Fluorine in PDB 6i2y: Human STK10 Bound to Foretinib
Enzymatic activity of Human STK10 Bound to Foretinib
All present enzymatic activity of Human STK10 Bound to Foretinib:
2.7.11.1;
Protein crystallography data
The structure of Human STK10 Bound to Foretinib, PDB code: 6i2y
was solved by
F.J.Sorrell,
B.-T.Berger,
S.Oerum,
F.Von Delft,
C.Bountra,
C.Arrowsmith,
A.M.Edwards,
S.Knapp,
J.M.Elkins,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
54.50 /
2.56
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
50.930,
95.330,
132.860,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
26.3 /
28.3
|
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Human STK10 Bound to Foretinib
(pdb code 6i2y). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Human STK10 Bound to Foretinib, PDB code: 6i2y:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 6i2y
Go back to
Fluorine Binding Sites List in 6i2y
Fluorine binding site 1 out
of 4 in the Human STK10 Bound to Foretinib
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Human STK10 Bound to Foretinib within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2000
b:77.9
occ:1.00
|
F21
|
A:88Z2000
|
0.0
|
77.9
|
1.0
|
C20
|
A:88Z2000
|
1.4
|
69.1
|
1.0
|
C15
|
A:88Z2000
|
2.3
|
73.0
|
1.0
|
C19
|
A:88Z2000
|
2.4
|
60.7
|
1.0
|
O14
|
A:88Z2000
|
2.8
|
72.0
|
1.0
|
CG1
|
A:VAL50
|
3.5
|
63.7
|
1.0
|
C10
|
A:88Z2000
|
3.6
|
69.1
|
1.0
|
C16
|
A:88Z2000
|
3.6
|
74.6
|
1.0
|
C18
|
A:88Z2000
|
3.6
|
67.5
|
1.0
|
CB
|
A:LYS65
|
3.7
|
77.6
|
1.0
|
CG
|
A:LYS65
|
3.9
|
82.5
|
1.0
|
C9
|
A:88Z2000
|
4.0
|
63.1
|
1.0
|
C17
|
A:88Z2000
|
4.1
|
68.4
|
1.0
|
CB
|
A:ALA63
|
4.2
|
71.2
|
1.0
|
CG2
|
A:VAL50
|
4.3
|
73.6
|
1.0
|
N
|
A:LYS65
|
4.4
|
72.5
|
1.0
|
CE1
|
A:PHE176
|
4.4
|
84.0
|
1.0
|
CA
|
A:LYS65
|
4.4
|
74.1
|
1.0
|
CB
|
A:VAL50
|
4.6
|
73.1
|
1.0
|
C5
|
A:88Z2000
|
4.6
|
65.1
|
1.0
|
CD1
|
A:ILE110
|
4.7
|
81.5
|
1.0
|
C
|
A:ALA64
|
4.8
|
75.2
|
1.0
|
CD
|
A:LYS65
|
4.8
|
83.8
|
1.0
|
O
|
A:ALA63
|
4.8
|
74.8
|
1.0
|
C
|
A:ALA63
|
4.8
|
72.9
|
1.0
|
N22
|
A:88Z2000
|
4.8
|
70.6
|
1.0
|
O36
|
A:88Z2000
|
5.0
|
79.8
|
1.0
|
CZ
|
A:PHE176
|
5.0
|
82.3
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 6i2y
Go back to
Fluorine Binding Sites List in 6i2y
Fluorine binding site 2 out
of 4 in the Human STK10 Bound to Foretinib
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Human STK10 Bound to Foretinib within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2000
b:87.1
occ:1.00
|
F44
|
A:88Z2000
|
0.0
|
87.1
|
1.0
|
C41
|
A:88Z2000
|
1.4
|
75.4
|
1.0
|
C40
|
A:88Z2000
|
2.3
|
72.9
|
1.0
|
C42
|
A:88Z2000
|
2.3
|
64.4
|
1.0
|
CD2
|
A:HIS155
|
3.4
|
64.2
|
1.0
|
CD1
|
A:LEU148
|
3.6
|
66.0
|
1.0
|
C39
|
A:88Z2000
|
3.6
|
68.9
|
1.0
|
C43
|
A:88Z2000
|
3.6
|
62.8
|
1.0
|
NE2
|
A:HIS155
|
3.9
