Fluorine in PDB 6njm: Structure of A Complex

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>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Fluorine atom in the Structure of A Complex (pdb code 6njm). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 12 binding sites of Fluorine where determined in the Structure of A Complex, PDB code: 6njm:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:F901 b:0.9 occ:1.00 FAF A:ZK1901 0.0 0.9 1.0 CAZ A:ZK1901 1.4 0.9 1.0 FAG A:ZK1901 2.2 0.9 1.0 FAH A:ZK1901 2.2 0.9 1.0 CAS A:ZK1901 2.4 0.9 1.0 OH A:TYR732 2.9 0.2 1.0 CAR A:ZK1901 3.1 0.9 1.0 CAM A:ZK1901 3.3 0.9 1.0 NAX A:ZK1901 3.3 0.9 1.0 CAJ A:ZK1901 3.3 0.9 1.0 CZ A:TYR732 3.7 0.5 1.0 CE2 A:TYR732 4.1 0.1 1.0 CAN A:ZK1901 4.3 0.9 1.0 CAI A:ZK1901 4.4 0.9 1.0 CAV A:ZK1901 4.5 0.9 1.0 OG1 A:THR707 4.6 0.5 1.0 CAK A:ZK1901 4.7 0.9 1.0 CE2 A:TYR405 4.7 0.4 1.0 CE1 A:TYR732 4.8 0.5 1.0 OH A:TYR405 4.9 0.4 1.0 CB A:PRO478 4.9 0.0 1.0 CAW A:ZK1901 5.0 0.9 1.0

Fluorine binding site 2 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:F901 b:0.9 occ:1.00 FAG A:ZK1901 0.0 0.9 1.0 CAZ A:ZK1901 1.4 0.9 1.0 FAH A:ZK1901 2.2 0.9 1.0 FAF A:ZK1901 2.2 0.9 1.0 CAS A:ZK1901 2.3 0.9 1.0 CAJ A:ZK1901 2.6 0.9 1.0 CB A:PRO478 3.2 0.0 1.0 O A:PRO478 3.3 0.6 1.0 OH A:TYR732 3.5 0.2 1.0 CAR A:ZK1901 3.7 0.9 1.0 CZ A:TYR732 3.8 0.5 1.0 CAV A:ZK1901 4.0 0.9 1.0 CG A:PRO478 4.1 0.8 1.0 C A:PRO478 4.2 0.7 1.0 CE1 A:TYR732 4.3 0.5 1.0 CA A:PRO478 4.3 0.0 1.0 NAX A:ZK1901 4.3 0.9 1.0 CE2 A:TYR732 4.4 0.1 1.0 CE2 A:TYR405 4.4 0.4 1.0 CAI A:ZK1901 4.7 0.9 1.0 NAP A:ZK1901 4.8 0.9 1.0 CD A:PRO478 4.9 0.8 1.0 CD2 A:TYR405 4.9 0.6 1.0 CAW A:ZK1901 4.9 0.9 1.0 CAM A:ZK1901 4.9 0.9 1.0

Fluorine binding site 3 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:F901 b:0.9 occ:1.00 FAH A:ZK1901 0.0 0.9 1.0 CAZ A:ZK1901 1.4 0.9 1.0 FAG A:ZK1901 2.2 0.9 1.0 FAF A:ZK1901 2.2 0.9 1.0 CAS A:ZK1901 2.4 0.9 1.0 NAX A:ZK1901 2.9 0.9 1.0 CAR A:ZK1901 3.0 0.9 1.0 CAN A:ZK1901 3.2 0.9 1.0 CAJ A:ZK1901 3.5 0.9 1.0 CAM A:ZK1901 3.7 0.9 1.0 OE1 A:GLU402 3.9 0.4 1.0 CAI A:ZK1901 4.3 0.9 1.0 CD A:GLU402 4.4 0.5 1.0 CG A:GLU402 4.5 0.5 1.0 OH A:TYR450 4.5 0.8 1.0 CAL A:ZK1901 4.5 0.9 1.0 CE2 A:TYR405 4.6 0.4 1.0 CAV A:ZK1901 4.7 0.9 1.0 OH A:TYR732 4.8 0.2 1.0 CB A:GLU402 4.8 0.9 1.0 OAQ A:ZK1901 4.8 0.9 1.0 CAK A:ZK1901 4.9 0.9 1.0 CD2 A:TYR405 5.0 0.6 1.0

