Fluorine in PDB 6fn1: Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM)
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM)
(pdb code 6fn1). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM), PDB code: 6fn1:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 6fn1
Go back to
Fluorine Binding Sites List in 6fn1
Fluorine binding site 1 out
of 4 in the Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1304
b:65.1
occ:1.00
|
F01
|
A:ZQU1304
|
0.0
|
65.1
|
1.0
|
C03
|
A:ZQU1304
|
1.4
|
65.1
|
1.0
|
F02
|
A:ZQU1304
|
2.2
|
65.1
|
1.0
|
C01
|
A:ZQU1304
|
2.5
|
65.1
|
1.0
|
C02
|
A:ZQU1304
|
2.5
|
65.1
|
1.0
|
C04
|
A:ZQU1304
|
2.9
|
65.1
|
1.0
|
C05
|
A:ZQU1304
|
3.0
|
65.1
|
1.0
|
C09
|
A:ZQU1304
|
3.1
|
65.1
|
1.0
|
CD2
|
A:LEU338
|
3.1
|
0.9
|
1.0
|
CG2
|
A:ILE339
|
3.4
|
0.2
|
1.0
|
C10
|
A:ZQU1304
|
3.4
|
65.1
|
1.0
|
CA
|
A:ILE339
|
3.8
|
0.2
|
1.0
|
C07
|
A:ZQU1304
|
3.8
|
65.1
|
1.0
|
N
|
A:ILE339
|
3.8
|
0.2
|
1.0
|
O
|
A:LEU338
|
3.8
|
0.9
|
1.0
|
C08
|
A:ZQU1304
|
3.9
|
65.1
|
1.0
|
C
|
A:LEU338
|
3.9
|
0.9
|
1.0
|
CB
|
A:ILE339
|
4.1
|
0.2
|
1.0
|
C17
|
A:ZQU1304
|
4.2
|
65.1
|
1.0
|
CG
|
A:LEU338
|
4.2
|
0.9
|
1.0
|
CB
|
A:PHE342
|
4.4
|
0.0
|
1.0
|
C18
|
A:ZQU1304
|
4.5
|
65.1
|
1.0
|
C06
|
A:ZQU1304
|
4.5
|
65.1
|
1.0
|
CG
|
A:PHE342
|
4.6
|
0.0
|
1.0
|
CB
|
A:LEU338
|
4.6
|
0.9
|
1.0
|
F02
|
A:ZQU1305
|
4.7
|
64.3
|
1.0
|
C13
|
A:ZQU1304
|
4.7
|
65.1
|
1.0
|
CD2
|
A:PHE342
|
4.8
|
0.0
|
1.0
|
C14
|
A:ZQU1304
|
4.9
|
65.1
|
1.0
|
C19
|
A:ZQU1304
|
4.9
|
65.1
|
1.0
|
CA
|
A:LEU338
|
4.9
|
0.9
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 6fn1
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Fluorine Binding Sites List in 6fn1
Fluorine binding site 2 out
of 4 in the Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1304
b:65.1
occ:1.00
|
F02
|
A:ZQU1304
|
0.0
|
65.1
|
1.0
|
C03
|
A:ZQU1304
|
1.4
|
65.1
|
1.0
|
F01
|
A:ZQU1304
|
2.2
|
65.1
|
1.0
|
C01
|
A:ZQU1304
|
2.5
|
65.1
|
1.0
|
C02
|
A:ZQU1304
|
2.5
|
65.1
|
1.0
|
CD2
|
A:LEU338
|
3.1
|
0.9
|
1.0
|
F02
|
A:ZQU1305
|
3.4
|
64.3
|
1.0
|
C04
|
A:ZQU1304
|
3.7
|
65.1
|
1.0
|
C05
|
A:ZQU1304
|
3.8
|
65.1
|
1.0
|
CG
|
A:PHE342
|
3.8
|
0.0
|
1.0
|
CD2
|
A:PHE342
|
3.9
|
0.0
|
1.0
|
C09
|
A:ZQU1304
|
4.0
|
65.1
|
1.0
|
CD1
|
A:PHE342
|
4.1
|
0.0
|
1.0
|
CG2
|
A:ILE305
|
4.1
|
0.4
|
1.0
|
CE2
|
A:PHE342
|
4.2
|
0.0
|
1.0
|
CG
|
A:LEU338
|
4.2
|
0.9
|
1.0
|
C10
|
A:ZQU1304
|
4.3
|
65.1
|
1.0
|
CE1
|
A:PHE342
|
4.3
|
0.0
|
1.0
|
CZ
|
A:PHE342
|
4.3
|
0.0
|
1.0
|
CB
|
A:PHE342
|
4.4
|
0.0
|
1.0
|
CB
|
A:ILE305
|
4.6
|
0.4
|
1.0
|
O
|
A:LEU338
|
4.6
|
0.9
|
1.0
|
C03
|
A:ZQU1305
|
4.7
|
64.3
|
1.0
|
C07
|
A:ZQU1304
|
4.9
|
65.1
|
1.0
|
CD1
|
A:ILE305
|
4.9
|
0.4
|
1.0
|
C08
|
A:ZQU1304
|
5.0
|
65.1
