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Fluorine in PDB 6epr: The ATAD2 Bromodomain in Complex with Compound Uzh-DS15

Enzymatic activity of The ATAD2 Bromodomain in Complex with Compound Uzh-DS15

All present enzymatic activity of The ATAD2 Bromodomain in Complex with Compound Uzh-DS15:
3.6.1.3;

Protein crystallography data

The structure of The ATAD2 Bromodomain in Complex with Compound Uzh-DS15, PDB code: 6epr was solved by P.Sledz, A.Caflisch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.89 / 2.05
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 80.087, 80.087, 137.844, 90.00, 90.00, 120.00
R / Rfree (%) 19.6 / 23.2

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The ATAD2 Bromodomain in Complex with Compound Uzh-DS15 (pdb code 6epr). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the The ATAD2 Bromodomain in Complex with Compound Uzh-DS15, PDB code: 6epr:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 6epr

Go back to Fluorine Binding Sites List in 6epr
Fluorine binding site 1 out of 2 in the The ATAD2 Bromodomain in Complex with Compound Uzh-DS15


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The ATAD2 Bromodomain in Complex with Compound Uzh-DS15 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1201

b:56.5
occ:1.00
FAE A:BQE1201 0.0 56.5 1.0
CBH A:BQE1201 1.4 57.8 1.0
FAF A:BQE1201 2.2 58.8 1.0
CAQ A:BQE1201 2.4 62.6 1.0
CAP A:BQE1201 2.4 46.2 1.0
NH1 A:ARG1077 3.1 33.0 1.0
O A:HOH1335 3.2 51.4 1.0
O A:HOH1368 3.5 46.6 1.0
CAM A:BQE1201 3.7 57.2 1.0
CAL A:BQE1201 3.7 48.1 1.0
CBE A:BQE1201 4.2 53.3 1.0
CZ A:ARG1077 4.4 39.5 1.0
O A:HOH1325 4.6 35.6 1.0
NH2 A:ARG1077 4.8 35.2 1.0
CB A:VAL1008 4.8 40.1 1.0

Fluorine binding site 2 out of 2 in 6epr

Go back to Fluorine Binding Sites List in 6epr
Fluorine binding site 2 out of 2 in the The ATAD2 Bromodomain in Complex with Compound Uzh-DS15


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of The ATAD2 Bromodomain in Complex with Compound Uzh-DS15 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1201

b:58.8
occ:1.00
FAF A:BQE1201 0.0 58.8 1.0
CBH A:BQE1201 1.4 57.8 1.0
FAE A:BQE1201 2.2 56.5 1.0
CAQ A:BQE1201 2.4 62.6 1.0
CAP A:BQE1201 2.4 46.2 1.0
CAM A:BQE1201 2.9 57.2 1.0
CAL A:BQE1201 2.9 48.1 1.0
CG1 A:ILE1074 3.3 42.3 1.0
CD1 A:ILE1074 3.3 47.1 1.0
CBE A:BQE1201 3.5 53.3 1.0
NH1 A:ARG1077 3.9 33.0 1.0
CG2 A:VAL1008 3.9 53.6 1.0
CB A:VAL1008 4.2 40.1 1.0
CG1 A:VAL1008 4.7 42.4 1.0
CB A:ILE1074 4.7 41.1 1.0
CAK A:BQE1201 4.7 53.8 1.0
CAO A:BQE1201 4.8 50.5 1.0

Reference:

P.Sledz, P.Sledz, A.Caflisch. N/A N/A.
Page generated: Tue Jul 15 11:16:52 2025

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