Fluorine in PDB 6pc7: E. Coli 50S Ribosome Bound to Compound 46

Fluorine Binding Sites:

The binding sites of Fluorine atom in the E. Coli 50S Ribosome Bound to Compound 46 (pdb code 6pc7). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the E. Coli 50S Ribosome Bound to Compound 46, PDB code: 6pc7:

Fluorine binding site 1 out of 1 in 6pc7

Go back to Fluorine Binding Sites List in 6pc7
Fluorine binding site 1 out of 1 in the E. Coli 50S Ribosome Bound to Compound 46


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of E. Coli 50S Ribosome Bound to Compound 46 within 5.0Å range:
probe atom residue distance (Å) B Occ
I:F3001

b:62.1
occ:1.00
F19 I:O7V3001 0.0 62.1 1.0
C54 I:O7V3001 1.3 62.1 1.0
C53 I:O7V3001 2.4 62.1 1.0
C55 I:O7V3001 2.4 62.1 1.0
C02 I:O7V3001 3.0 62.1 1.0
C06 I:O7V3001 3.1 62.1 1.0
C4' I:G2505 3.4 62.3 1.0
N07 I:O7V3001 3.5 62.1 1.0
O5' I:G2505 3.6 62.3 1.0
C5' I:G2505 3.6 62.3 1.0
C14 I:O7V3001 3.6 62.1 1.0
O3' I:G2505 3.8 62.3 1.0
C12 I:O7V3001 3.8 62.1 1.0
C13 I:O7V3001 4.1 62.1 1.0
O10 I:O7V3001 4.1 62.1 1.0
C3' I:G2505 4.2 62.3 1.0
O01 I:O7V3001 4.2 62.1 1.0
N3 I:PSU2504 4.2 59.4 1.0
C4 I:PSU2504 4.3 59.4 1.0
O4 I:PSU2504 4.4 59.4 1.0
O4' I:G2505 4.5 62.3 1.0
O2' I:G2505 4.5 62.3 1.0
C08 I:O7V3001 4.6 62.1 1.0
C47 I:O7V3001 4.7 62.1 1.0
C2 I:PSU2504 4.7 59.4 1.0
O2 I:C2452 4.7 59.4 1.0
C2' I:PSU2504 4.7 59.4 1.0
C5 I:PSU2504 4.8 59.4 1.0
N3 I:C2452 4.8 59.4 1.0
C3' I:PSU2504 4.9 59.4 1.0
C09 I:O7V3001 4.9 62.1 1.0
C2' I:G2505 5.0 62.3 1.0
P I:G2505 5.0 62.3 1.0

Reference:

J.Pellegrino, Q.Li, D.J.Lee, A.A.Tran, R.Wang, H.A.Chaires, J.E.Park, K.Ji, D.Chow, N.Zhang, A.F.Brilot, J.T.Biel, G.Van Zundert, K.Borrelli, D.Shinabarger, C.Wolfe, B.Murray, M.P.Jacobson, O.Chesneau, I.B.Seiple, J.S.Fraser. Synthesis and Mechanism of Action of Group A Streptogramin Antibiotics That Overcome Resistance To Be Published.
Page generated: Sun Dec 13 13:05:30 2020

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