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 6fn1
Go back to
Fluorine Binding Sites List in 6fn1
Fluorine binding site 3 out
of 4 in the Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1305
b:64.3
occ:1.00
|
F01
|
A:ZQU1305
|
0.0
|
64.3
|
1.0
|
C03
|
A:ZQU1305
|
1.4
|
64.3
|
1.0
|
F02
|
A:ZQU1305
|
2.2
|
64.3
|
1.0
|
C02
|
A:ZQU1305
|
2.5
|
64.3
|
1.0
|
C01
|
A:ZQU1305
|
2.5
|
64.3
|
1.0
|
C04
|
A:ZQU1305
|
2.9
|
64.3
|
1.0
|
C05
|
A:ZQU1305
|
2.9
|
64.3
|
1.0
|
C09
|
A:ZQU1305
|
3.2
|
64.3
|
1.0
|
C10
|
A:ZQU1305
|
3.3
|
64.3
|
1.0
|
CD1
|
A:TRP231
|
3.3
|
0.2
|
1.0
|
NE1
|
A:TRP231
|
3.3
|
0.2
|
1.0
|
CE1
|
A:PHE342
|
3.8
|
0.0
|
1.0
|
CD1
|
A:PHE342
|
3.8
|
0.0
|
1.0
|
C07
|
A:ZQU1305
|
3.9
|
64.3
|
1.0
|
C08
|
A:ZQU1305
|
3.9
|
64.3
|
1.0
|
C17
|
A:ZQU1305
|
4.2
|
64.3
|
1.0
|
C18
|
A:ZQU1305
|
4.3
|
64.3
|
1.0
|
C06
|
A:ZQU1305
|
4.5
|
64.3
|
1.0
|
CG
|
A:TRP231
|
4.6
|
0.2
|
1.0
|
CE2
|
A:TRP231
|
4.6
|
0.2
|
1.0
|
C13
|
A:ZQU1305
|
4.8
|
64.3
|
1.0
|
C14
|
A:ZQU1305
|
4.8
|
64.3
|
1.0
|
C19
|
A:ZQU1305
|
4.9
|
64.3
|
1.0
|
C20
|
A:ZQU1305
|
5.0
|
64.3
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 6fn1
Go back to
Fluorine Binding Sites List in 6fn1
Fluorine binding site 4 out
of 4 in the Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Zosuquidar and UIC2 Fab Complex of Human-Mouse Chimeric ABCB1 (ABCB1HM) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1305
b:64.3
occ:1.00
|
F02
|
A:ZQU1305
|
0.0
|
64.3
|
1.0
|
C03
|
A:ZQU1305
|
1.4
|
64.3
|
1.0
|
F01
|
A:ZQU1305
|
2.2
|
64.3
|
1.0
|
C01
|
A:ZQU1305
|
2.4
|
64.3
|
1.0
|
C02
|
A:ZQU1305
|
2.6
|
64.3
|
1.0
|
CD1
|
A:PHE342
|
3.0
|
0.0
|
1.0
|
C01
|
A:ZQU1304
|
3.2
|
65.1
|
1.0
|
CE1
|
A:PHE342
|
3.2
|
0.0
|
1.0
|
F02
|
A:ZQU1304
|
3.4
|
65.1
|
1.0
|
C04
|
A:ZQU1305
|
3.6
|
64.3
|
1.0
|
C03
|
A:ZQU1304
|
3.7
|
65.1
|
1.0
|
CG
|
A:PHE342
|
3.8
|
0.0
|
1.0
|
C05
|
A:ZQU1305
|
3.8
|
64.3
|
1.0
|
C09
|
A:ZQU1304
|
3.8
|
65.1
|
1.0
|
C04
|
A:ZQU1304
|
3.9
|
65.1
|
1.0
|
C09
|
A:ZQU1305
|
3.9
|
64.3
|
1.0
|
CZ
|
A:PHE342
|
4.2
|
0.0
|
1.0
|
C10
|
A:ZQU1305
|
4.3
|
64.3
|
1.0
|
C02
|
A:ZQU1304
|
4.4
|
65.1
|
1.0
|
CB
|
A:PHE342
|
4.4
|
0.0
|
1.0
|
F01
|
A:ZQU1304
|
4.7
|
65.1
|
1.0
|
CD2
|
A:PHE342
|
4.7
|
0.0
|
1.0
|
CG2
|
A:ILE305
|
4.7
|
0.4
|
1.0
|
C07
|
A:ZQU1305
|
4.8
|
64.3
|
1.0
|
CE2
|
A:PHE342
|
4.9
|
0.0
|
1.0
|
C08
|
A:ZQU1305
|
5.0
|
64.3
|
1.0
|
C17
|
A:ZQU1304
|
5.0
|
65.1
|
1.0
|
|
Reference:
A.Alam,
R.Kung,
J.Kowal,
R.A.Mcleod,
N.Tremp,
E.V.Broude,
I.B.Roninson,
H.Stahlberg,
K.P.Locher.
Structure of A Zosuquidar and UIC2-Bound Human-Mouse Chimeric ABCB1. Proc. Natl. Acad. Sci. V. 115 E1973 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29440498
DOI: 10.1073/PNAS.1717044115
Page generated: Thu Aug 1 20:08:08 2024
|