Fluorine binding site 4 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:F901 b:0.1 occ:1.00 FAF B:ZK1901 0.0 0.1 1.0 CAZ B:ZK1901 1.4 0.1 1.0 FAG B:ZK1901 2.2 0.1 1.0 FAH B:ZK1901 2.2 0.1 1.0 CAS B:ZK1901 2.4 0.1 1.0 CAR B:ZK1901 3.0 0.1 1.0 NAX B:ZK1901 3.1 0.1 1.0 CAM B:ZK1901 3.2 0.1 1.0 CAJ B:ZK1901 3.4 0.1 1.0 OH B:TYR732 3.7 0.4 1.0 OAQ B:ZK1901 3.7 0.1 1.0 CAK B:ZK1901 3.8 0.1 1.0 CAN B:ZK1901 3.9 0.1 1.0 CAI B:ZK1901 4.3 0.1 1.0 CAL B:ZK1901 4.3 0.1 1.0 CZ B:TYR732 4.6 0.8 1.0 CAV B:ZK1901 4.7 0.1 1.0 CB B:MET708 4.8 0.0 1.0 CE2 B:TYR732 5.0 0.8 1.0

Fluorine binding site 5 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:F901 b:0.1 occ:1.00 FAG B:ZK1901 0.0 0.1 1.0 CAZ B:ZK1901 1.4 0.1 1.0 FAF B:ZK1901 2.2 0.1 1.0 FAH B:ZK1901 2.2 0.1 1.0 CAS B:ZK1901 2.4 0.1 1.0 CAJ B:ZK1901 2.6 0.1 1.0 CB B:PRO478 3.3 0.7 1.0 OH B:TYR732 3.5 0.4 1.0 O B:PRO478 3.6 0.2 1.0 CAR B:ZK1901 3.7 0.1 1.0 CZ B:TYR732 3.9 0.8 1.0 CAV B:ZK1901 4.0 0.1 1.0 CG B:PRO478 4.1 0.3 1.0 CE2 B:TYR732 4.4 0.8 1.0 NAX B:ZK1901 4.4 0.1 1.0 C B:PRO478 4.4 0.6 1.0 CE1 B:TYR732 4.4 0.5 1.0 CA B:PRO478 4.5 0.9 1.0 CAI B:ZK1901 4.8 0.1 1.0 NAP B:ZK1901 4.8 0.1 1.0 OH B:TYR450 4.8 0.4 1.0 CAW B:ZK1901 4.9 0.1 1.0 CE2 B:TYR405 5.0 0.4 1.0 CD B:PRO478 5.0 0.5 1.0 CAN B:ZK1901 5.0 0.1 1.0

Fluorine binding site 6 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:F901 b:0.1 occ:1.00 FAH B:ZK1901 0.0 0.1 1.0 CAZ B:ZK1901 1.4 0.1 1.0 FAG B:ZK1901 2.2 0.1 1.0 FAF B:ZK1901 2.2 0.1 1.0 CAS B:ZK1901 2.4 0.1 1.0 CAR B:ZK1901 3.1 0.1 1.0 NAX B:ZK1901 3.2 0.1 1.0 CAN B:ZK1901 3.2 0.1 1.0 CAJ B:ZK1901 3.4 0.1 1.0 OH B:TYR450 3.5 0.4 1.0 OE1 B:GLU402 3.6 0.9 1.0 CAL B:ZK1901 3.9 0.1 1.0 OAQ B:ZK1901 3.9 0.1 1.0 CD B:GLU402 3.9 1.0 1.0 CAM B:ZK1901 4.1 0.1 1.0 CG B:GLU402 4.2 0.2 1.0 CZ B:TYR450 4.3 0.5 1.0 CAI B:ZK1901 4.4 0.1 1.0 CE2 B:TYR450 4.5 0.9 1.0 CAK B:ZK1901 4.6 0.1 1.0 OE2 B:GLU402 4.6 0.4 1.0 CAV B:ZK1901 4.6 0.1 1.0 CB B:GLU402 4.8 0.5 1.0 CAW B:ZK1901 5.0 0.1 1.0

Fluorine binding site 7 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:F901 b:0.9 occ:1.00 FAF C:ZK1901 0.0 0.9 1.0 CAZ C:ZK1901 1.4 0.9 1.0 FAG C:ZK1901 2.2 0.9 1.0 FAH C:ZK1901 2.2 0.9 1.0 CAS C:ZK1901 2.4 0.9 1.0 OH C:TYR732 2.9 0.2 1.0 CAR C:ZK1901 3.1 0.9 1.0 CAM C:ZK1901 3.3 0.9 1.0 NAX C:ZK1901 3.3 0.9 1.0 CAJ C:ZK1901 3.3 0.9 1.0 CZ C:TYR732 3.8 0.5 1.0 CE2 C:TYR732 4.1 0.1 1.0 CAN C:ZK1901 4.3 0.9 1.0 CAI C:ZK1901 4.4 0.9 1.0 CAV C:ZK1901 4.5 0.9 1.0 OG1 C:THR707 4.6 0.5 1.0 CE2 C:TYR405 4.7 0.4 1.0 CAK C:ZK1901 4.7 0.9 1.0 CE1 C:TYR732 4.8 0.5 1.0 OH C:TYR405 4.9 0.4 1.0 CB C:PRO478 4.9 0.0 1.0 CAW C:ZK1901 5.0 0.9 1.0