|
60.6
|
1.0
|
C38
|
A:88Z2000
|
4.1
|
64.6
|
1.0
|
CD2
|
A:LEU148
|
4.2
|
62.1
|
1.0
|
CD2
|
A:LEU173
|
4.2
|
65.5
|
1.0
|
CG
|
A:LEU148
|
4.5
|
65.0
|
1.0
|
CG2
|
A:ILE93
|
4.5
|
65.1
|
1.0
|
CG
|
A:LEU173
|
4.6
|
67.6
|
1.0
|
CG
|
A:HIS155
|
4.6
|
61.0
|
1.0
|
CD1
|
A:ILE93
|
4.9
|
65.4
|
1.0
|
CB
|
A:LEU173
|
5.0
|
58.1
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 6i2y
Go back to
Fluorine Binding Sites List in 6i2y
Fluorine binding site 3 out
of 4 in the Human STK10 Bound to Foretinib
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Human STK10 Bound to Foretinib within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F2000
b:93.3
occ:1.00
|
F21
|
B:88Z2000
|
0.0
|
93.3
|
1.0
|
C20
|
B:88Z2000
|
1.4
|
85.8
|
1.0
|
C15
|
B:88Z2000
|
2.3
|
84.7
|
1.0
|
C19
|
B:88Z2000
|
2.4
|
79.5
|
1.0
|
O14
|
B:88Z2000
|
2.8
|
86.7
|
1.0
|
CG2
|
B:VAL50
|
3.3
|
0.3
|
1.0
|
C10
|
B:88Z2000
|
3.5
|
87.9
|
1.0
|
C16
|
B:88Z2000
|
3.6
|
80.5
|
1.0
|
C18
|
B:88Z2000
|
3.6
|
79.1
|
1.0
|
CB
|
B:LYS65
|
3.8
|
0.8
|
1.0
|
C9
|
B:88Z2000
|
3.9
|
87.6
|
1.0
|
CB
|
B:ALA63
|
3.9
|
97.7
|
1.0
|
C17
|
B:88Z2000
|
4.1
|
79.8
|
1.0
|
CB
|
B:VAL50
|
4.3
|
0.8
|
1.0
|
N
|
B:LYS65
|
4.4
|
97.9
|
1.0
|
CA
|
B:LYS65
|
4.4
|
0.5
|
1.0
|
C5
|
B:88Z2000
|
4.6
|
88.6
|
1.0
|
CG1
|
B:ILE110
|
4.6
|
88.7
|
1.0
|
C
|
B:ALA63
|
4.6
|
98.4
|
1.0
|
O
|
B:ALA63
|
4.6
|
98.5
|
1.0
|
CB
|
B:ILE110
|
4.7
|
88.2
|
1.0
|
C
|
B:ALA64
|
4.7
|
99.0
|
1.0
|
CE1
|
B:PHE176
|
4.7
|
93.9
|
1.0
|
N22
|
B:88Z2000
|
4.8
|
77.7
|
1.0
|
N
|
B:ALA64
|
4.9
|
98.4
|
1.0
|
CA
|
B:ALA63
|
4.9
|
98.5
|
1.0
|
O
|
B:ALA64
|
5.0
|
86.9
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 6i2y
Go back to
Fluorine Binding Sites List in 6i2y
Fluorine binding site 4 out
of 4 in the Human STK10 Bound to Foretinib
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Human STK10 Bound to Foretinib within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F2000
b:0.7
occ:1.00
|
F44
|
B:88Z2000
|
0.0
|
0.7
|
1.0
|
C41
|
B:88Z2000
|
1.4
|
97.6
|
1.0
|
C40
|
B:88Z2000
|
2.3
|
94.8
|
1.0
|
C42
|
B:88Z2000
|
2.3
|
93.2
|
1.0
|
CD1
|
B:LEU148
|
3.5
|
76.7
|
1.0
|
CD2
|
B:HIS155
|
3.5
|
93.3
|
1.0
|
C43
|
B:88Z2000
|
3.6
|
90.3
|
1.0
|
C39
|
B:88Z2000
|
3.6
|
93.8
|
1.0
|
C38
|
B:88Z2000
|
4.1
|
89.7
|
1.0
|
NE2
|
B:HIS155
|
4.1
|
92.5
|
1.0
|
CD1
|
B:ILE93
|
4.1
|
72.3
|
1.0
|
CD2
|
B:LEU173
|
4.2
|
90.3
|
1.0
|
CG2
|
B:ILE93
|
4.3
|
66.3
|
1.0
|
CD2
|
B:LEU148
|
4.4
|
70.5
|
1.0
|
CG
|
B:LEU173
|
4.5
|
90.2
|
1.0
|
CG
|
B:LEU148
|
4.5
|
74.7
|
1.0
|
CG
|
B:HIS155
|
4.8
|
90.2
|
1.0
|
CB
|
B:LEU173
|
4.8
|
85.7
|
1.0
|
O
|
B:LEU173
|
4.8
|
84.4
|
1.0
|
C
|
B:LEU173
|
5.0
|
87.3
|
1.0
|
|
Reference:
F.J.Sorrell,
J.M.Elkins.
Human STK10 Bound to GW683134 To Be Published.
Page generated: Thu Aug 1 21:21:30 2024
|