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Fluorine in PDB 6rz6: Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group)

Protein crystallography data

The structure of Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group), PDB code: 6rz6 was solved by A.Gusach, A.Luginina, E.Marin, R.L.Brouillette, E.Besserer-Offroy, J.M.Longpre, A.Ishchenko, P.Popov, T.Fujimoto, T.Maruyama, B.Stauch, M.Ergasheva, D.Romanovskaya, A.Stepko, K.Kovalev, M.Shevtsov, V.Gordeliy, G.W.Han, P.Sarret, V.Katritch, V.Borshchevskiy, A.Mishin, V.Cherezov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.90 / 2.43
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 69.810, 170.880, 85.790, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 23.2

Other elements in 6rz6:

The structure of Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group) also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group) (pdb code 6rz6). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group), PDB code: 6rz6:

Fluorine binding site 1 out of 1 in 6rz6

Go back to Fluorine Binding Sites List in 6rz6
Fluorine binding site 1 out of 1 in the Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the Human Cysteinyl Leukotriene Receptor 2 in Complex with Ono-2570366 (C2221 Space Group) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F2001

b:45.6
occ:1.00
F1 A:KNW2001 0.0 45.6 1.0
C24 A:KNW2001 1.4 48.4 1.0
C25 A:KNW2001 2.3 46.9 1.0
C23 A:KNW2001 2.4 42.3 1.0
CB A:TYR123 3.2 36.7 1.0
C26 A:KNW2001 3.6 45.3 1.0
C22 A:KNW2001 3.6 41.3 1.0
CG A:TYR123 3.7 39.2 1.0
CE2 A:TYR127 3.7 48.8 1.0
C14 A:OLC2015 3.8 55.9 1.0
CA A:GLY209 3.8 44.0 1.0
CD1 A:TYR123 3.9 36.3 1.0
C27 A:KNW2001 4.1 43.3 1.0
CD2 A:TYR127 4.1 47.5 1.0
CG1 A:ILE166 4.1 46.8 1.0
CD1 A:ILE166 4.4 47.6 1.0
C15 A:OLC2015 4.5 67.0 1.0
CA A:TYR123 4.5 50.0 1.0
CD2 A:TYR123 4.5 39.2 1.0
N A:GLY209 4.6 42.6 1.0
CZ A:TYR127 4.7 48.9 1.0
O A:VAL208 4.7 40.5 1.0
O A:TYR123 4.8 48.5 1.0
C A:TYR123 4.8 52.3 1.0
C13 A:OLC2015 4.9 53.9 1.0
CE1 A:TYR123 4.9 34.7 1.0
C21 A:KNW2001 4.9 41.9 1.0
C A:VAL208 4.9 44.1 1.0
C A:GLY209 5.0 45.3 1.0
OH A:TYR127 5.0 46.6 1.0
O A:GLY209 5.0 46.3 1.0
CG2 A:ILE166 5.0 39.0 1.0

Reference:

A.Gusach, A.Luginina, E.Marin, R.L.Brouillette, E.Besserer-Offroy, J.M.Longpre, A.Ishchenko, P.Popov, N.Patel, T.Fujimoto, T.Maruyama, B.Stauch, M.Ergasheva, D.Romanovskaia, A.Stepko, K.Kovalev, M.Shevtsov, V.Gordeliy, G.W.Han, V.Katritch, V.Borshchevskiy, P.Sarret, A.Mishin, V.Cherezov. Structural Basis of Ligand Selectivity and Disease Mutations in Cysteinyl Leukotriene Receptors. Nat Commun V. 10 5573 2019.
ISSN: ESSN 2041-1723
PubMed: 31811124
DOI: 10.1038/S41467-019-13348-2
Page generated: Fri Aug 2 01:28:36 2024

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