Fluorine binding site 8 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:F901 b:0.9 occ:1.00 FAG C:ZK1901 0.0 0.9 1.0 CAZ C:ZK1901 1.4 0.9 1.0 FAH C:ZK1901 2.2 0.9 1.0 FAF C:ZK1901 2.2 0.9 1.0 CAS C:ZK1901 2.3 0.9 1.0 CAJ C:ZK1901 2.6 0.9 1.0 CB C:PRO478 3.2 0.0 1.0 O C:PRO478 3.3 0.6 1.0 OH C:TYR732 3.5 0.2 1.0 CAR C:ZK1901 3.7 0.9 1.0 CZ C:TYR732 3.9 0.5 1.0 CAV C:ZK1901 4.0 0.9 1.0 CG C:PRO478 4.0 0.8 1.0 C C:PRO478 4.2 0.7 1.0 CE1 C:TYR732 4.3 0.5 1.0 CA C:PRO478 4.3 0.0 1.0 NAX C:ZK1901 4.3 0.9 1.0 CE2 C:TYR405 4.4 0.4 1.0 CE2 C:TYR732 4.5 0.1 1.0 CAI C:ZK1901 4.7 0.9 1.0 NAP C:ZK1901 4.8 0.9 1.0 CD2 C:TYR405 4.8 0.6 1.0 CD C:PRO478 4.9 0.8 1.0 CAW C:ZK1901 4.9 0.9 1.0 CAM C:ZK1901 4.9 0.9 1.0 CZ C:TYR405 5.0 0.3 1.0

Fluorine binding site 9 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:F901 b:0.9 occ:1.00 FAH C:ZK1901 0.0 0.9 1.0 CAZ C:ZK1901 1.4 0.9 1.0 FAG C:ZK1901 2.2 0.9 1.0 FAF C:ZK1901 2.2 0.9 1.0 CAS C:ZK1901 2.4 0.9 1.0 NAX C:ZK1901 2.9 0.9 1.0 CAR C:ZK1901 3.0 0.9 1.0 CAN C:ZK1901 3.2 0.9 1.0 CAJ C:ZK1901 3.5 0.9 1.0 CAM C:ZK1901 3.7 0.9 1.0 OE1 C:GLU402 3.9 0.4 1.0 CAI C:ZK1901 4.3 0.9 1.0 CD C:GLU402 4.4 0.5 1.0 CG C:GLU402 4.5 0.5 1.0 OH C:TYR450 4.5 0.8 1.0 CAL C:ZK1901 4.6 0.9 1.0 CE2 C:TYR405 4.6 0.4 1.0 CAV C:ZK1901 4.7 0.9 1.0 CB C:GLU402 4.8 0.9 1.0 OH C:TYR732 4.8 0.2 1.0 OAQ C:ZK1901 4.8 0.9 1.0 CAK C:ZK1901 4.9 0.9 1.0 CD2 C:TYR405 5.0 0.6 1.0

Fluorine binding site 10 out of 12 in the Structure of A Complex


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Structure of A Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:F901 b:0.1 occ:1.00 FAF D:ZK1901 0.0 0.1 1.0 CAZ D:ZK1901 1.4 0.1 1.0 FAG D:ZK1901 2.2 0.1 1.0 FAH D:ZK1901 2.2 0.1 1.0 CAS D:ZK1901 2.4 0.1 1.0 CAR D:ZK1901 3.0 0.1 1.0 NAX D:ZK1901 3.1 0.1 1.0 CAM D:ZK1901 3.2 0.1 1.0 CAJ D:ZK1901 3.4 0.1 1.0 OAQ D:ZK1901 3.7 0.1 1.0 OH D:TYR732 3.7 0.4 1.0 CAK D:ZK1901 3.8 0.1 1.0 CAN D:ZK1901 3.9 0.1 1.0 CAI D:ZK1901 4.3 0.1 1.0 CAL D:ZK1901 4.3 0.1 1.0 CZ D:TYR732 4.6 0.8 1.0 CAV D:ZK1901 4.6 0.1 1.0 CB D:MET708 4.8 0.0 1.0 CE2 D:TYR732 5.0 0.8 1.0

Y.Zhao, S.Chen, A.C.Swensen, W.J.Qian, E.Gouaux. Architecture and Subunit Arrangement of Native Ampa Receptors Elucidated By Cryo-Em. Science V. 364 355 2019.
ISSN: ESSN 1095-9203
PubMed: 30975770
DOI: 10.1126/SCIENCE.AAW8250