PF5283
|
4.4
|
59.9
|
1.0
|
HB2
|
B:GLN336
|
4.4
|
47.7
|
1.0
|
C
|
C:ASP284
|
4.5
|
90.1
|
1.0
|
N
|
C:ASP284
|
4.6
|
92.6
|
1.0
|
FE2
|
C:PF5286
|
4.7
|
53.7
|
1.0
|
CD2
|
B:TYR396
|
4.8
|
45.5
|
1.0
|
HA
|
C:SEP285
|
4.8
|
79.9
|
1.0
|
HB3
|
C:PF5286
|
4.9
|
58.0
|
1.0
|
CB
|
C:PF5286
|
4.9
|
48.4
|
1.0
|
CG
|
B:TRP338
|
5.0
|
43.2
|
1.0
|
CE2
|
B:TRP338
|
5.0
|
45.0
|
1.0
|
|
Fluorine binding site 9 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 9 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F286
b:53.7
occ:1.00
|
FE2
|
C:PF5286
|
0.0
|
53.7
|
1.0
|
CE2
|
C:PF5286
|
1.4
|
52.1
|
1.0
|
CZ
|
C:PF5286
|
2.4
|
50.7
|
1.0
|
CD2
|
C:PF5286
|
2.4
|
51.9
|
1.0
|
HA
|
B:TYR396
|
2.5
|
62.9
|
1.0
|
FD2
|
C:PF5286
|
2.7
|
51.0
|
1.0
|
FZ
|
C:PF5286
|
2.7
|
50.4
|
1.0
|
HB2
|
B:LYS399
|
3.1
|
87.4
|
1.0
|
HG3
|
B:LYS399
|
3.3
|
90.2
|
1.0
|
O
|
B:TYR395
|
3.4
|
53.8
|
1.0
|
CA
|
B:TYR396
|
3.4
|
52.4
|
1.0
|
CE1
|
C:PF5286
|
3.6
|
49.5
|
1.0
|
CG
|
C:PF5286
|
3.7
|
50.2
|
1.0
|
C
|
B:TYR395
|
3.8
|
51.1
|
1.0
|
N
|
B:TYR396
|
3.8
|
50.3
|
1.0
|
CG
|
B:TYR396
|
3.8
|
46.0
|
1.0
|
CB
|
B:LYS399
|
3.8
|
72.9
|
1.0
|
CD2
|
B:TYR396
|
3.9
|
45.5
|
1.0
|
CG
|
B:LYS399
|
3.9
|
75.2
|
1.0
|
HB3
|
B:TYR395
|
4.0
|
62.1
|
1.0
|
HG2
|
B:LYS399
|
4.0
|
90.2
|
1.0
|
HD2
|
B:TYR396
|
4.1
|
54.5
|
1.0
|
CD1
|
C:PF5286
|
4.1
|
48.1
|
1.0
|
CD1
|
B:TYR396
|
4.1
|
44.4
|
1.0
|
CB
|
B:TYR396
|
4.2
|
49.7
|
1.0
|
HB3
|
B:LYS399
|
4.2
|
87.4
|
1.0
|
CE2
|
B:TYR396
|
4.2
|
43.8
|
1.0
|
H
|
B:LYS399
|
4.3
|
87.5
|
1.0
|
H
|
B:TYR396
|
4.3
|
60.4
|
1.0
|
HG13
|
B:ILE401
|
4.4
|
75.3
|
1.0
|
C
|
B:TYR396
|
4.4
|
52.9
|
1.0
|
HD1
|
B:TYR396
|
4.5
|
53.3
|
1.0
|
CE1
|
B:TYR396
|
4.5
|
42.8
|
1.0
|
CZ
|
B:TYR396
|
4.6
|
42.7
|
1.0
|
O
|
B:TYR396
|
4.6
|
52.4
|
1.0
|
HB3
|
B:TYR396
|
4.6
|
59.6
|
1.0
|
HE2
|
B:TYR396
|
4.7
|
52.5
|
1.0
|
HG12
|
B:ILE401
|
4.7
|
75.3
|
1.0
|
CB
|
B:TYR395
|
4.7
|
51.8
|
1.0
|
FE1
|
C:PF5286
|
4.7
|
50.1
|
1.0
|
HB2
|
B:TYR395
|
4.8
|
62.1
|
1.0
|
CA
|
B:TYR395
|
4.9
|
50.4
|
1.0
|
HB2
|
C:PF5286
|
4.9
|
58.0
|
1.0
|
CB
|
C:PF5286
|
4.9
|
48.4
|
1.0
|
HB
|
B:ILE401
|
4.9
|
71.9
|
1.0
|
O
|
C:ASP284
|
4.9
|
89.8
|
1.0
|
HB2
|
B:TYR396
|
5.0
|
59.6
|
1.0
|
N
|
B:LYS399
|
5.0
|
72.9
|
1.0
|
CG1
|
B:ILE401
|
5.0
|
62.8
|
1.0
|
|
Fluorine binding site 10 out
of 20 in 6da1
Go back to
Fluorine Binding Sites List in 6da1
Fluorine binding site 10 out
of 20 in the ETS1 in Complex with Synthetic Srr Mimic
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of ETS1 in Complex with Synthetic Srr Mimic within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F286
b:50.4
occ:1.00
|
FZ
|
C:PF5286
|
0.0
|
50.4
|
1.0
|
CZ
|
C:PF5286
|
1.4
|
50.7
|
1.0
|
CE1
|
C:PF5286
|
2.4
|
49.5
|
1.0
|
CE2
|
C:PF5286
|
2.4
|
52.1
|
1.0
|
FE1
|
C:PF5286
|
2.7
|
50.1
|
1.0
|
FE2
|
C:PF5286
|
2.7
|
53.7
|
1.0
|
HG13
|
B:ILE401
|
3.0
|
75.3
|
1.0
|
FD2
|
C:PF5283
|
3.0
|
57.3
|
1.0
|
HE2
|
B:TYR396
|
3.2
|
52.5
|
1.0
|
CE2
|
B:TYR396
|
3.4
|
43.8
|
1.0
|
HD2
|
B:TYR396
|
3.5
|
54.5
|
1.0
|
CD2
|
B:TYR396
|
3.5
|
45.5
|
1.0
|
HA
|
C:PF5283
|
3.6
|
85.9
|
1.0
|
CD2
|
C:PF5286
|
3.6
|
51.9
|
1.0
|
CD1
|
C:PF5286
|
3.6
|
48.1
|
1.0
|
CG1
|
B:ILE401
|
3.9
|
62.8
|
1.0
|
HB2
|
B:LYS399
|
4.0
|
87.4
|
1.0
|
HB2
|
C:PF5283
|
4.1
|
78.0
|
1.0
|
HG3
|
B:LYS399
|
4.1
|
90.2
|
1.0
|
O
|
C:ASP284
|
4.1
|
89.8
|
1.0
|
HG12
|
B:ILE401
|
4.1
|
75.3
|
1.0
|
CG
|
C:PF5286
|
4.2
|
50.2
|
1.0
|
CZ
|
B:TYR396
|
4.2
|
42.7
|
1.0
|
HG21
|
B:ILE401
|
4.2
|
68.9
|
1.0
|
HA
|
B:TYR396
|
4.2
|
62.9
|
1.0
|
CD2
|
C:PF5283
|
4.3
|
57.1
|
1.0
|
CA
|
C:PF5283
|
4.3
|
71.6
|
1.0
|
HB3
|
B:LYS399
|
4.3
|
87.4
|
1.0
|
CG
|
B:TYR396
|
4.4
|
46.0
|
1.0
|
HB
|
B:ILE401
|
4.5
|
71.9
|
1.0
|
HH
|
B:TYR396
|
4.5
|
49.7
|
1.0
|
C
|
C:PF5283
|
4.5
|
72.6
|
1.0
|
CB
|
C:PF5283
|
4.6
|
65.0
|
1.0
|
CB
|
B:LYS399
|
4.6
|
72.9
|
1.0
|
HD1
|
B:TRP338
|
4.6
|
53.0
|
1.0
|
CB
|
B:ILE401
|
4.7
|
59.9
|
1.0
|
HD11
|
B:ILE401
|
4.7
|
77.2
|
1.0
|
OH
|
B:TYR396
|
4.7
|
41.4
|
1.0
|
FD2
|
C:PF5286
|
4.7
|
51.0
|
1.0
|
FD1
|
C:PF5286
|
4.7
|
45.0
|
1.0
|
H
|
C:ASP284
|
4.7
|
0.1
|
1.0
|
N
|
C:ASP284
|
4.8
|
92.6
|
1.0
|
CD1
|
B:ILE401
|
4.8
|
64.4
|
1.0
|
CG
|
B:LYS399
|
4.8
|
75.2
|
1.0
|
CG2
|
B:ILE401
|
4.9
|
57.4
|
1.0
|
CG
|
C:PF5283
|
4.9
|
59.9
|
1.0
|
HD12
|
B:ILE401
|
4.9
|
77.2
|
1.0
|
CE1
|
B:TYR396
|
4.9
|
42.8
|
1.0
|
CD1
|
B:TRP338
|
5.0
|
44.1
|
1.0
|
|
Reference:
C.Perez-Borrajero,
C.S.Lin,
M.Okon,
K.Scheu,
B.J.Graves,
M.E.P.Murphy,
L.P.Mcintosh.
The Biophysical Basis For Phosphorylation-Enhanced Dna-Binding Autoinhibition of the ETS1 Transcription Factor. J. Mol. Biol. V. 431 593 2019.
ISSN: ESSN 1089-8638
PubMed: 30597162
DOI: 10.1016/J.JMB.2018.12.011
Page generated: Thu Aug 1 18:52:32 2024
|