Fluorine in PDB 6g2w: Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation

Enzymatic activity of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation

All present enzymatic activity of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation:
3.6.4.6;

Protein crystallography data

The structure of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation, PDB code: 6g2w was solved by L.Stach, R.M.L.Morgan, P.S.Freemont, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.59 / 2.68
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 92.103, 92.103, 65.863, 90.00, 90.00, 120.00
R / Rfree (%) 23.7 / 32.4

Other elements in 6g2w:

The structure of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation also contains other interesting chemical elements:

Sodium (Na) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation (pdb code 6g2w). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation, PDB code: 6g2w:

Fluorine binding site 1 out of 1 in 6g2w

Go back to Fluorine Binding Sites List in 6g2w
Fluorine binding site 1 out of 1 in the Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F809

b:57.4
occ:1.00
 F1 A:AWD809 0.0 57.4 1.0
C10 A:AWD809 1.4 51.0 1.0
C11 A:AWD809 2.4 50.0 1.0
C9 A:AWD809 2.4 50.5 1.0
C A:LYS754 3.1 50.6 1.0
O A:LYS754 3.2 47.4 1.0
N A:TYR755 3.2 53.0 1.0
CA A:TYR755 3.5 55.4 1.0
CB A:LYS754 3.5 50.6 1.0
CD1 A:TYR755 3.5 46.7 1.0
C12 A:AWD809 3.6 57.2 1.0
C8 A:AWD809 3.7 53.3 1.0
CG A:PRO626 3.8 52.6 1.0
CG A:TYR755 3.9 49.5 1.0
CA A:LYS754 3.9 54.6 1.0
CE1 A:TYR755 4.0 40.9 1.0
CD A:PRO626 4.0 56.4 1.0
C7 A:AWD809 4.1 57.5 1.0
CB A:TYR755 4.2 53.1 1.0
CB A:PHE758 4.3 54.2 1.0
CD2 A:TYR755 4.6 47.0 1.0
CZ A:TYR755 4.7 47.0 1.0
C A:TYR755 4.7 49.7 1.0
CG A:LYS754 4.8 54.3 1.0
O A:ASP751 4.9 50.1 1.0
CG A:PHE758 4.9 51.9 1.0
CD2 A:PHE758 4.9 55.9 1.0
CE2 A:TYR755 5.0 49.1 1.0

Reference:

L.Stach, R.M.L.Morgan, L.Makhlouf, A.Douangamath, F.Von Delft, P.S.Freemont. Crystal Structure of the P97 D2 Domain in A Helical Split-Washer Conformation To Be Published.
Page generated: Sun Dec 13 12:50:57 2020

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