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Fluorine in PDB 6f9l: Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose

Enzymatic activity of Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose

All present enzymatic activity of Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose:
3.2.1.2;

Protein crystallography data

The structure of Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose, PDB code: 6f9l was solved by K.Tantanarat, C.E.M.Stevenson, M.Rejzek, D.M.Lawson, R.A.Field, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 64.76 / 1.77
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 73.080, 99.410, 64.760, 90.00, 90.00, 90.00
R / Rfree (%) 15.9 / 19.9

Other elements in 6f9l:

The structure of Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose (pdb code 6f9l). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose, PDB code: 6f9l:

Fluorine binding site 1 out of 1 in 6f9l

Go back to Fluorine Binding Sites List in 6f9l
Fluorine binding site 1 out of 1 in the Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3- Fluoro-Maltose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F601

b:50.9
occ:1.00
 F3' A:D0N601 0.0 50.9 1.0
C3' A:D0N601 1.4 49.2 1.0
C2' A:D0N601 2.3 50.1 1.0
C4' A:D0N601 2.4 48.9 1.0
O2' A:D0N601 2.8 45.8 1.0
O1 A:D0N601 3.0 43.5 1.0
O A:HOH845 3.0 50.1 1.0
C1 A:D0N601 3.2 40.1 1.0
O A:HOH996 3.3 59.7 1.0
CD1 A:LEU417 3.6 42.0 1.0
C1' A:D0N601 3.7 48.5 1.0
C5' A:D0N601 3.8 49.2 1.0
O5 A:D0N601 4.0 38.9 1.0
O5' A:D0N601 4.1 46.9 1.0
O1' A:D0N601 4.3 48.9 1.0
O2 A:D0N601 4.3 36.0 1.0
C2 A:D0N601 4.3 38.3 1.0
O A:ALA380 4.3 36.2 1.0
NH2 A:ARG418 4.7 40.9 1.0
O A:HOH803 4.7 67.6 1.0
C6' A:D0N601 5.0 47.8 1.0
CG A:LEU417 5.0 40.2 1.0

Reference:

K.Tantanarat, C.E.M.Stevenson, M.Rejzek, D.M.Lawson, R.A.Field. Crystal Structure of Barley Beta-Amylase Complexed with 3-Deoxy-3-Fluoro-Maltose To Be Published.
Page generated: Thu Aug 1 19:53:06 2024

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