Atomistry » Fluorine » PDB 6no9-6oab » 6o1h
Atomistry »
  Fluorine »
    PDB 6no9-6oab »
      6o1h »

Fluorine in PDB 6o1h: Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site

Enzymatic activity of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site

All present enzymatic activity of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site:
4.2.1.20;

Protein crystallography data

The structure of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site, PDB code: 6o1h was solved by E.Hilario, M.F.Dunn, L.J.Mueller, L.Fan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.31 / 1.64
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 183.749, 60.720, 67.210, 90.00, 94.63, 90.00
R / Rfree (%) 15.4 / 19.9

Other elements in 6o1h:

The structure of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site also contains other interesting chemical elements:

Caesium (Cs) 5 atoms
Chlorine (Cl) 24 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site (pdb code 6o1h). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site, PDB code: 6o1h:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 6o1h

Go back to Fluorine Binding Sites List in 6o1h
Fluorine binding site 1 out of 3 in the Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F403

b:27.9
occ:1.00
F9F A:F9F403 0.0 27.9 1.0
C8 A:F9F403 1.3 28.0 1.0
F10 A:F9F403 2.1 27.2 1.0
F11 A:F9F403 2.1 28.7 1.0
O7 A:F9F403 2.2 27.6 1.0
C1 A:F9F403 2.9 27.2 1.0
C6 A:F9F403 2.9 26.4 1.0
O A:HOH700 3.1 29.2 1.0
CD1 A:ILE153 3.5 29.2 1.0
O B:HOH712 3.6 27.4 1.0
CZ A:PHE212 3.7 26.3 1.0
O A:HOH576 4.0 25.6 1.0
CG1 A:ILE153 4.0 29.5 1.0
CE1 A:PHE212 4.0 27.3 1.0
CD2 A:LEU177 4.1 30.2 1.0
C2 A:F9F403 4.1 26.7 1.0
C5 A:F9F403 4.2 27.2 1.0
CG A:LEU177 4.4 31.4 1.0
CD1 A:LEU177 4.4 29.9 1.0
CG2 A:ILE153 4.4 27.7 1.0
CE2 A:PHE212 4.6 27.5 1.0
CB A:ILE153 4.8 27.6 1.0

Fluorine binding site 2 out of 3 in 6o1h

Go back to Fluorine Binding Sites List in 6o1h
Fluorine binding site 2 out of 3 in the Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F403

b:27.2
occ:1.00
F10 A:F9F403 0.0 27.2 1.0
C8 A:F9F403 1.3 28.0 1.0
F11 A:F9F403 2.1 28.7 1.0
F9F A:F9F403 2.1 27.9 1.0
O7 A:F9F403 2.1 27.6 1.0
O A:HOH576 3.0 25.6 1.0
O A:HOH700 3.1 29.2 1.0
O A:ALA129 3.2 22.5 1.0
O B:HOH712 3.4 27.4 1.0
CB B:PRO18 3.4 24.6 1.0
C1 A:F9F403 3.5 27.2 1.0
CB A:ALA59 3.9 24.3 1.0
CG B:PRO18 4.0 24.0 1.0
C A:ALA129 4.0 21.8 1.0
CB A:ALA129 4.0 23.6 1.0
CA A:ALA129 4.1 23.0 1.0
CA B:PRO18 4.1 24.1 1.0
C6 A:F9F403 4.2 26.4 1.0
O A:HOH605 4.2 30.8 1.0
C2 A:F9F403 4.5 26.7 1.0
CZ A:PHE212 4.8 26.3 1.0
CG1 A:ILE153 4.9 29.5 1.0
N B:GLN19 4.9 24.0 1.0
CD1 A:ILE153 4.9 29.2 1.0
C B:PRO18 5.0 23.1 1.0

Fluorine binding site 3 out of 3 in 6o1h

Go back to Fluorine Binding Sites List in 6o1h
Fluorine binding site 3 out of 3 in the Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Tryptophan Synthase Q114A Mutant in Complex with N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site, Cesium Ion at the Metal Coordination Site, and 2-Aminophenol Quinonoid at the Enzyme Beta Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F403

b:28.7
occ:1.00
F11 A:F9F403 0.0 28.7 1.0
C8 A:F9F403 1.3 28.0 1.0
F10 A:F9F403 2.1 27.2 1.0
F9F A:F9F403 2.1 27.9 1.0
O7 A:F9F403 2.2 27.6 1.0
C1 A:F9F403 2.9 27.2 1.0
C6 A:F9F403 2.9 26.4 1.0
O A:HOH576 3.2 25.6 1.0
CA A:ALA129 3.4 23.0 1.0
CD1 A:ILE153 3.5 29.2 1.0
CD2 A:LEU127 3.5 24.6 1.0
O A:ALA129 3.6 22.5 1.0
CB A:ALA129 3.6 23.6 1.0
CG1 A:ILE153 3.6 29.5 1.0
C A:ALA129 4.0 21.8 1.0
C2 A:F9F403 4.1 26.7 1.0
C5 A:F9F403 4.2 27.2 1.0
N A:ALA129 4.5 23.3 1.0
O B:HOH712 4.5 27.4 1.0
O A:HOH563 4.5 30.6 1.0
CG A:LEU127 4.7 24.9 1.0
CD1 A:LEU127 4.7 24.7 1.0
O A:HOH700 4.8 29.2 1.0
CB A:ILE153 4.9 27.6 1.0
O A:VAL128 4.9 22.1 1.0

Reference:

E.Hilario, M.F.Dunn, L.J.Mueller, L.Fan. Crystal Structure of Salmonella Typhimurium Tryptophan Synthase Mutant Beta-Q114A with 2-({[4-(Trifluoromethoxy)Phenyl]Sulfonyl}Amino)Ethyl Dihydrogen Phosphate (F9F) at the Alpha-Site, Cesium Ion at the Metal Coordination Site, and [3-Hydroxy-2-Methyl-5-Phosphonooxymethyl-Pyridin-4-Ylmethyl] -Serine (Pls) at the Beta-Site. To Be Published.
Page generated: Thu Aug 1 23:17:48 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy