Fluorine in PDB 6g0l: Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
(pdb code 6g0l). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the
Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome, PDB code: 6g0l:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
Fluorine binding site 1 out
of 6 in 6g0l
Go back to
Fluorine Binding Sites List in 6g0l
Fluorine binding site 1 out
of 6 in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:F1502
b:26.2
occ:1.00
|
F1
|
M:BEF1502
|
0.0
|
26.2
|
1.0
|
BE
|
M:BEF1502
|
1.6
|
30.6
|
1.0
|
F3
|
M:BEF1502
|
2.5
|
28.4
|
1.0
|
O2B
|
M:ADP1501
|
2.6
|
28.6
|
1.0
|
F2
|
M:BEF1502
|
2.6
|
38.3
|
1.0
|
NH1
|
M:ARG804
|
2.8
|
0.0
|
1.0
|
NH2
|
M:ARG807
|
2.8
|
0.0
|
1.0
|
PB
|
M:ADP1501
|
3.2
|
32.0
|
1.0
|
O3B
|
M:ADP1501
|
3.2
|
48.6
|
1.0
|
O3A
|
M:ADP1501
|
3.4
|
21.0
|
1.0
|
O
|
M:ILE778
|
3.8
|
0.0
|
1.0
|
CZ
|
M:ARG807
|
3.9
|
0.0
|
1.0
|
CZ
|
M:ARG804
|
4.0
|
0.0
|
1.0
|
NH1
|
M:ARG807
|
4.5
|
0.0
|
1.0
|
NH2
|
M:ARG804
|
4.7
|
0.0
|
1.0
|
O1B
|
M:ADP1501
|
4.7
|
27.7
|
1.0
|
C
|
M:ILE778
|
4.7
|
0.0
|
1.0
|
CD
|
M:ARG804
|
4.7
|
0.0
|
1.0
|
NE
|
M:ARG804
|
4.8
|
0.0
|
1.0
|
NE
|
M:ARG807
|
4.8
|
0.0
|
1.0
|
CB
|
M:MET403
|
4.8
|
30.0
|
1.0
|
O
|
M:ALA803
|
4.9
|
0.0
|
1.0
|
CB
|
M:ASN779
|
4.9
|
0.0
|
1.0
|
OE2
|
M:GLU514
|
5.0
|
0.0
|
1.0
|
PA
|
M:ADP1501
|
5.0
|
24.4
|
1.0
|
CD
|
M:ARG807
|
5.0
|
0.0
|
1.0
|
|
Fluorine binding site 2 out
of 6 in 6g0l
Go back to
Fluorine Binding Sites List in 6g0l
Fluorine binding site 2 out
of 6 in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:F1502
b:38.3
occ:1.00
|
F2
|
M:BEF1502
|
0.0
|
38.3
|
1.0
|
BE
|
M:BEF1502
|
1.6
|
30.6
|
1.0
|
CB
|
M:MET403
|
2.5
|
30.0
|
1.0
|
F3
|
M:BEF1502
|
2.6
|
28.4
|
1.0
|
F1
|
M:BEF1502
|
2.6
|
26.2
|
1.0
|
O2B
|
M:ADP1501
|
2.9
|
28.6
|
1.0
|
CA
|
M:MET403
|
3.2
|
0.0
|
1.0
|
NZ
|
M:LYS407
|
3.5
|
0.0
|
1.0
|
C
|
M:MET403
|
3.8
|
0.0
|
1.0
|
N
|
M:GLY404
|
4.0
|
0.0
|
1.0
|
NH1
|
M:ARG804
|
4.1
|
0.0
|
1.0
|
PB
|
M:ADP1501
|
4.3
|
32.0
|
1.0
|
OE2
|
M:GLU514
|
4.3
|
0.0
|
1.0
|
NH2
|
M:ARG807
|
4.4
|
0.0
|
1.0
|
O
|
M:MET403
|
4.5
|
0.0
|
1.0
|
N
|
M:MET403
|
4.5
|
0.0
|
1.0
|
CE
|
M:LYS407
|
4.6
|
0.0
|
1.0
|
O3B
|
M:ADP1501
|
4.7
|
48.6
|
1.0
|
CZ
|
M:ARG804
|
4.7
|
0.0
|
1.0
|
CB
|
M:ALA803
|
4.8
|
0.0
|
1.0
|
NH2
|
M:ARG804
|
5.0
|
0.0
|
1.0
|
|
Fluorine binding site 3 out
of 6 in 6g0l
Go back to
Fluorine Binding Sites List in 6g0l
Fluorine binding site 3 out
of 6 in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:F1502
b:28.4
occ:1.00
|
F3
|
M:BEF1502
|
0.0
|
28.4
|
1.0
|
BE
|
M:BEF1502
|
1.5
|
30.6
|
1.0
|
F1
|
M:BEF1502
|
2.5
|
26.2
|
1.0
|
OE2
|
M:GLU514
|
2.6
|
0.0
|
1.0
|
F2
|
M:BEF1502
|
2.6
|
38.3
|
1.0
|
O2B
|
M:ADP1501
|
2.9
|
28.6
|
1.0
|
NH1
|
M:ARG804
|
3.0
|
0.0
|
1.0
|
O3B
|
M:ADP1501
|
3.1
|
48.6
|
1.0
|
PB
|
M:ADP1501
|
3.6
|
32.0
|
1.0
|
CD
|
M:GLU514
|
3.7
|
0.0
|
1.0
|
NH2
|
M:ARG804
|
3.8
|
0.0
|
1.0
|
CZ
|
M:ARG804
|
3.8
|
0.0
|
1.0
|
OD2
|
M:ASP513
|
4.2
|
0.0
|
1.0
|
OD1
|
M:ASP513
|
4.3
|
0.0
|
1.0
|
NZ
|
M:LYS407
|
4.3
|
0.0
|
1.0
|
CG
|
M:GLU514
|
4.5
|
0.0
|
1.0
|
OE1
|
M:GLU514
|
4.6
|
0.0
|
1.0
|
O3A
|
M:ADP1501
|
4.7
|
21.0
|
1.0
|
O1B
|
M:ADP1501
|
4.7
|
27.7
|
1.0
|
CG
|
M:ASP513
|
4.7
|
0.0
|
1.0
|
CE
|
M:LYS407
|
4.9
|
0.0
|
1.0
|
|
Fluorine binding site 4 out
of 6 in 6g0l
Go back to
Fluorine Binding Sites List in 6g0l
Fluorine binding site 4 out
of 6 in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
W:F1501
b:98.6
occ:1.00
|
F1
|
W:BEF1501
|
0.0
|
98.6
|
1.0
|
BE
|
W:BEF1501
|
1.7
|
99.9
|
1.0
|
F2
|
W:BEF1501
|
2.9
|
86.8
|
1.0
|
F3
|
W:BEF1501
|
3.0
|
72.3
|
1.0
|
O2B
|
W:ADP1502
|
3.0
|
0.2
|
1.0
|
NH1
|
W:ARG804
|
3.2
|
0.0
|
1.0
|
PB
|
W:ADP1502
|
3.7
|
0.0
|
1.0
|
CZ
|
W:ARG804
|
3.9
|
0.0
|
1.0
|
O1B
|
W:ADP1502
|
3.9
|
0.0
|
1.0
|
O
|
W:ILE778
|
3.9
|
0.3
|
1.0
|
O3B
|
W:ADP1502
|
4.1
|
0.1
|
1.0
|
NH1
|
W:ARG807
|
4.2
|
0.0
|
1.0
|
NH2
|
W:ARG804
|
4.3
|
0.0
|
1.0
|
NH2
|
W:ARG807
|
4.4
|
0.0
|
1.0
|
NE
|
W:ARG804
|
4.5
|
0.0
|
1.0
|
N
|
W:ILE778
|
4.7
|
0.0
|
1.0
|
CZ
|
W:ARG807
|
4.8
|
0.0
|
1.0
|
C
|
W:ILE778
|
4.9
|
0.3
|
1.0
|
CA
|
W:GLY777
|
4.9
|
0.0
|
1.0
|
CG2
|
W:THR436
|
4.9
|
0.7
|
1.0
|
CD
|
W:ARG804
|
5.0
|
0.0
|
1.0
|
|
Fluorine binding site 5 out
