Atomistry » Fluorine » PDB 6eog-6fet » 6f4z
Atomistry »
  Fluorine »
    PDB 6eog-6fet »
      6f4z »

Fluorine in PDB 6f4z: 2'F-Arag Modified Quadruplex with Flipped G-Tract and Central Tetrad

Fluorine Binding Sites:

The binding sites of Fluorine atom in the 2'F-Arag Modified Quadruplex with Flipped G-Tract and Central Tetrad (pdb code 6f4z). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the 2'F-Arag Modified Quadruplex with Flipped G-Tract and Central Tetrad, PDB code: 6f4z:

Fluorine binding site 1 out of 1 in 6f4z

Go back to Fluorine Binding Sites List in 6f4z
Fluorine binding site 1 out of 1 in the 2'F-Arag Modified Quadruplex with Flipped G-Tract and Central Tetrad


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of 2'F-Arag Modified Quadruplex with Flipped G-Tract and Central Tetrad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F15

b:0.0
occ:1.00
F A:GFL15 0.0 0.0 1.0
C2' A:GFL15 1.4 0.0 1.0
H2' A:GFL15 2.0 0.0 1.0
H8 A:GFL15 2.4 0.0 1.0
C3' A:GFL15 2.4 0.0 1.0
C1' A:GFL15 2.4 0.0 1.0
H3' A:GFL15 2.5 0.0 1.0
C8 A:GFL15 2.9 0.0 1.0
N9 A:GFL15 3.0 0.0 1.0
O4' A:GFL15 3.0 0.0 1.0
O5' A:GFL15 3.0 0.0 1.0
C4' A:GFL15 3.1 0.0 1.0
H1' A:GFL15 3.3 0.0 1.0
H2'' A:DG14 3.4 0.0 1.0
H22 A:DG3 3.5 0.0 1.0
O3' A:GFL15 3.5 0.0 1.0
C5' A:GFL15 3.6 0.0 1.0
N2 A:DG3 4.0 0.0 1.0
H21 A:DG3 4.1 0.0 1.0
H4' A:GFL15 4.1 0.0 1.0
H8 A:DG16 4.1 0.0 1.0
N7 A:GFL15 4.2 0.0 1.0
C4 A:GFL15 4.3 0.0 1.0
H5'1 A:GFL15 4.3 0.0 1.0
O2P A:GFL15 4.3 0.0 1.0
P A:GFL15 4.3 0.0 1.0
H5'2 A:GFL15 4.4 0.0 1.0
C2' A:DG14 4.5 0.0 1.0
N7 A:DG16 4.6 0.0 1.0
C8 A:DG16 4.7 0.0 1.0
C5 A:GFL15 4.9 0.0 1.0
H2' A:DG14 4.9 0.0 1.0
P A:DG16 4.9 0.0 1.0
C2 A:DG3 4.9 0.0 1.0
H1' A:DG14 5.0 0.0 1.0

Reference:

J.Dickerhoff, K.Weisz. Fluorine-Mediated Editing of A G-Quadruplex Folding Pathway. Chembiochem V. 19 927 2018.
ISSN: ESSN 1439-7633
PubMed: 29460996
DOI: 10.1002/CBIC.201800099
Page generated: Thu Aug 1 19:51:56 2024

Last articles

Cl in 3ZFZ
Cl in 3ZG0
Cl in 3ZG1
Cl in 3ZG2
Cl in 3ZEU
Cl in 3ZFT
Cl in 3ZFP
Cl in 3ZFK
Cl in 3ZFO
Cl in 3ZFN
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy