Fluorine in PDB 6qee: Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar.
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar.
(pdb code 6qee). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar., PDB code: 6qee:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 6qee
Go back to
Fluorine Binding Sites List in 6qee
Fluorine binding site 1 out
of 4 in the Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar.
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1404
b:59.4
occ:1.00
|
F01
|
A:ZQU1404
|
0.0
|
59.4
|
1.0
|
C03
|
A:ZQU1404
|
1.4
|
59.4
|
1.0
|
F02
|
A:ZQU1404
|
2.2
|
59.4
|
1.0
|
C02
|
A:ZQU1404
|
2.5
|
59.4
|
1.0
|
C01
|
A:ZQU1404
|
2.5
|
59.4
|
1.0
|
C05
|
A:ZQU1404
|
2.8
|
59.4
|
1.0
|
C04
|
A:ZQU1404
|
2.9
|
59.4
|
1.0
|
C10
|
A:ZQU1404
|
3.1
|
59.4
|
1.0
|
C09
|
A:ZQU1404
|
3.3
|
59.4
|
1.0
|
CG2
|
A:ILE339
|
3.4
|
35.5
|
1.0
|
CB
|
A:LEU338
|
3.7
|
33.6
|
1.0
|
C08
|
A:ZQU1404
|
3.7
|
59.4
|
1.0
|
CG
|
A:LEU338
|
3.8
|
33.6
|
1.0
|
N
|
A:ILE339
|
3.8
|
35.5
|
1.0
|
C07
|
A:ZQU1404
|
3.8
|
59.4
|
1.0
|
CD2
|
A:LEU338
|
3.8
|
33.6
|
1.0
|
C
|
A:LEU338
|
3.9
|
33.6
|
1.0
|
CA
|
A:ILE339
|
4.0
|
35.5
|
1.0
|
CD2
|
A:PHE342
|
4.1
|
44.1
|
1.0
|
O
|
A:LEU338
|
4.1
|
33.6
|
1.0
|
C18
|
A:ZQU1404
|
4.2
|
59.4
|
1.0
|
CB
|
A:ILE339
|
4.3
|
35.5
|
1.0
|
C06
|
A:ZQU1404
|
4.4
|
59.4
|
1.0
|
C17
|
A:ZQU1404
|
4.4
|
59.4
|
1.0
|
CA
|
A:LEU338
|
4.5
|
33.6
|
1.0
|
CE2
|
A:PHE342
|
4.6
|
44.1
|
1.0
|
C14
|
A:ZQU1404
|
4.6
|
59.4
|
1.0
|
C13
|
A:ZQU1404
|
4.8
|
59.4
|
1.0
|
O
|
A:PHE335
|
4.8
|
27.6
|
1.0
|
C20
|
A:ZQU1404
|
4.9
|
59.4
|
1.0
|
OH
|
A:TYR309
|
5.0
|
34.5
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 6qee
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Fluorine Binding Sites List in 6qee
Fluorine binding site 2 out
of 4 in the Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar.
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1404
b:59.4
occ:1.00
|
F02
|
A:ZQU1404
|
0.0
|
59.4
|
1.0
|
C03
|
A:ZQU1404
|
1.4
|
59.4
|
1.0
|
F01
|
A:ZQU1404
|
2.2
|
59.4
|
1.0
|
C02
|
A:ZQU1404
|
2.5
|
59.4
|
1.0
|
C01
|
A:ZQU1404
|
2.5
|
59.4
|
1.0
|
CE2
|
A:PHE342
|
3.1
|
44.1
|
1.0
|
CD2
|
A:LEU338
|
3.3
|
33.6
|
1.0
|
CD2
|
A:PHE342
|
3.3
|
44.1
|
1.0
|
CG
|
A:LEU338
|
3.4
|
33.6
|
1.0
|
C05
|
A:ZQU1404
|
3.7
|
59.4
|
1.0
|
C04
|
A:ZQU1404
|
3.8
|
59.4
|
1.0
|
OH
|
A:TYR309
|
3.8
|
34.5
|
1.0
|
C10
|
A:ZQU1404
|
4.0
|
59.4
|
1.0
|
CB
|
A:LEU338
|
4.2
|
33.6
|
1.0
|
C09
|
A:ZQU1404
|
4.2
|
59.4
|
1.0
|
CZ
|
A:PHE342
|
4.3
|
44.1
|
1.0
|
CD1
|
A:ILE305
|
4.3
|
39.9
|
1.0
|
CG1
|
A:ILE305
|
4.4
|
39.9
|
1.0
|
CE1
|
A:TYR309
|
4.5
|
34.5
|
1.0
|
CG2
|
A:ILE305
|
4.5
|
39.9
|
1.0
|
CG
|
A:PHE342
|
4.5
|
44.1
|
1.0
|
CD1
|
A:LEU338
|
4.5
|
33.6
|
1.0
|
CZ
|
A:TYR309
|
4.6
|
34.5
|
1.0
|
O
|
A:LEU338
|
4.8
|
33.6
|
1.0
|
C08
|
A:ZQU1404
|
4.8
|
59.4
|
1.0
|
C
|
A:LEU338
|
4.8
|
33.6
|
1.0
|
C07
|
A:ZQU1404
|
4.9
|
59.4
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 6qee
Go back to
Fluorine Binding Sites List in 6qee
Fluorine binding site 3 out
of 4 in the Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar.
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1405
b:59.4
occ:1.00
|
F01
|
A:ZQU1405
|
0.0
|
59.4
|
1.0
|
C03
|
A:ZQU1405
|
1.4
|
59.4
|
1.0
|
F02
|
A:ZQU1405
|
2.2
|
59.4
|
1.0
|
C02
|
A:ZQU1405
|
2.5
|
59.4
|
1.0
|
C01
|
A:ZQU1405
|
2.5
|
59.4
|
1.0
|
C05
|
A:ZQU1405
|
2.9
|
59.4
|
1.0
|
C04
|
A:ZQU1405
|
2.9
|
59.4
|
1.0
|
C10
|
A:ZQU1405
|
3.1
|
59.4
|
1.0
|
C09
|
A:ZQU1405
|
3.2
|
59.4
|
1.0
|
NE1
|
A:TRP231
|
3.2
|
59.3
|
1.0
|
CD1
|
A:TRP231
|
3.6
|
59.3
|
1.0
|
C08
|
A:ZQU1405
|
3.8
|
59.4
|
1.0
|
C07
|
A:ZQU1405
|
3.8
|
59.4
|
1.0
|
CE2
|
A:TRP231
|
4.2
|
59.3
|
1.0
|
C18
|
A:ZQU1405
|
4.2
|
59.4
|
1.0
|
C17
|
A:ZQU1405
|
4.2
|
59.4
|
1.0
|
C06
|
A:ZQU1405
|
4.5
|
59.4
|
1.0
|
CE1
|
A:PHE302
|
4.6
|
46.3
|
1.0
|
CG
|
A:TRP231
|
4.7
|
59.3
|
1.0
|
C14
|
A:ZQU1405
|
4.7
|
59.4
|
1.0
|
C13
|
A:ZQU1405
|
4.7
|
59.4
|
1.0
|
CZ2
|
A:TRP231
|
4.8
|
59.3
|
1.0
|
C20
|
A:ZQU1405
|
4.9
|
59.4
|
1.0
|
C19
|
A:ZQU1405
|
4.9
|
59.4
|
1.0
|
CD1
|
A:ILE305
|
4.9
|
39.9
|
1.0
|
CD2
|
A:TRP231
|
5.0
|
59.3
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 6qee
Go back to
Fluorine Binding Sites List in 6qee
Fluorine binding site 4 out
of 4 in the Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar.
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Nanodisc Reconstituted Human-Mouse Chimeric ABCB1 (ABCB1HM)-Eq Mutant in Complex with UIC2 Fab and Zosuquidar. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F1405
b:59.4
occ:1.00
|
F02
|
A:ZQU1405
|
0.0
|
59.4
|
1.0
|
C03
|
A:ZQU1405
|
1.4
|
59.4
|
1.0
|
F01
|
A:ZQU1405
|
2.2
|
59.4
|
1.0
|
C01
|
A:ZQU1405
|
2.5
|
59.4
|
1.0
|
C02
|
A:ZQU1405
|
2.5
|
59.4
|
1.0
|
CD1
|
A:ILE305
|
3.3
|
39.9
|
1.0
|
C04
|
A:ZQU1405
|
3.7
|
59.4
|
1.0
|
C05
|
A:ZQU1405
|
3.7
|
59.4
|
1.0
|
C01
|
A:ZQU1404
|
4.0
|
59.4
|
1.0
|
C09
|
A:ZQU1405
|
4.0
|
59.4
|
1.0
|
C10
|
A:ZQU1405
|
4.1
|
59.4
|
1.0
|
CE2
|
A:PHE342
|
4.2
|
44.1
|
1.0
|
CD2
|
A:PHE342
|
4.2
|
44.1
|
1.0
|
C04
|
A:ZQU1404
|
4.4
|
59.4
|
1.0
|
CE1
|
A:PHE302
|
4.5
|
46.3
|
1.0
|
CG1
|
A:ILE305
|
4.6
|
39.9
|
1.0
|
C09
|
A:ZQU1404
|
4.6
|
59.4
|
1.0
|
C07
|
A:ZQU1405
|
4.9
|
59.4
|
1.0
|
C08
|
A:ZQU1405
|
4.9
|
59.4
|
1.0
|
|
Reference:
A.Alam,
J.Kowal,
E.Broude,
I.Roninson,
K.P.Locher.
Structural Insight Into Substrate and Inhibitor Discrimination By Human P-Glycoprotein. Science V. 363 753 2019.
ISSN: ESSN 1095-9203
PubMed: 30765569
DOI: 10.1126/SCIENCE.AAV7102
Page generated: Fri Aug 2 00:47:54 2024
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