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Fluorine in PDB 6pc6: E. Coli 50S Ribosome Bound to Compound 47

Fluorine Binding Sites:

The binding sites of Fluorine atom in the E. Coli 50S Ribosome Bound to Compound 47 (pdb code 6pc6). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the E. Coli 50S Ribosome Bound to Compound 47, PDB code: 6pc6:

Fluorine binding site 1 out of 1 in 6pc6

Go back to Fluorine Binding Sites List in 6pc6
Fluorine binding site 1 out of 1 in the E. Coli 50S Ribosome Bound to Compound 47


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of E. Coli 50S Ribosome Bound to Compound 47 within 5.0Å range:
probe atom residue distance (Å) B Occ
I:F3001

b:60.5
occ:1.00
F13 I:O7S3001 0.0 60.5 1.0
C12 I:O7S3001 1.3 60.5 1.0
C11 I:O7S3001 2.4 60.5 1.0
C14 I:O7S3001 2.4 60.5 1.0
C10 I:O7S3001 3.0 60.5 1.0
C15 I:O7S3001 3.1 60.5 1.0
C4' I:G2505 3.5 60.8 1.0
N16 I:O7S3001 3.5 60.5 1.0
C08 I:O7S3001 3.6 60.5 1.0
C09 I:O7S3001 3.8 60.5 1.0
C5' I:G2505 3.8 60.8 1.0
O5' I:G2505 3.8 60.8 1.0
C07 I:O7S3001 4.0 60.5 1.0
O3' I:G2505 4.1 60.8 1.0
O19 I:O7S3001 4.1 60.5 1.0
N3 I:PSU2504 4.2 59.0 1.0
O20 I:O7S3001 4.2 60.5 1.0
C4 I:PSU2504 4.3 59.0 1.0
C3' I:G2505 4.3 60.8 1.0
O2' I:G2505 4.4 60.8 1.0
O4' I:G2505 4.4 60.8 1.0
O2 I:C2452 4.4 59.4 1.0
O4 I:PSU2504 4.5 59.0 1.0
C2 I:PSU2504 4.6 59.0 1.0
C17 I:O7S3001 4.6 60.5 1.0
C37 I:O7S3001 4.7 60.5 1.0
C5 I:PSU2504 4.7 59.0 1.0
C2' I:PSU2504 4.8 59.0 1.0
N3 I:C2452 4.8 59.4 1.0
C2 I:C2452 4.9 59.4 1.0
C2' I:G2505 4.9 60.8 1.0
C18 I:O7S3001 4.9 60.5 1.0
N1 I:PSU2504 5.0 59.0 1.0
O2 I:PSU2504 5.0 59.0 1.0

Reference:

J.Pellegrino, Q.Li, D.J.Lee, A.A.Tran, R.Wang, H.A.Chaires, J.E.Park, K.Ji, D.Chow, N.Zhang, A.F.Brilot, J.T.Biel, G.Van Zundert, K.Borrelli, D.Shinabarger, C.Wolfe, B.Murray, M.P.Jacobson, O.Chesneau, I.B.Seiple, J.S.Fraser. Synthesis and Mechanism of Action of Group A Streptogramin Antibiotics That Overcome Resistance To Be Published.
Page generated: Fri Aug 2 00:12:36 2024

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