Fluorine in PDB 6g2o: X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321

Enzymatic activity of X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321

All present enzymatic activity of X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321:
2.1.1.43;

Protein crystallography data

The structure of X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321, PDB code: 6g2o was solved by J.Boettcher, B.J.Muellauer, A.Weiss-Puxbaum, A.Zoephel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.71 / 1.81
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.279, 47.568, 61.113, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 22.4

Fluorine Binding Sites:

The binding sites of Fluorine atom in the X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321 (pdb code 6g2o). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321, PDB code: 6g2o:

Fluorine binding site 1 out of 1 in 6g2o

Go back to Fluorine Binding Sites List in 6g2o
Fluorine binding site 1 out of 1 in the X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:29.6
occ:1.00
F26 A:EJE401 0.0 29.6 1.0
C24 A:EJE401 1.4 30.0 1.0
C25 A:EJE401 2.3 28.1 1.0
C23 A:EJE401 2.3 29.6 1.0
OE1 A:GLN367 2.8 62.6 1.0
CD A:GLN367 3.3 65.5 1.0
CB A:GLN367 3.5 32.4 1.0
C22 A:EJE401 3.6 29.7 1.0
CH2 A:TRP284 3.6 26.6 1.0
C20 A:EJE401 3.6 26.7 1.0
CA A:GLU364 3.7 31.6 1.0
CG A:GLN367 3.8 46.3 1.0
CG A:GLU364 3.9 34.4 1.0
NE2 A:GLN367 3.9 52.9 1.0
O A:GLU364 4.1 32.4 1.0
O A:HOH573 4.1 51.7 1.0
C21 A:EJE401 4.1 26.1 1.0
CB A:GLU364 4.1 32.5 1.0
CZ2 A:TRP284 4.3 25.9 1.0
C A:GLU364 4.4 34.1 1.0
CZ3 A:TRP284 4.4 25.7 1.0
O A:ARG363 4.5 40.0 1.0
N A:GLU364 4.6 34.6 1.0
N15 A:EJE401 4.7 26.8 1.0
CA A:GLN367 4.9 30.3 1.0
C A:ARG363 4.9 41.2 1.0
OE1 A:GLN316 4.9 60.4 1.0

Reference:

J.Boettcher, B.J.Muellauer, A.Weiss-Puxbaum, A.Zoephel. X-Ray Structure of NSD3-PWWP1 in Complex with Compound Bi-9321 To Be Published.
Page generated: Sun Dec 13 12:50:55 2020

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