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Fluorine in PDB 6m07: Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Enzymatic activity of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
All present enzymatic activity of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor:
3.1.1.47;
3.1.1.47;
Protein crystallography data
The structure of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor, PDB code: 6m07
was solved by
H.C.Hu,
Y.C.Xu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 44.95 / 2.64 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 112.687, 77.857, 94.698, 90, 115.32, 90 |
| R / Rfree (%) | 20 / 24.9 |
Fluorine Binding Sites:
Pages:
>>> Page 1 <<< Page 2, Binding sites: 11 - 12;Binding sites:
The binding sites of Fluorine atom in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor (pdb code 6m07). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.In total 12 binding sites of Fluorine where determined in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor, PDB code: 6m07:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
Fluorine binding site 1 out of 12 in 6m07
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Fluorine Binding Sites List in 6m07
Fluorine binding site 1 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 2 out of 12 in 6m07
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Fluorine Binding Sites List in 6m07
Fluorine binding site 2 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 3 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 3 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 4 out of 12 in 6m07
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Fluorine Binding Sites List in 6m07
Fluorine binding site 4 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 5 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 5 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 6 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 6 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 7 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 7 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 8 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 8 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 9 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 9 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Fluorine binding site 10 out of 12 in 6m07
Go back to
Fluorine Binding Sites List in 6m07
Fluorine binding site 10 out
of 12 in the Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Crystal Structure of Lp-PLA2 in Complex with A Novel Covalent Inhibitor within 5.0Å range:
|
Reference:
F.Huang,
H.Hu,
K.Wang,
C.Peng,
W.Xu,
Y.Zhang,
J.Gao,
Y.Liu,
H.Zhou,
R.Huang,
M.Li,
J.Shen,
Y.Xu.
Identification of Highly Selective Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Inhibitors By A Covalent Fragment-Based Approach. J.Med.Chem. V. 63 7052 2020.
ISSN: ISSN 0022-2623
PubMed: 32459096
DOI: 10.1021/ACS.JMEDCHEM.0C00372
Page generated: Tue Jul 15 13:03:12 2025
ISSN: ISSN 0022-2623
PubMed: 32459096
DOI: 10.1021/ACS.JMEDCHEM.0C00372
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