of 6 in 6g0l
Go back to
Fluorine Binding Sites List in 6g0l
Fluorine binding site 5 out
of 6 in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
W:F1501
b:86.8
occ:1.00
|
F2
|
W:BEF1501
|
0.0
|
86.8
|
1.0
|
BE
|
W:BEF1501
|
1.8
|
99.9
|
1.0
|
O2B
|
W:ADP1502
|
2.6
|
0.2
|
1.0
|
F1
|
W:BEF1501
|
2.9
|
98.6
|
1.0
|
CG2
|
W:THR436
|
2.9
|
0.7
|
1.0
|
F3
|
W:BEF1501
|
3.3
|
72.3
|
1.0
|
PB
|
W:ADP1502
|
3.9
|
0.0
|
1.0
|
OD2
|
W:ASP513
|
4.1
|
0.2
|
1.0
|
OG1
|
W:THR408
|
4.2
|
0.2
|
1.0
|
CB
|
W:THR436
|
4.4
|
0.1
|
1.0
|
O1B
|
W:ADP1502
|
4.5
|
0.0
|
1.0
|
NE1
|
W:TRP440
|
4.5
|
0.7
|
1.0
|
OG1
|
W:THR436
|
4.6
|
77.6
|
1.0
|
O3A
|
W:ADP1502
|
4.7
|
0.4
|
1.0
|
CZ2
|
W:TRP440
|
4.7
|
0.9
|
1.0
|
OD1
|
W:ASP513
|
4.8
|
0.3
|
1.0
|
CE2
|
W:TRP440
|
4.8
|
1.0
|
1.0
|
OE2
|
W:GLU514
|
4.9
|
0.0
|
1.0
|
CG
|
W:ASP513
|
4.9
|
0.7
|
1.0
|
O3B
|
W:ADP1502
|
4.9
|
0.1
|
1.0
|
|
Fluorine binding site 6 out
of 6 in 6g0l
Go back to
Fluorine Binding Sites List in 6g0l
Fluorine binding site 6 out
of 6 in the Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Structure of Two Molecules of the Chromatin Remodelling Enzyme CHD1 Bound to A Nucleosome within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
W:F1501
b:72.3
occ:1.00
|
F3
|
W:BEF1501
|
0.0
|
72.3
|
1.0
|
BE
|
W:BEF1501
|
1.8
|
99.9
|
1.0
|
O2B
|
W:ADP1502
|
2.3
|
0.2
|
1.0
|
F1
|
W:BEF1501
|
3.0
|
98.6
|
1.0
|
O3B
|
W:ADP1502
|
3.2
|
0.1
|
1.0
|
F2
|
W:BEF1501
|
3.3
|
86.8
|
1.0
|
PB
|
W:ADP1502
|
3.3
|
0.0
|
1.0
|
CA
|
W:GLY404
|
4.2
|
0.3
|
1.0
|
O3A
|
W:ADP1502
|
4.3
|
0.4
|
1.0
|
N
|
W:GLY404
|
4.4
|
0.5
|
1.0
|
CE
|
W:LYS407
|
4.4
|
0.7
|
1.0
|
CB
|
W:LYS407
|
4.5
|
0.5
|
1.0
|
O1B
|
W:ADP1502
|
4.6
|
0.0
|
1.0
|
OG1
|
W:THR408
|
4.7
|
0.2
|
1.0
|
NH2
|
W:ARG807
|
4.7
|
0.0
|
1.0
|
O2A
|
W:ADP1502
|
4.9
|
0.4
|
1.0
|
|
Reference:
R.Sundaramoorthy,
A.L.Hughes,
H.El-Mkami,
D.G.Norman,
H.Ferreira,
T.Owen-Hughes.
Structure of the Chromatin Remodelling Enzyme CHD1 Bound to A Ubiquitinylated Nucleosome. Elife V. 7 2018.
ISSN: ESSN 2050-084X
PubMed: 30079888
DOI: 10.7554/ELIFE.35720
Page generated: Thu Aug 1 20:22:52 2024
|